Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06275 and CA264_06280 are separated by 910 nucleotides CA264_06280 and CA264_06285 overlap by 61 nucleotides CA264_06285 and CA264_06290 are separated by 1 nucleotides
CA264_06275: CA264_06275 - chloride channel protein, at 1,459,327 to 1,460,670
_06275
CA264_06280: CA264_06280 - sodium:solute symporter, at 1,461,581 to 1,463,320
_06280
CA264_06285: CA264_06285 - N-acetyltransferase, at 1,463,260 to 1,463,712
_06285
CA264_06290: CA264_06290 - amino-acid racemase, at 1,463,714 to 1,464,787
_06290
Position (kb)
1461
1462
1463
1464 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1460.687 kb on + strand at 1460.688 kb on - strand at 1460.688 kb on - strand at 1460.703 kb on + strand at 1460.704 kb on - strand at 1460.705 kb on + strand at 1460.706 kb on - strand at 1460.706 kb on - strand at 1460.764 kb on + strand at 1460.790 kb on - strand at 1460.860 kb on + strand at 1460.963 kb on + strand at 1460.963 kb on + strand at 1461.013 kb on + strand at 1461.015 kb on + strand at 1461.015 kb on + strand at 1461.026 kb on + strand at 1461.027 kb on - strand at 1461.066 kb on - strand at 1461.068 kb on + strand at 1461.069 kb on - strand at 1461.075 kb on - strand at 1461.117 kb on + strand at 1461.117 kb on + strand at 1461.137 kb on - strand at 1461.188 kb on + strand at 1461.237 kb on + strand at 1461.244 kb on - strand at 1461.244 kb on - strand at 1461.272 kb on + strand at 1461.272 kb on + strand at 1461.276 kb on + strand at 1461.277 kb on - strand at 1461.371 kb on + strand at 1461.372 kb on - strand at 1461.372 kb on - strand at 1461.375 kb on - strand at 1461.375 kb on - strand at 1461.379 kb on - strand at 1461.515 kb on + strand at 1461.516 kb on - strand at 1461.535 kb on - strand at 1461.568 kb on - strand at 1461.587 kb on + strand at 1461.587 kb on + strand at 1461.598 kb on - strand at 1461.615 kb on - strand at 1461.678 kb on - strand at 1461.678 kb on - strand at 1461.680 kb on + strand at 1461.681 kb on - strand at 1461.681 kb on - strand at 1461.681 kb on - strand at 1461.681 kb on - strand at 1461.681 kb on - strand at 1461.681 kb on - strand at 1461.681 kb on - strand at 1461.684 kb on + strand at 1461.712 kb on + strand at 1461.713 kb on - strand at 1461.729 kb on + strand at 1461.741 kb on + strand at 1461.742 kb on - strand at 1461.825 kb on + strand, within CA264_06280 at 1461.825 kb on + strand, within CA264_06280 at 1461.826 kb on - strand, within CA264_06280 at 1461.826 kb on - strand, within CA264_06280 at 1461.925 kb on + strand, within CA264_06280 at 1461.971 kb on + strand, within CA264_06280 at 1461.997 kb on - strand, within CA264_06280 at 1462.085 kb on + strand, within CA264_06280 at 1462.085 kb on + strand, within CA264_06280 at 1462.085 kb on + strand, within CA264_06280 at 1462.086 kb on - strand, within CA264_06280 at 1462.118 kb on + strand, within CA264_06280 at 1462.118 kb on + strand, within CA264_06280 at 1462.118 kb on + strand, within CA264_06280 at 1462.118 kb on + strand, within CA264_06280 at 1462.119 kb on - strand, within CA264_06280 at 1462.121 kb on - strand, within CA264_06280 at 1462.126 kb on + strand, within CA264_06280 at 1462.227 kb on + strand, within CA264_06280 at 1462.228 kb on - strand, within CA264_06280 at 1462.231 kb on - strand, within CA264_06280 at 1462.262 kb on - strand, within CA264_06280 at 1462.267 kb on + strand, within CA264_06280 