Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06215 and CA264_06220 are separated by 182 nucleotides CA264_06220 and CA264_06225 are separated by 21 nucleotides CA264_06225 and CA264_06230 are separated by 49 nucleotides
CA264_06215: CA264_06215 - peptidase-C39 like family protein, at 1,446,983 to 1,447,705
_06215
CA264_06220: CA264_06220 - hypothetical protein, at 1,447,888 to 1,448,574
_06220
CA264_06225: CA264_06225 - argininosuccinate lyase, at 1,448,596 to 1,449,933
_06225
CA264_06230: CA264_06230 - acetylornithine deacetylase, at 1,449,983 to 1,451,059
_06230
Position (kb)
1448
1449
1450 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1447.624 kb on + strand, within CA264_06215 at 1447.624 kb on + strand, within CA264_06215 at 1447.635 kb on + strand at 1447.689 kb on - strand at 1447.712 kb on + strand at 1447.713 kb on - strand at 1447.732 kb on + strand at 1447.732 kb on + strand at 1447.732 kb on + strand at 1447.860 kb on + strand at 1447.862 kb on + strand at 1447.908 kb on - strand at 1448.023 kb on + strand, within CA264_06220 at 1448.024 kb on - strand, within CA264_06220 at 1448.074 kb on + strand, within CA264_06220 at 1448.202 kb on + strand, within CA264_06220 at 1448.202 kb on + strand, within CA264_06220 at 1448.286 kb on - strand, within CA264_06220 at 1448.332 kb on + strand, within CA264_06220 at 1448.547 kb on + strand at 1448.548 kb on - strand at 1448.582 kb on + strand at 1448.582 kb on + strand at 1448.583 kb on - strand at 1448.592 kb on + strand at 1448.592 kb on + strand at 1448.592 kb on + strand at 1448.597 kb on + strand at 1448.621 kb on + strand at 1448.761 kb on + strand, within CA264_06225 at 1448.761 kb on + strand, within CA264_06225 at 1448.762 kb on - strand, within CA264_06225 at 1448.783 kb on + strand, within CA264_06225 at 1448.846 kb on + strand, within CA264_06225 at 1448.847 kb on - strand, within CA264_06225 at 1448.850 kb on + strand, within CA264_06225 at 1448.851 kb on - strand, within CA264_06225 at 1448.852 kb on + strand, within CA264_06225 at 1448.853 kb on - strand, within CA264_06225 at 1448.903 kb on + strand at 1448.904 kb on - strand, within CA264_06225 at 1449.158 kb on + strand, within CA264_06225 at 1449.199 kb on + strand, within CA264_06225 at 1449.222 kb on - strand, within CA264_06225 at 1449.225 kb on + strand, within CA264_06225 at 1449.258 kb on - strand, within CA264_06225 at 1449.258 kb on - strand, within CA264_06225 at 1449.270 kb on - strand, within CA264_06225 at 1449.270 kb on - strand, within CA264_06225 at 1449.406 kb on + strand, within CA264_06225 at 1449.406 kb on + strand, within CA264_06225 at 1449.407 kb on - strand, within CA264_06225 at 1449.474 kb on + strand, within CA264_06225 at 1449.474 kb on + strand, within CA264_06225 at 1449.475 kb on - strand, within CA264_06225 at 1449.554 kb on - strand, within CA264_06225 at 1449.748 kb on + strand, within CA264_06225 at 1449.950 kb on - strand at 1450.030 kb on + strand at 1450.247 kb on + strand, within CA264_06230 at 1450.297 kb on + strand, within CA264_06230 at 1450.299 kb on + strand, within CA264_06230 