Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05020 and CA264_05025 are separated by 124 nucleotides CA264_05025 and CA264_05030 are separated by 6 nucleotides CA264_05030 and CA264_05035 overlap by 8 nucleotides
CA264_05020: CA264_05020 - hypothetical protein, at 1,164,959 to 1,165,408
_05020
CA264_05025: CA264_05025 - ATP phosphoribosyltransferase, at 1,165,533 to 1,166,384
_05025
CA264_05030: CA264_05030 - histidinol dehydrogenase, at 1,166,391 to 1,167,680
_05030
CA264_05035: CA264_05035 - histidinol-phosphate transaminase, at 1,167,673 to 1,168,728
_05035
Position (kb)
1166
1167
1168 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1165.399 kb on + strand at 1165.416 kb on - strand at 1165.424 kb on + strand at 1165.425 kb on - strand at 1165.431 kb on - strand at 1165.431 kb on - strand at 1165.435 kb on + strand at 1165.435 kb on + strand at 1165.435 kb on + strand at 1165.497 kb on - strand at 1165.499 kb on + strand at 1165.511 kb on + strand at 1165.516 kb on + strand at 1165.516 kb on + strand at 1165.525 kb on + strand at 1165.529 kb on + strand at 1165.529 kb on + strand at 1165.529 kb on + strand at 1165.529 kb on + strand at 1165.538 kb on - strand at 1165.543 kb on + strand at 1165.543 kb on + strand at 1165.544 kb on - strand at 1165.544 kb on - strand at 1165.604 kb on + strand at 1165.616 kb on - strand at 1165.616 kb on - strand at 1165.633 kb on + strand, within CA264_05025 at 1165.836 kb on + strand, within CA264_05025 at 1165.931 kb on + strand, within CA264_05025 at 1165.938 kb on - strand, within CA264_05025 at 1166.114 kb on - strand, within CA264_05025 at 1166.170 kb on - strand, within CA264_05025 at 1166.195 kb on + strand, within CA264_05025 at 1166.230 kb on + strand, within CA264_05025 at 1166.231 kb on - strand, within CA264_05025 at 1166.231 kb on - strand, within CA264_05025 at 1166.287 kb on + strand, within CA264_05025 at 1166.350 kb on + strand at 1166.382 kb on + strand at 1166.396 kb on + strand at 1166.404 kb on + strand at 1166.405 kb on - strand at 1166.492 kb on + strand at 1166.492 kb on + strand at 1166.493 kb on - strand at 1166.575 kb on + strand, within CA264_05030 at 1166.638 kb on + strand, within CA264_05030 at 1166.639 kb on - strand, within CA264_05030 at 1166.639 kb on - strand, within CA264_05030 at 1166.639 kb on - strand, within CA264_05030 at 1166.647 kb on - strand, within CA264_05030 at 1166.647 kb on - strand, within CA264_05030 at 1166.656 kb on + strand, within CA264_05030 at 1166.656 kb on + strand, within CA264_05030 at 1166.657 kb on - strand, within CA264_05030 at 1166.698 kb on + strand, within CA264_05030 at 1166.760 kb on + strand, within CA264_05030 at 1166.853 kb on - strand, within CA264_05030 at 1166.879 kb on - strand, within CA264_05030 at 1166.888 kb on + strand, within CA264_05030 at 1166.888 kb on + strand, within CA264_05030 at 1166.889 kb on - strand, within CA264_05030 at 1166.891 kb on - strand, within CA264_05030 at 1166.891 kb on - strand, within CA264_05030 at 1166.895 kb