at 1462.267 kb on + strand, within CA264_06280 at 1462.400 kb on + strand, within CA264_06280 at 1462.400 kb on + strand, within CA264_06280 at 1462.401 kb on - strand, within CA264_06280 at 1462.401 kb on - strand, within CA264_06280 at 1462.401 kb on - strand, within CA264_06280 at 1462.401 kb on - strand, within CA264_06280 at 1462.525 kb on + strand, within CA264_06280 at 1462.558 kb on - strand, within CA264_06280 at 1462.558 kb on - strand, within CA264_06280 at 1462.647 kb on + strand, within CA264_06280 at 1462.767 kb on + strand, within CA264_06280 at 1462.767 kb on + strand, within CA264_06280 at 1462.807 kb on + strand, within CA264_06280 at 1462.808 kb on - strand, within CA264_06280 at 1462.938 kb on + strand, within CA264_06280 at 1463.104 kb on + strand, within CA264_06280 at 1463.104 kb on + strand, within CA264_06280 at 1463.104 kb on + strand, within CA264_06280 at 1463.120 kb on - strand, within CA264_06280 at 1463.122 kb on + strand, within CA264_06280 at 1463.123 kb on - strand, within CA264_06280 at 1463.127 kb on + strand, within CA264_06280 at 1463.127 kb on + strand, within CA264_06280 at 1463.127 kb on + strand, within CA264_06280 at 1463.127 kb on + strand, within CA264_06280 at 1463.128 kb on - strand, within CA264_06280 at 1463.132 kb on - strand, within CA264_06280 at 1463.132 kb on - strand, within CA264_06280 at 1463.213 kb on + strand at 1463.213 kb on + strand at 1463.214 kb on - strand at 1463.229 kb on + strand at 1463.229 kb on + strand at 1463.230 kb on - strand at 1463.232 kb on + strand at 1463.232 kb on + strand at 1463.233 kb on - strand at 1463.234 kb on + strand at 1463.334 kb on - strand, within CA264_06285 at 1463.404 kb on + strand, within CA264_06285 at 1463.472 kb on - strand, within CA264_06285 at 1463.660 kb on - strand, within CA264_06285 at 1463.687 kb on - strand at 1463.687 kb on - strand at 1463.696 kb on - strand at 1463.697 kb on + strand at 1463.702 kb on + strand at 1463.703 kb on - strand at 1463.725 kb on - strand at 1463.745 kb on + strand at 1463.745 kb on + strand at 1463.745 kb on + strand at 1463.780 kb on - strand at 1463.940 kb on - strand, within CA264_06290 at 1463.941 kb on + strand, within CA264_06290 at 1463.942 kb on - strand, within CA264_06290 at 1463.944 kb on - strand, within CA264_06290 at 1463.977 kb on + strand, within CA264_06290 at 1463.979 kb on + strand, within CA264_06290 at 1463.979 kb on + strand, within CA264_06290 at 1463.980 kb on - strand, within CA264_06290 at 1463.980 kb on - strand, within CA264_06290 at 1463.984 kb on + strand, within CA264_06290 at 1464.191 kb on - strand, within CA264_06290 at 1464.191 kb on - strand, within CA264_06290 at 1464.237 kb on + strand, within CA264_06290 at 1464.237 kb on + strand, within CA264_06290 at 1464.237 kb on + strand, within CA264_06290 at 1464.246 kb on - strand, within CA264_06290
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 1,460,687 + -0.1 1,460,688 - +0.5 1,460,688 - +0.4 1,460,703 + -0.8 1,460,704 - -0.1 1,460,705 + +0.5 1,460,706 - -0.3 1,460,706 - -1.7 1,460,764 + +1.0 1,460,790 - -0.8 1,460,860 + -0.6 1,460,963 + +0.9 1,460,963 + +0.9 1,461,013 + -0.6 1,461,015 + -0.3 1,461,015 + -0.1 1,461,026 + +0.5 1,461,027 - -0.1 1,461,066 - +0.5 1,461,068 + -0.3 1,461,069 - -0.1 1,461,075 - +0.5 1,461,117 + -0.3 1,461,117 + +0.5 1,461,137 - +0.1 1,461,188 + +0.2 1,461,237 + -0.5 1,461,244 - +0.9 1,461,244 - +0.2 