Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05035 and CA264_05040 are separated by 76 nucleotides CA264_05040 and CA264_05045 are separated by 74 nucleotides CA264_05045 and CA264_05050 are separated by 30 nucleotides
CA264_05035: CA264_05035 - histidinol-phosphate transaminase, at 1,167,673 to 1,168,728
_05035
CA264_05040: CA264_05040 - bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase, at 1,168,805 to 1,169,908
_05040
CA264_05045: CA264_05045 - hypothetical protein, at 1,169,983 to 1,170,393
_05045
CA264_05050: CA264_05050 - hypothetical protein, at 1,170,424 to 1,170,630
_05050
Position (kb)
1168
1169
1170 Strain fitness (log2 ratio)
-2
-1
0
1 at 1167.815 kb on - strand, within CA264_05035 at 1167.816 kb on + strand, within CA264_05035 at 1167.848 kb on + strand, within CA264_05035 at 1167.869 kb on + strand, within CA264_05035 at 1167.923 kb on + strand, within CA264_05035 at 1167.923 kb on + strand, within CA264_05035 at 1167.923 kb on + strand, within CA264_05035 at 1167.923 kb on + strand, within CA264_05035 at 1167.924 kb on - strand, within CA264_05035 at 1167.924 kb on - strand, within CA264_05035 at 1167.997 kb on + strand, within CA264_05035 at 1167.998 kb on - strand, within CA264_05035 at 1167.998 kb on - strand, within CA264_05035 at 1167.998 kb on - strand, within CA264_05035 at 1168.099 kb on - strand, within CA264_05035 at 1168.152 kb on - strand, within CA264_05035 at 1168.152 kb on - strand, within CA264_05035 at 1168.165 kb on - strand, within CA264_05035 at 1168.167 kb on - strand, within CA264_05035 at 1168.179 kb on + strand, within CA264_05035 at 1168.179 kb on + strand, within CA264_05035 at 1168.180 kb on - strand, within CA264_05035 at 1168.180 kb on - strand, within CA264_05035 at 1168.200 kb on - strand, within CA264_05035 at 1168.217 kb on - strand, within CA264_05035 at 1168.362 kb on - strand, within CA264_05035 at 1168.365 kb on - strand, within CA264_05035 at 1168.384 kb on + strand, within CA264_05035 at 1168.528 kb on + strand, within CA264_05035 at 1168.617 kb on + strand, within CA264_05035 at 1168.657 kb on - strand at 1168.791 kb on - strand at 1168.962 kb on + strand, within CA264_05040 at 1169.005 kb on + strand, within CA264_05040 at 1169.059 kb on - strand, within CA264_05040 at 1169.296 kb on + strand, within CA264_05040 at 1169.296 kb on + strand, within CA264_05040 at 1169.297 kb on - strand, within CA264_05040 at 1169.300 kb on + strand, within CA264_05040 at 1169.508 kb on + strand, within CA264_05040 at 1169.509 kb on - strand, within CA264_05040 at 1169.562 kb on + strand, within CA264_05040 at 1169.673 kb on + strand, within CA264_05040 at 1169.900 kb on - strand at 1169.905 kb on - strand at 1169.961 kb on + strand at 1169.963 kb on + strand at 1169.964 kb on - strand at 1170.037 kb on + strand, within CA264_05045 at 1170.064 kb on - strand, within CA264_05045 at 1170.183 kb on + strand, within CA264_05045 at 1170.184 kb on - strand, within CA264_05045 at 1170.184 kb on - strand, within CA264_05045 at 1170.184 kb on - strand, within CA264_05045 at 1170.248 kb on - strand, within CA264_05045 at 1170.277 kb on + strand, within CA264_05045 at 1170.277 kb on + strand, within CA264_05045 at 1170.288 kb on - strand, within CA264_05045 at 1170.310 kb on - strand, within CA264_05045 at 1170.314 kb on + strand, within CA264_05045 at 1170.337 kb on - strand, within CA264_05045 at 1170.337 kb on - strand, within CA264_05045 at 1170.337 kb on - strand, within CA264_05045 at 1170.349 kb on + strand, within CA264_05045 at 1170.357 kb on + strand at 1170.357 kb on + strand at 1170.357 kb on + strand at 1170.358 kb on - strand at 1170.358 kb on - strand at 1170.367 kb on + strand at 1170.368 kb on - strand at 1170.400 kb on + strand at 1170.400 kb on + strand at 1170.401 kb on - strand at 1170.401 kb on - strand at 1170.401 kb on - strand at 1170.401 kb on - strand at 1170.484 kb on + strand, within CA264_05050 at 1170.569 kb on - strand, within CA264_05050 at 1170.596 kb on + strand, within CA264_05050 at 1170.597 kb on - strand, within CA264_05050 at 1170.599 kb on - strand, within CA264_05050 at 1170.700 kb on - strand at 1170.805 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 1,167,815 - CA264_05035 0.13 -0.5 1,167,816 + CA264_05035 0.14 -0.4 1,167,848 + CA264_05035 0.17 -0.4 1,167,869 + CA264_05035 0.19 +0.6 1,167,923 + CA264_05035 0.24 -0.7 1,167,923 + CA264_05035 0.24 -0.2 1,167,923 + CA264_05035 0.24 -0.0 1,167,923 + CA264_05035 0.24 +0.4 1,167,924 - CA264_05035 0.24 -1.9 1,167,924 - CA264_05035 0.24 +0.6 1,167,997 + CA264_05035 0.31 -0.8 1,167,998 - CA264_05035 0.31 -0.4 1,167,998 - CA264_05035 0.31 -0.2 1,167,998 - CA264_05035 0.31 -0.8 1,168,099 - CA264_05035 0.40 -2.3 1,168,152 - CA264_05035 0.45 +0.1 1,168,152 - CA264_05035 0.45 +0.1 1,168,165 - CA264_05035 0.47 +0.4 1,168,167 - CA264_05035 0.47 -0.9 1,168,179 + CA264_05035 0.48 +1.4 1,168,179 + CA264_05035 0.48 -1.6 1,168,180 - CA264_05035 0.48 +1.0 1,168,180 - CA264_05035 0.48 +0.8 1,168,200 - CA264_05035 0.50 -0.4 1,168,217 - CA264_05035 0.52 -0.4 1,168,362 - CA264_05035 0.65 -0.6 1,168,365 - CA264_05035 0.66 +0.2 1,168,384 + CA264_05035 0.67 -0.3 1,168,528 + CA264_05035 0.81 +0.6 1,168,617 + CA264_05035 0.89 +0.4 1,168,657 - -1.0 1,168,791 - +1.4 1,168,962 + CA264_05040 0.14 -1.3 1,169,005 + CA264_05040 0.18 -1.4 1,169,059 - CA264_05040 0.23 -1.6 1,169,296 + CA264_05040 0.44 -1.6 1,169,296 + CA264_05040 0.44 -1.3 1,169,297 - CA264_05040 0.45 -1.9 1,169,300 + CA264_05040 0.45 -1.5 1,169,508 + CA264_05040 0.64 -0.9 1,169,509 - CA264_05040 0.64 -0.3 1,169,562 + CA264_05040 0.69 +1.4 1,169,673 + CA264_05040 0.79 -1.8 1,169,900 - -0.6 1,169,905 - +0.1 1,169,961 + +0.1 1,169,963 + +0.8 1,169,964 - -0.0 1,170,037 + CA264_05045 0.13 +0.2 1,170,064 - CA264_05045 0.20 -0.1 1,170,183 + CA264_05045 0.49 +0.3 1,170,184 - CA264_05045 0.49 +0.1 1,170,184 - CA264_05045 0.49 +0.1 1,170,184 - CA264_05045 0.49 +0.3 1,170,248 - CA264_05045 0.64 -0.3 1,170,277 + CA264_05045 0.72 -0.6 1,170,277 + CA264_05045 0.72 -2.2 1,170,288 - CA264_05045 0.74 -0.2 1,170,310 - CA264_05045 0.80 -0.7 1,170,314 + CA264_05045 0.81 -0.6 1,170,337 - CA264_05045 0.86 +0.0 1,170,337 - CA264_05045 0.86 +0.7 1,170,337 - CA264_05045 0.86 +0.4 1,170,349 + CA264_05045 0.89 -0.8 1,170,357 + +0.3 1,170,357 + +0.0 1,170,357 + +0.0 1,170,358 - +0.7 1,170,358 - -0.8 1,170,367 + +0.5 1,170,368 - +0.5 1,170,400 + -0.1 1,170,400 + -0.8 1,170,401 - -0.2 1,170,401 - -1.0 1,170,401 - +0.3 1,170,401 - +0.2 1,170,484 + CA264_05050 0.29 -0.6 1,170,569 - CA264_05050 0.70 +0.2 1,170,596 + CA264_05050 0.83 -0.3 1,170,597 - CA264_05050 0.84 +0.1 1,170,599 - CA264_05050 0.85 -0.4 1,170,700 - -0.1 1,170,805 - -0.0
Or see this region's nucleotide sequence