Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05030 and CA264_05035 overlap by 8 nucleotides CA264_05035 and CA264_05040 are separated by 76 nucleotides
CA264_05030: CA264_05030 - histidinol dehydrogenase, at 1,166,391 to 1,167,680
_05030
CA264_05035: CA264_05035 - histidinol-phosphate transaminase, at 1,167,673 to 1,168,728
_05035
CA264_05040: CA264_05040 - bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase, at 1,168,805 to 1,169,908
_05040
Position (kb)
1167
1168
1169 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1166.698 kb on + strand, within CA264_05030 at 1166.760 kb on + strand, within CA264_05030 at 1166.853 kb on - strand, within CA264_05030 at 1166.879 kb on - strand, within CA264_05030 at 1166.888 kb on + strand, within CA264_05030 at 1166.888 kb on + strand, within CA264_05030 at 1166.889 kb on - strand, within CA264_05030 at 1166.891 kb on - strand, within CA264_05030 at 1166.891 kb on - strand, within CA264_05030 at 1166.895 kb on + strand, within CA264_05030 at 1166.895 kb on + strand, within CA264_05030 at 1166.896 kb on - strand, within CA264_05030 at 1166.896 kb on - strand, within CA264_05030 at 1167.002 kb on - strand, within CA264_05030 at 1167.021 kb on + strand, within CA264_05030 at 1167.025 kb on + strand, within CA264_05030 at 1167.025 kb on + strand, within CA264_05030 at 1167.133 kb on + strand, within CA264_05030 at 1167.133 kb on + strand, within CA264_05030 at 1167.145 kb on + strand, within CA264_05030 at 1167.190 kb on + strand, within CA264_05030 at 1167.287 kb on + strand, within CA264_05030 at 1167.299 kb on + strand, within CA264_05030 at 1167.300 kb on - strand, within CA264_05030 at 1167.338 kb on + strand, within CA264_05030 at 1167.405 kb on - strand, within CA264_05030 at 1167.531 kb on - strand, within CA264_05030 at 1167.558 kb on + strand at 1167.591 kb on - strand at 1167.646 kb on + strand at 1167.646 kb on + strand at 1167.647 kb on - strand at 1167.651 kb on - strand at 1167.652 kb on + strand at 1167.659 kb on + strand at 1167.800 kb on + strand, within CA264_05035 at 1167.815 kb on - strand, within CA264_05035 at 1167.816 kb on + strand, within CA264_05035 at 1167.848 kb on + strand, within CA264_05035 at 1167.869 kb on + strand, within CA264_05035 at 1167.923 kb on + strand, within CA264_05035 at 1167.923 kb on + strand, within CA264_05035 at 1167.923 kb on + strand, within CA264_05035 at 1167.923 kb on + strand, within CA264_05035 at 1167.924 kb on - strand, within CA264_05035 at 1167.924 kb on - strand, within CA264_05035 at 1167.997 kb on + strand, within CA264_05035 at 1167.998 kb on - strand, within CA264_05035 at 1167.998 kb on - strand, within CA264_05035 at 1167.998 kb on - strand, within CA264_05035 at 1168.099 kb on - strand, within CA264_05035 at 1168.152 kb on - strand, within CA264_05035 at 1168.152 kb on - strand, within CA264_05035 at 1168.165 kb on - strand, within CA264_05035 at 1168.167 kb on - strand, within CA264_05035 at 1168.179 kb on + strand, within CA264_05035 at 1168.179 kb on + strand, within CA264_05035 at 1168.180 kb on - strand, within CA264_05035 at 1168.180 kb on - strand, within CA264_05035 at 1168.200 kb on - strand, within CA264_05035 at 1168.217 kb on - strand, within CA264_05035 at 1168.362 kb on - strand, within CA264_05035 at 1168.365 kb on - strand, within