1,461,272 + +0.1 1,461,272 + +1.2 1,461,276 + -0.5 1,461,277 - -0.0 1,461,371 + +0.4 1,461,372 - +0.1 1,461,372 - +1.2 1,461,375 - -0.1 1,461,375 - +0.2 1,461,379 - -0.2 1,461,515 + +0.3 1,461,516 - -0.4 1,461,535 - +0.4 1,461,568 - -0.3 1,461,587 + +0.4 1,461,587 + +0.2 1,461,598 - +0.2 1,461,615 - -0.2 1,461,678 - -0.4 1,461,678 - -0.5 1,461,680 + +1.0 1,461,681 - -0.2 1,461,681 - -0.1 1,461,681 - -0.1 1,461,681 - -0.5 1,461,681 - +1.2 1,461,681 - -1.2 1,461,681 - +1.3 1,461,684 + +0.7 1,461,712 + +0.1 1,461,713 - -0.2 1,461,729 + +0.0 1,461,741 + +0.6 1,461,742 - -0.0 1,461,825 + CA264_06280 0.14 +0.6 1,461,825 + CA264_06280 0.14 +0.5 1,461,826 - CA264_06280 0.14 -0.3 1,461,826 - CA264_06280 0.14 -1.0 1,461,925 + CA264_06280 0.20 +0.1 1,461,971 + CA264_06280 0.22 -0.4 1,461,997 - CA264_06280 0.24 -0.0 1,462,085 + CA264_06280 0.29 -0.5 1,462,085 + CA264_06280 0.29 -0.3 1,462,085 + CA264_06280 0.29 +0.6 1,462,086 - CA264_06280 0.29 +0.9 1,462,118 + CA264_06280 0.31 +0.7 1,462,118 + CA264_06280 0.31 -0.1 1,462,118 + CA264_06280 0.31 +0.3 1,462,118 + CA264_06280 0.31 -0.3 1,462,119 - CA264_06280 0.31 +0.0 1,462,121 - CA264_06280 0.31 -0.1 1,462,126 + CA264_06280 0.31 -0.3 1,462,227 + CA264_06280 0.37 -1.1 1,462,228 - CA264_06280 0.37 -2.4 1,462,231 - CA264_06280 0.37 +0.4 1,462,262 - CA264_06280 0.39 +0.2 1,462,267 + CA264_06280 0.39 +0.1 1,462,267 + CA264_06280 0.39 +0.0 1,462,400 + CA264_06280 0.47 -0.5 1,462,400 + CA264_06280 0.47 +1.5 1,462,401 - CA264_06280 0.47 +0.2 1,462,401 - CA264_06280 0.47 +0.6 1,462,401 - CA264_06280 0.47 +0.1 1,462,401 - CA264_06280 0.47 +0.3 1,462,525 + CA264_06280 0.54 -0.6 1,462,558 - CA264_06280 0.56 +0.5 1,462,558 - CA264_06280 0.56 -0.3 1,462,647 + CA264_06280 0.61 -0.5 1,462,767 + CA264_06280 0.68 -0.5 1,462,767 + CA264_06280 0.68 -0.7 1,462,807 + CA264_06280 0.70 +0.4 1,462,808 - CA264_06280 0.71 -0.1 1,462,938 + CA264_06280 0.78 -0.3 1,463,104 + CA264_06280 0.88 +0.4 1,463,104 + CA264_06280 0.88 +0.2 1,463,104 + CA264_06280 0.88 -0.2 1,463,120 - CA264_06280 0.88 -0.2 1,463,122 + CA264_06280 0.89 -0.1 1,463,123 - CA264_06280 0.89 -0.3 1,463,127 + CA264_06280 0.89 -0.3 1,463,127 + CA264_06280 0.89 +0.1 1,463,127 + CA264_06280 0.89 +0.2 1,463,127 + CA264_06280 0.89 -0.3 1,463,128 - CA264_06280 0.89 +0.9 1,463,132 - CA264_06280 0.89 -0.1 1,463,132 - CA264_06280 0.89 +0.3 1,463,213 + -0.1 1,463,213 + -0.0 1,463,214 - +0.2 1,463,229 + -1.8 1,463,229 + -1.7 1,463,230 - -0.8 1,463,232 + -0.2 1,463,232 + +1.2 1,463,233 - -0.1 1,463,234 + +0.5 1,463,334 - CA264_06285 0.16 -0.6 1,463,404 + CA264_06285 0.32 -1.8 1,463,472 - CA264_06285 0.47 -2.0 1,463,660 - CA264_06285 0.88 -0.4 1,463,687 - -0.3 1,463,687 - -0.5 1,463,696 - +1.4 1,463,697 + -1.1 1,463,702 + +0.1 1,463,703 - -2.5 1,463,725 - -1.7 1,463,745 + -0.0 1,463,745 + -0.5 1,463,745 + -2.4 1,463,780 - -1.3 1,463,940 - CA264_06290 0.21 -0.7 1,463,941 + CA264_06290 0.21 -0.2 1,463,942 - CA264_06290 0.21 -2.3 1,463,944 - CA264_06290 0.21 +0.2 1,463,977 + CA264_06290 0.24 -1.9 1,463,979 + CA264_06290 0.25 -0.8 1,463,979 + CA264_06290 0.25 -1.4 1,463,980 - CA264_06290 0.25 -0.2 1,463,980 - CA264_06290 0.25 +2.4 1,463,984 + CA264_06290 0.25 -0.9 1,464,191 - CA264_06290 0.44 -2.1 1,464,191 - CA264_06290 0.44 -0.4 1,464,237 + CA264_06290 0.49 -0.4 1,464,237 + CA264_06290 0.49 +0.1 1,464,237 + CA264_06290 0.49 -0.9 1,464,246 - CA264_06290 0.50 -0.3
Or see this region's nucleotide sequence