at 1450.299 kb on + strand, within CA264_06230 at 1450.300 kb on - strand, within CA264_06230 at 1450.431 kb on + strand, within CA264_06230 at 1450.432 kb on - strand, within CA264_06230 at 1450.451 kb on - strand, within CA264_06230 at 1450.663 kb on + strand, within CA264_06230 at 1450.684 kb on - strand, within CA264_06230 at 1450.684 kb on - strand, within CA264_06230 at 1450.684 kb on - strand, within CA264_06230 at 1450.704 kb on + strand, within CA264_06230 at 1450.705 kb on - strand, within CA264_06230 at 1450.705 kb on - strand, within CA264_06230 at 1450.705 kb on - strand, within CA264_06230 at 1450.707 kb on + strand, within CA264_06230 at 1450.708 kb on - strand, within CA264_06230 at 1450.816 kb on - strand, within CA264_06230
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 1,447,624 + CA264_06215 0.89 -0.1 1,447,624 + CA264_06215 0.89 -0.3 1,447,635 + -0.0 1,447,689 - +0.8 1,447,712 + +0.4 1,447,713 - -0.3 1,447,732 + +0.2 1,447,732 + -0.1 1,447,732 + -0.1 1,447,860 + -0.0 1,447,862 + -0.2 1,447,908 - +0.3 1,448,023 + CA264_06220 0.20 -0.3 1,448,024 - CA264_06220 0.20 +0.6 1,448,074 + CA264_06220 0.27 -1.4 1,448,202 + CA264_06220 0.46 -0.8 1,448,202 + CA264_06220 0.46 -0.2 1,448,286 - CA264_06220 0.58 -0.1 1,448,332 + CA264_06220 0.65 -0.6 1,448,547 + +0.5 1,448,548 - -0.3 1,448,582 + -1.4 1,448,582 + -0.3 1,448,583 - +0.5 1,448,592 + -0.1 1,448,592 + -1.0 1,448,592 + -1.9 1,448,597 + -0.5 1,448,621 + +1.8 1,448,761 + CA264_06225 0.12 +0.9 1,448,761 + CA264_06225 0.12 +0.2 1,448,762 - CA264_06225 0.12 -0.7 1,448,783 + CA264_06225 0.14 -0.6 1,448,846 + CA264_06225 0.19 +0.4 1,448,847 - CA264_06225 0.19 -1.3 1,448,850 + CA264_06225 0.19 +1.2 1,448,851 - CA264_06225 0.19 -1.1 1,448,852 + CA264_06225 0.19 +0.6 1,448,853 - CA264_06225 0.19 -0.1 1,448,903 + +0.4 1,448,904 - CA264_06225 0.23 -0.9 1,449,158 + CA264_06225 0.42 +0.4 1,449,199 + CA264_06225 0.45 +0.1 1,449,222 - CA264_06225 0.47 +0.2 1,449,225 + CA264_06225 0.47 -0.4 1,449,258 - CA264_06225 0.49 +0.6 1,449,258 - CA264_06225 0.49 -1.2 1,449,270 - CA264_06225 0.50 +1.3 1,449,270 - CA264_06225 0.50 -1.1 1,449,406 + CA264_06225 0.61 -0.5 1,449,406 + CA264_06225 0.61 +1.0 1,449,407 - CA264_06225 0.61 +0.4 1,449,474 + CA264_06225 0.66 +0.2 1,449,474 + CA264_06225 0.66 +0.0 1,449,475 - CA264_06225 0.66 +0.5 1,449,554 - CA264_06225 0.72 +0.0 1,449,748 + CA264_06225 0.86 +1.4 1,449,950 - -0.9 1,450,030 + -0.6 1,450,247 + CA264_06230 0.25 -0.3 1,450,297 + CA264_06230 0.29 -0.8 1,450,299 + CA264_06230 0.29 -0.2 1,450,299 + CA264_06230 0.29 +0.5 1,450,300 - CA264_06230 0.29 +0.7 1,450,431 + CA264_06230 0.42 -0.3 1,450,432 - CA264_06230 0.42 +0.1 1,450,451 - CA264_06230 0.43 +0.2 1,450,663 + CA264_06230 0.63 -0.7 1,450,684 - CA264_06230 0.65 +0.4 1,450,684 - CA264_06230 0.65 +0.1 1,450,684 - CA264_06230 0.65 +0.1 1,450,704 + CA264_06230 0.67 -0.6 1,450,705 - CA264_06230 0.67 +0.5 1,450,705 - CA264_06230 0.67 -0.4 1,450,705 - CA264_06230 0.67 +0.6 1,450,707 + CA264_06230 0.67 +1.0 1,450,708 - CA264_06230 0.67 -0.9 1,450,816 - CA264_06230 0.77 -0.9
Or see this region's nucleotide sequence