Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05320 and CA264_05325 are separated by 6 nucleotides CA264_05325 and CA264_05330 are separated by 48 nucleotides CA264_05330 and CA264_05335 are separated by 3 nucleotides
CA264_05320: CA264_05320 - para-aminobenzoate synthase, at 1,233,152 to 1,234,441
_05320
CA264_05325: CA264_05325 - hypothetical protein, at 1,234,448 to 1,235,920
_05325
CA264_05330: CA264_05330 - hypothetical protein, at 1,235,969 to 1,236,700
_05330
CA264_05335: CA264_05335 - Nif3-like dinuclear metal center hexameric protein, at 1,236,704 to 1,237,804
_05335
Position (kb)
1234
1235
1236 Strain fitness (log2 ratio)
-1
0
1 at 1233.476 kb on + strand, within CA264_05320 at 1233.525 kb on + strand, within CA264_05320 at 1233.602 kb on + strand, within CA264_05320 at 1233.602 kb on + strand, within CA264_05320 at 1233.779 kb on + strand, within CA264_05320 at 1233.831 kb on + strand, within CA264_05320 at 1233.854 kb on + strand, within CA264_05320 at 1233.854 kb on + strand, within CA264_05320 at 1233.887 kb on + strand, within CA264_05320 at 1233.887 kb on + strand, within CA264_05320 at 1233.895 kb on - strand, within CA264_05320 at 1233.933 kb on - strand, within CA264_05320 at 1233.945 kb on + strand, within CA264_05320 at 1234.130 kb on + strand, within CA264_05320 at 1234.339 kb on - strand at 1234.424 kb on + strand at 1234.425 kb on - strand at 1234.446 kb on + strand at 1234.449 kb on + strand at 1234.450 kb on - strand at 1234.450 kb on - strand at 1234.529 kb on - strand at 1234.569 kb on + strand at 1234.573 kb on + strand at 1234.574 kb on - strand at 1234.574 kb on - strand at 1234.574 kb on - strand at 1234.575 kb on + strand at 1234.575 kb on + strand at 1234.586 kb on + strand at 1234.637 kb on - strand, within CA264_05325 at 1234.637 kb on - strand, within CA264_05325 at 1234.647 kb on + strand, within CA264_05325 at 1234.648 kb on - strand, within CA264_05325 at 1234.707 kb on + strand, within CA264_05325 at 1234.708 kb on - strand, within CA264_05325 at 1234.708 kb on - strand, within CA264_05325 at 1234.708 kb on - strand, within CA264_05325 at 1234.708 kb on - strand, within CA264_05325 at 1234.711 kb on - strand, within CA264_05325 at 1234.711 kb on - strand, within CA264_05325 at 1234.711 kb on - strand, within CA264_05325 at 1234.711 kb on - strand, within CA264_05325 at 1234.745 kb on + strand, within CA264_05325 at 1234.746 kb on - strand, within CA264_05325 at 1234.910 kb on + strand, within CA264_05325 at 1234.933 kb on + strand, within CA264_05325 at 1234.966 kb on + strand, within CA264_05325 at 1235.043 kb on + strand, within CA264_05325 at 1235.044 kb on - strand, within CA264_05325 at 1235.088 kb on + strand, within CA264_05325 at 1235.103 kb on + strand, within CA264_05325 at 1235.104 kb on - strand, within CA264_05325 at 1235.130 kb on + strand, within CA264_05325 at 1235.180 kb on - strand, within CA264_05325 at 1235.198 kb on + strand, within CA264_05325 at 1235.198 kb on + strand, within CA264_05325 at 1235.198 kb on + strand, within CA264_05325 at 1235.199 kb on - strand, within CA264_05325 at 1235.199 kb on - strand, within CA264_05325 at 1235.423 kb on + strand, within CA264_05325 at 1235.424 kb on - strand, within CA264_05325 at 1235.424 kb on - strand, within CA264_05325 at 1235.715 kb on + strand, within CA264_05325 at 1235.716 