on + strand, within CA264_05030 at 1166.895 kb on + strand, within CA264_05030 at 1166.896 kb on - strand, within CA264_05030 at 1166.896 kb on - strand, within CA264_05030 at 1167.002 kb on - strand, within CA264_05030 at 1167.021 kb on + strand, within CA264_05030 at 1167.025 kb on + strand, within CA264_05030 at 1167.025 kb on + strand, within CA264_05030 at 1167.133 kb on + strand, within CA264_05030 at 1167.133 kb on + strand, within CA264_05030 at 1167.145 kb on + strand, within CA264_05030 at 1167.190 kb on + strand, within CA264_05030 at 1167.287 kb on + strand, within CA264_05030 at 1167.299 kb on + strand, within CA264_05030 at 1167.300 kb on - strand, within CA264_05030 at 1167.338 kb on + strand, within CA264_05030 at 1167.405 kb on - strand, within CA264_05030 at 1167.531 kb on - strand, within CA264_05030 at 1167.558 kb on + strand at 1167.591 kb on - strand at 1167.646 kb on + strand at 1167.646 kb on + strand at 1167.647 kb on - strand at 1167.651 kb on - strand at 1167.652 kb on + strand at 1167.659 kb on + strand at 1167.800 kb on + strand, within CA264_05035 at 1167.815 kb on - strand, within CA264_05035 at 1167.816 kb on + strand, within CA264_05035 at 1167.848 kb on + strand, within CA264_05035 at 1167.869 kb on + strand, within CA264_05035 at 1167.923 kb on + strand, within CA264_05035 at 1167.923 kb on + strand, within CA264_05035 at 1167.923 kb on + strand, within CA264_05035 at 1167.923 kb on + strand, within CA264_05035 at 1167.924 kb on - strand, within CA264_05035 at 1167.924 kb on - strand, within CA264_05035 at 1167.997 kb on + strand, within CA264_05035 at 1167.998 kb on - strand, within CA264_05035 at 1167.998 kb on - strand, within CA264_05035 at 1167.998 kb on - strand, within CA264_05035 at 1168.099 kb on - strand, within CA264_05035 at 1168.152 kb on - strand, within CA264_05035 at 1168.152 kb on - strand, within CA264_05035 at 1168.165 kb on - strand, within CA264_05035 at 1168.167 kb on - strand, within CA264_05035 at 1168.179 kb on + strand, within CA264_05035 at 1168.179 kb on + strand, within CA264_05035 at 1168.180 kb on - strand, within CA264_05035 at 1168.180 kb on - strand, within CA264_05035 at 1168.200 kb on - strand, within CA264_05035 at 1168.217 kb on - strand, within CA264_05035 at 1168.362 kb on - strand, within CA264_05035 at 1168.365 kb on - strand, within CA264_05035 at 1168.384 kb on + strand, within CA264_05035 at 1168.528 kb on + strand, within CA264_05035 at 1168.617 kb on + strand, within CA264_05035 at 1168.657 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 1,165,399 + +0.9 1,165,416 - -0.9 1,165,424 + -0.8 1,165,425 - -0.1 1,165,431 - -0.5 1,165,431 - +0.8 1,165,435 + -0.9 1,165,435 + -0.1 1,165,435 + -0.4 1,165,497 - -0.1 1,165,499 + -0.2 1,165,511 + -0.2 1,165,516 + +0.1 1,165,516 + -0.2 1,165,525 + -1.3 1,165,529 + +0.4 1,165,529 + +0.1 1,165,529 + -0.8 1,165,529 + -0.2 1,165,538 - -0.1 1,165,543 + -0.2 1,165,543 + +0.4 1,165,544 - -1.3 1,165,544 - +0.4 1,165,604 + -0.0 1,165,616 - -0.2 1,165,616 - -0.3 1,165,633 + CA264_05025 0.12 -1.5 1,165,836 + CA264_05025 0.36 -0.1 1,165,931 + CA264_05025 0.47 -2.8 1,165,938 - CA264_05025 0.48 +1.5 1,166,114 - CA264_05025 0.68 -0.4 1,166,170 - CA264_05025 0.75 -1.4 1,166,195 + CA264_05025 0.78 -0.2 1,166,230 + CA264_05025 0.82 -0.9 1,166,231 - CA264_05025 0.82 -0.1 1,166,231 - CA264_05025 0.82 -1.0 1,166,287 + CA264_05025 0.88 -0.4 1,166,350 + +0.8 1,166,382 + -0.6 1,166,396 + -0.6 1,166,404 + -0.8 1,166,405 - -0.6 1,166,492 + -2.0 1,166,492 + -0.8 1,166,493 - -1.5 1,166,575 + CA264_05030 0.14 -1.5 1,166,638 + CA264_05030 0.19 -0.4 1,166,639 - CA264_05030 0.19 -0.6 1,166,639 - CA264_05030 0.19 +0.7 1,166,639 - CA264_05030 0.19 -1.4 1,166,647 - CA264_05030 0.20 -1.5 1,166,647 - CA264_05030 0.20 -0.9 1,166,656 + CA264_05030 0.21 -1.1 1,166,656 + CA264_05030 0.21 -0.6 1,166,657 - CA264_05030 0.21 -2.0 1,166,698 + CA264_05030 0.24 -1.0 1,166,760 + CA264_05030 0.29 -1.0 1,166,853 - CA264_05030 0.36 -0.1 1,166,879 - CA264_05030 0.38 -1.6 1,166,888 + CA264_05030 0.39 -1.5 1,166,888 + CA264_05030 0.39 -2.0 1,166,889 - CA264_05030 0.39 -0.8 1,166,891 - CA264_05030 0.39 -0.8 1,166,891 - CA264_05030 0.39 -1.2 1,166,895 + CA264_05030 0.39 -1.1 1,166,895 + CA264_05030 0.39 -0.8 1,166,896 - CA264_05030 0.39 -1.6 1,166,896 - CA264_05030 0.39 -1.3 1,167,002 - CA264_05030 0.47 -1.4 1,167,021 + CA264_05030 0.49 -1.5 1,167,025 + CA264_05030 0.49 -0.6 1,167,025 + CA264_05030 0.49 -1.9 1,167,133 + CA264_05030 0.58 -1.4 1,167,133 + CA264_05030 0.58 -1.1 1,167,145 + CA264_05030 0.58 +1.2 1,167,190 + CA264_05030 0.62 -3.1 1,167,287 + CA264_05030 0.69 -1.1 1,167,299 + CA264_05030 0.70 -2.2 1,167,300 - CA264_05030 0.70 -1.6 1,167,338 + CA264_05030 0.73 -1.8 1,167,405 - CA264_05030 0.79 -0.3 1,167,531 - CA264_05030 0.88 -1.1 1,167,558 + -0.8 1,167,591 - -0.6 1,167,646 + -2.5 1,167,646 + -0.7 1,167,647 - -1.5 1,167,651 - +0.4 1,167,652 + -1.5 1,167,659 + -0.2 1,167,800 + CA264_05035 0.12 +0.5 1,167,815 - CA264_05035 0.13 -0.5 1,167,816 + CA264_05035 0.14 -0.4 1,167,848 + CA264_05035 0.17 -0.4 1,167,869 + CA264_05035 0.19 +0.6 1,167,923 + CA264_05035 0.24 -0.7 1,167,923 + CA264_05035 0.24 -0.2 1,167,923 + CA264_05035 0.24 -0.0 1,167,923 + CA264_05035 0.24 +0.4 1,167,924 - CA264_05035 0.24 -1.9 1,167,924 - CA264_05035 0.24 +0.6 1,167,997 + CA264_05035 0.31 -0.8 1,167,998 - CA264_05035 0.31 -0.4 1,167,998 - CA264_05035 0.31 -0.2 1,167,998 - CA264_05035 0.31 -0.8 1,168,099 - CA264_05035 0.40 -2.3 1,168,152 - CA264_05035 0.45 +0.1 1,168,152 - CA264_05035 0.45 +0.1 1,168,165 - CA264_05035 0.47 +0.4 1,168,167 - CA264_05035 0.47 -0.9 1,168,179 + CA264_05035 0.48 +1.4 1,168,179 + CA264_05035 0.48 -1.6 1,168,180 - CA264_05035 0.48 +1.0 1,168,180 - CA264_05035 0.48 +0.8 1,168,200 - CA264_05035 0.50 -0.4 1,168,217 - CA264_05035 0.52 -0.4 1,168,362 - CA264_05035 0.65 -0.6 1,168,365 - CA264_05035 0.66 +0.2 1,168,384 + CA264_05035 0.67 -0.3 1,168,528 + CA264_05035 0.81 +0.6 1,168,617 + CA264_05035 0.89 +0.4 1,168,657 - -1.0
Or see this region's nucleotide sequence