Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06305 and CA264_06310 overlap by 4 nucleotides CA264_06310 and CA264_06315 are separated by 2 nucleotides CA264_06315 and CA264_06320 are separated by 62 nucleotides
CA264_06305: CA264_06305 - pH homeostasis protein A, at 1,466,633 to 1,468,942
_06305
CA264_06310: CA264_06310 - cation:proton antiporter, at 1,468,939 to 1,469,481
_06310
CA264_06315: CA264_06315 - cation:proton antiporter, at 1,469,484 to 1,469,840
_06315
CA264_06320: CA264_06320 - Na+/H+ antiporter subunit D, at 1,469,903 to 1,471,420
_06320
Position (kb)
1469
1470 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1468.547 kb on + strand, within CA264_06305 at 1468.650 kb on + strand, within CA264_06305 at 1468.650 kb on + strand, within CA264_06305 at 1468.651 kb on - strand, within CA264_06305 at 1468.651 kb on - strand, within CA264_06305 at 1468.651 kb on - strand, within CA264_06305 at 1468.653 kb on - strand, within CA264_06305 at 1468.669 kb on + strand, within CA264_06305 at 1468.669 kb on + strand, within CA264_06305 at 1468.721 kb on + strand at 1468.721 kb on + strand at 1468.721 kb on + strand at 1468.721 kb on + strand at 1468.722 kb on - strand at 1468.722 kb on - strand at 1468.725 kb on + strand at 1468.725 kb on + strand at 1468.726 kb on - strand at 1468.726 kb on - strand at 1468.726 kb on - strand at 1468.726 kb on - strand at 1468.772 kb on + strand at 1468.790 kb on + strand at 1468.791 kb on - strand at 1468.814 kb on - strand at 1468.866 kb on + strand at 1468.875 kb on + strand at 1469.005 kb on + strand, within CA264_06310 at 1469.006 kb on - strand, within CA264_06310 at 1469.110 kb on - strand, within CA264_06310 at 1469.110 kb on - strand, within CA264_06310 at 1469.143 kb on + strand, within CA264_06310 at 1469.144 kb on - strand, within CA264_06310 at 1469.144 kb on - strand, within CA264_06310 at 1469.275 kb on + strand, within CA264_06310 at 1469.276 kb on - strand, within CA264_06310 at 1469.280 kb on - strand, within CA264_06310 at 1469.344 kb on + strand, within CA264_06310 at 1469.344 kb on + strand, within CA264_06310 at 1469.344 kb on + strand, within CA264_06310 at 1469.344 kb on + strand, within CA264_06310 at 1469.344 kb on + strand, within CA264_06310 at 1469.345 kb on - strand, within CA264_06310 at 1469.345 kb on - strand, within CA264_06310 at 1469.385 kb on - strand, within CA264_06310 at 1469.451 kb on + strand at 1469.451 kb on + strand at 1469.491 kb on + strand at 1469.536 kb on - strand, within CA264_06315 at 1469.542 kb on + strand, within CA264_06315 at 1469.569 kb on + strand, within CA264_06315 at 1469.630 kb on + strand, within CA264_06315 at 1469.654 kb on - strand, within CA264_06315 at 1469.685 kb on + strand, within CA264_06315 at 1469.685 kb on + strand, within CA264_06315 at 1469.724 kb on - strand, within CA264_06315 at 1469.789 kb on + strand, within CA264_06315 at 1469.790 kb on - strand, within CA264_06315 at 1469.838 kb on + strand at 1469.885 kb on + strand at 1469.892 kb on - strand at 1469.902 kb on + strand at 1469.903 kb on - strand at 1469.938 kb on + strand at 1469.939 kb on - strand at 1469.948 kb on + strand at 1470.091 kb on - strand, within CA264_06320 at 1470.119 kb on - strand, within CA264_06320 at 1470.234 kb on - strand, within CA264_06320 at 1470.305 kb on + strand, within CA264_06320 at 1470.305 kb on + strand, within CA264_06320 at 1470.306 kb on - strand, within CA264_06320 at 1470.306 kb on - strand, within CA264_06320 at 1470.306 kb on - strand, within CA264_06320 at 1470.321 kb on + strand, within CA264_06320 at 1470.393 kb on - strand, within CA264_06320 at 1470.447 kb on + strand, within CA264_06320 at 1470.447 kb on + strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.449 kb on + strand, within CA264_06320 at 1470.449 kb on + strand, within CA264_06320 at 1470.528 kb on + strand, within CA264_06320 at 1470.532 kb on + strand, within CA264_06320 at 1470.533 kb on - strand, within CA264_06320 at 1470.533 kb on - strand, within CA264_06320 at 1470.611 kb on + strand, within CA264_06320 at 1470.626 kb on - strand, within CA264_06320 at 1470.643 kb on + strand, within CA264_06320 at 1470.655 kb on + strand, within CA264_06320 at 1470.677 kb on - strand, within CA264_06320 at 1470.724 kb on + strand, within CA264_06320 at 1470.725 kb on - strand, within CA264_06320 at 1470.725 kb on - strand, within CA264_06320 at 1470.725 kb on - strand, within CA264_06320
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 1,468,547 + CA264_06305 0.83 +0.3 1,468,650 + CA264_06305 0.87 +2.4 1,468,650 + CA264_06305 0.87 -0.9 1,468,651 - CA264_06305 0.87 +0.2 1,468,651 - CA264_06305 0.87 -0.7 1,468,651 - CA264_06305 0.87 -0.4 1,468,653 - CA264_06305 0.87 +0.8 1,468,669 + CA264_06305 0.88 -0.2 1,468,669 + CA264_06305 0.88 +1.3 1,468,721 + +1.3 1,468,721 + -0.4 1,468,721 + +0.4 1,468,721 + +0.1 1,468,722 - -0.3 1,468,722 - -0.9 1,468,725 + +0.3 1,468,725 + +0.3 1,468,726 - +0.8 1,468,726 - -0.6 1,468,726 - +0.3 1,468,726 - +0.6 1,468,772 + +2.0 1,468,790 + +0.2 1,468,791 - +0.2 1,468,814 - +1.4 1,468,866 + +0.8 1,468,875 + -0.3 1,469,005 + CA264_06310 0.12 -0.2 1,469,006 - CA264_06310 0.12 -0.1 1,469,110 - CA264_06310 0.31 -1.7 1,469,110 - CA264_06310 0.31 -0.5 1,469,143 + CA264_06310 0.38 +0.6 1,469,144 - CA264_06310 0.38 -0.5 1,469,144 - CA264_06310 0.38 -0.3 1,469,275 + CA264_06310 0.62 +0.3 1,469,276 - CA264_06310 0.62 -0.6 1,469,280 - CA264_06310 0.63 +0.3 1,469,344 + CA264_06310 0.75 +0.3 1,469,344 + CA264_06310 0.75 -1.1 1,469,344 + CA264_06310 0.75 +0.0 1,469,344 + CA264_06310 0.75 +0.1 1,469,344 + CA264_06310 0.75 +0.4 1,469,345 - CA264_06310 0.75 -0.1 1,469,345 - CA264_06310 0.75 +0.1 1,469,385 - CA264_06310 0.82 -0.1 1,469,451 + -0.8 1,469,451 + +0.0 1,469,491 + -1.3 1,469,536 - CA264_06315 0.15 +1.2 1,469,542 + CA264_06315 0.16 +0.4 1,469,569 + CA264_06315 0.24 +1.3 1,469,630 + CA264_06315 0.41 +0.1 1,469,654 - CA264_06315 0.48 +0.5 1,469,685 + CA264_06315 0.56 +0.5 1,469,685 + CA264_06315 0.56 -2.0 1,469,724 - CA264_06315 0.67 -0.2 1,469,789 + CA264_06315 0.85 +0.5 1,469,790 - CA264_06315 0.86 -0.4 1,469,838 + -0.4 1,469,885 + +1.0 1,469,892 - -0.2 1,469,902 + +0.9 1,469,903 - +0.2 1,469,938 + -0.2 1,469,939 - +0.1 1,469,948 + +0.8 1,470,091 - CA264_06320 0.12 +2.7 1,470,119 - CA264_06320 0.14 -0.2 1,470,234 - CA264_06320 0.22 +1.2 1,470,305 + CA264_06320 0.26 +0.3 1,470,305 + CA264_06320 0.26 -0.0 1,470,306 - CA264_06320 0.27 -0.4 1,470,306 - CA264_06320 0.27 -0.1 1,470,306 - CA264_06320 0.27 -0.3 1,470,321 + CA264_06320 0.28 -0.1 1,470,393 - CA264_06320 0.32 +0.9 1,470,447 + CA264_06320 0.36 +1.1 1,470,447 + CA264_06320 0.36 -0.2 1,470,448 - CA264_06320 0.36 -0.1 1,470,448 - CA264_06320 0.36 +0.1 1,470,448 - CA264_06320 0.36 -0.4 1,470,448 - CA264_06320 0.36 -0.2 1,470,448 - CA264_06320 0.36 -0.2 1,470,448 - CA264_06320 0.36 +1.4 1,470,448 - CA264_06320 0.36 +0.2 1,470,449 + CA264_06320 0.36 -0.0 1,470,449 + CA264_06320 0.36 +0.9 1,470,528 + CA264_06320 0.41 +0.1 1,470,532 + CA264_06320 0.41 -0.0 1,470,533 - CA264_06320 0.42 -0.7 1,470,533 - CA264_06320 0.42 +0.7 1,470,611 + CA264_06320 0.47 +0.2 1,470,626 - CA264_06320 0.48 +1.1 1,470,643 + CA264_06320 0.49 +0.2 1,470,655 + CA264_06320 0.50 +1.0 1,470,677 - CA264_06320 0.51 -0.1 1,470,724 + CA264_06320 0.54 +0.0 1,470,725 - CA264_06320 0.54 +1.2 1,470,725 - CA264_06320 0.54 +0.8 1,470,725 - CA264_06320 0.54 +1.0
Or see this region's nucleotide sequence