kb on - strand, within CA264_05325 at 1235.777 kb on - strand at 1235.793 kb on - strand at 1235.839 kb on + strand at 1235.839 kb on + strand at 1235.840 kb on - strand at 1235.867 kb on + strand at 1235.915 kb on - strand at 1235.960 kb on - strand at 1236.747 kb on - strand at 1236.778 kb on + strand at 1236.787 kb on - strand at 1236.792 kb on - strand at 1236.802 kb on + strand at 1236.802 kb on + strand at 1236.803 kb on - strand at 1236.803 kb on - strand at 1236.805 kb on - strand at 1236.805 kb on - strand at 1236.806 kb on + strand at 1236.807 kb on - strand at 1236.879 kb on - strand, within CA264_05335 at 1236.879 kb on - strand, within CA264_05335 at 1236.879 kb on - strand, within CA264_05335 at 1236.879 kb on - strand, within CA264_05335 at 1236.881 kb on - strand, within CA264_05335
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 1,233,476 + CA264_05320 0.25 -1.3 1,233,525 + CA264_05320 0.29 -0.2 1,233,602 + CA264_05320 0.35 -0.0 1,233,602 + CA264_05320 0.35 -1.0 1,233,779 + CA264_05320 0.49 +0.4 1,233,831 + CA264_05320 0.53 +0.4 1,233,854 + CA264_05320 0.54 +0.6 1,233,854 + CA264_05320 0.54 -0.6 1,233,887 + CA264_05320 0.57 -1.0 1,233,887 + CA264_05320 0.57 +1.1 1,233,895 - CA264_05320 0.58 +0.1 1,233,933 - CA264_05320 0.61 -0.4 1,233,945 + CA264_05320 0.61 -0.1 1,234,130 + CA264_05320 0.76 +0.6 1,234,339 - +0.1 1,234,424 + +1.0 1,234,425 - -1.1 1,234,446 + +0.4 1,234,449 + +0.1 1,234,450 - +0.6 1,234,450 - +0.9 1,234,529 - -0.9 1,234,569 + -0.9 1,234,573 + -0.5 1,234,574 - +0.3 1,234,574 - +0.6 1,234,574 - +0.4 1,234,575 + -0.3 1,234,575 + +1.1 1,234,586 + -0.4 1,234,637 - CA264_05325 0.13 +0.2 1,234,637 - CA264_05325 0.13 -0.0 1,234,647 + CA264_05325 0.14 +0.6 1,234,648 - CA264_05325 0.14 -1.7 1,234,707 + CA264_05325 0.18 -0.4 1,234,708 - CA264_05325 0.18 +1.1 1,234,708 - CA264_05325 0.18 +0.7 1,234,708 - CA264_05325 0.18 -0.7 1,234,708 - CA264_05325 0.18 -0.7 1,234,711 - CA264_05325 0.18 +0.2 1,234,711 - CA264_05325 0.18 -0.4 1,234,711 - CA264_05325 0.18 +1.2 1,234,711 - CA264_05325 0.18 +1.0 1,234,745 + CA264_05325 0.20 +1.4 1,234,746 - CA264_05325 0.20 +0.7 1,234,910 + CA264_05325 0.31 +0.8 1,234,933 + CA264_05325 0.33 -0.1 1,234,966 + CA264_05325 0.35 -0.3 1,235,043 + CA264_05325 0.40 -0.0 1,235,044 - CA264_05325 0.40 -0.3 1,235,088 + CA264_05325 0.43 +0.0 1,235,103 + CA264_05325 0.44 +0.6 1,235,104 - CA264_05325 0.45 +0.5 1,235,130 + CA264_05325 0.46 +0.6 1,235,180 - CA264_05325 0.50 -0.3 1,235,198 + CA264_05325 0.51 +1.7 1,235,198 + CA264_05325 0.51 +1.2 1,235,198 + CA264_05325 0.51 -0.9 1,235,199 - CA264_05325 0.51 -0.6 1,235,199 - CA264_05325 0.51 +1.1 1,235,423 + CA264_05325 0.66 -0.0 1,235,424 - CA264_05325 0.66 -0.6 1,235,424 - CA264_05325 0.66 +0.0 1,235,715 + CA264_05325 0.86 +0.3 1,235,716 - CA264_05325 0.86 +0.6 1,235,777 - +0.5 1,235,793 - -0.4 1,235,839 + -1.3 1,235,839 + -0.6 1,235,840 - -0.3 1,235,867 + -0.5 1,235,915 - +0.5 1,235,960 - +1.2 1,236,747 - -0.8 1,236,778 + -0.4 1,236,787 - -0.5 1,236,792 - -0.6 1,236,802 + -0.9 1,236,802 + -0.7 1,236,803 - -0.8 1,236,803 - -0.4 1,236,805 - -1.6 1,236,805 - -0.2 1,236,806 + -0.6 1,236,807 - -0.0 1,236,879 - CA264_05335 0.16 -0.6 1,236,879 - CA264_05335 0.16 -0.3 1,236,879 - CA264_05335 0.16 +0.1 1,236,879 - CA264_05335 0.16 +0.4 1,236,881 - CA264_05335 0.16 +0.2
Or see this region's nucleotide sequence