CA264_05035 at 1168.384 kb on + strand, within CA264_05035 at 1168.528 kb on + strand, within CA264_05035 at 1168.617 kb on + strand, within CA264_05035 at 1168.657 kb on - strand at 1168.791 kb on - strand at 1168.962 kb on + strand, within CA264_05040 at 1169.005 kb on + strand, within CA264_05040 at 1169.059 kb on - strand, within CA264_05040 at 1169.296 kb on + strand, within CA264_05040 at 1169.296 kb on + strand, within CA264_05040 at 1169.297 kb on - strand, within CA264_05040 at 1169.300 kb on + strand, within CA264_05040 at 1169.508 kb on + strand, within CA264_05040 at 1169.509 kb on - strand, within CA264_05040 at 1169.562 kb on + strand, within CA264_05040 at 1169.673 kb on + strand, within CA264_05040
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 1,166,698 + CA264_05030 0.24 -1.0 1,166,760 + CA264_05030 0.29 -1.0 1,166,853 - CA264_05030 0.36 -0.1 1,166,879 - CA264_05030 0.38 -1.6 1,166,888 + CA264_05030 0.39 -1.5 1,166,888 + CA264_05030 0.39 -2.0 1,166,889 - CA264_05030 0.39 -0.8 1,166,891 - CA264_05030 0.39 -0.8 1,166,891 - CA264_05030 0.39 -1.2 1,166,895 + CA264_05030 0.39 -1.1 1,166,895 + CA264_05030 0.39 -0.8 1,166,896 - CA264_05030 0.39 -1.6 1,166,896 - CA264_05030 0.39 -1.3 1,167,002 - CA264_05030 0.47 -1.4 1,167,021 + CA264_05030 0.49 -1.5 1,167,025 + CA264_05030 0.49 -0.6 1,167,025 + CA264_05030 0.49 -1.9 1,167,133 + CA264_05030 0.58 -1.4 1,167,133 + CA264_05030 0.58 -1.1 1,167,145 + CA264_05030 0.58 +1.2 1,167,190 + CA264_05030 0.62 -3.1 1,167,287 + CA264_05030 0.69 -1.1 1,167,299 + CA264_05030 0.70 -2.2 1,167,300 - CA264_05030 0.70 -1.6 1,167,338 + CA264_05030 0.73 -1.8 1,167,405 - CA264_05030 0.79 -0.3 1,167,531 - CA264_05030 0.88 -1.1 1,167,558 + -0.8 1,167,591 - -0.6 1,167,646 + -2.5 1,167,646 + -0.7 1,167,647 - -1.5 1,167,651 - +0.4 1,167,652 + -1.5 1,167,659 + -0.2 1,167,800 + CA264_05035 0.12 +0.5 1,167,815 - CA264_05035 0.13 -0.5 1,167,816 + CA264_05035 0.14 -0.4 1,167,848 + CA264_05035 0.17 -0.4 1,167,869 + CA264_05035 0.19 +0.6 1,167,923 + CA264_05035 0.24 -0.7 1,167,923 + CA264_05035 0.24 -0.2 1,167,923 + CA264_05035 0.24 -0.0 1,167,923 + CA264_05035 0.24 +0.4 1,167,924 - CA264_05035 0.24 -1.9 1,167,924 - CA264_05035 0.24 +0.6 1,167,997 + CA264_05035 0.31 -0.8 1,167,998 - CA264_05035 0.31 -0.4 1,167,998 - CA264_05035 0.31 -0.2 1,167,998 - CA264_05035 0.31 -0.8 1,168,099 - CA264_05035 0.40 -2.3 1,168,152 - CA264_05035 0.45 +0.1 1,168,152 - CA264_05035 0.45 +0.1 1,168,165 - CA264_05035 0.47 +0.4 1,168,167 - CA264_05035 0.47 -0.9 1,168,179 + CA264_05035 0.48 +1.4 1,168,179 + CA264_05035 0.48 -1.6 1,168,180 - CA264_05035 0.48 +1.0 1,168,180 - CA264_05035 0.48 +0.8 1,168,200 - CA264_05035 0.50 -0.4 1,168,217 - CA264_05035 0.52 -0.4 1,168,362 - CA264_05035 0.65 -0.6 1,168,365 - CA264_05035 0.66 +0.2 1,168,384 + CA264_05035 0.67 -0.3 1,168,528 + CA264_05035 0.81 +0.6 1,168,617 + CA264_05035 0.89 +0.4 1,168,657 - -1.0 1,168,791 - +1.4 1,168,962 + CA264_05040 0.14 -1.3 1,169,005 + CA264_05040 0.18 -1.4 1,169,059 - CA264_05040 0.23 -1.6 1,169,296 + CA264_05040 0.44 -1.6 1,169,296 + CA264_05040 0.44 -1.3 1,169,297 - CA264_05040 0.45 -1.9 1,169,300 + CA264_05040 0.45 -1.5 1,169,508 + CA264_05040 0.64 -0.9 1,169,509 - CA264_05040 0.64 -0.3 1,169,562 + CA264_05040 0.69 +1.4 1,169,673 + CA264_05040 0.79 -1.8
Or see this region's nucleotide sequence