Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05010 and CA264_05015 overlap by 2 nucleotides CA264_05015 and CA264_05020 are separated by 3 nucleotides CA264_05020 and CA264_05025 are separated by 124 nucleotides CA264_05025 and CA264_05030 are separated by 6 nucleotides
CA264_05010: CA264_05010 - hypothetical protein, at 1,163,866 to 1,164,732
_05010
CA264_05015: CA264_05015 - hypothetical protein, at 1,164,731 to 1,164,955
_05015
CA264_05020: CA264_05020 - hypothetical protein, at 1,164,959 to 1,165,408
_05020
CA264_05025: CA264_05025 - ATP phosphoribosyltransferase, at 1,165,533 to 1,166,384
_05025
CA264_05030: CA264_05030 - histidinol dehydrogenase, at 1,166,391 to 1,167,680
_05030
Position (kb)
1165
1166
1167 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1164.587 kb on + strand, within CA264_05010 at 1164.597 kb on + strand, within CA264_05010 at 1164.764 kb on - strand at 1164.764 kb on - strand, within CA264_05015 at 1164.764 kb on - strand, within CA264_05015 at 1164.764 kb on - strand, within CA264_05015 at 1164.771 kb on + strand, within CA264_05015 at 1164.771 kb on + strand, within CA264_05015 at 1164.772 kb on - strand, within CA264_05015 at 1165.073 kb on + strand, within CA264_05020 at 1165.075 kb on + strand, within CA264_05020 at 1165.076 kb on - strand, within CA264_05020 at 1165.076 kb on - strand, within CA264_05020 at 1165.076 kb on - strand, within CA264_05020 at 1165.078 kb on + strand, within CA264_05020 at 1165.165 kb on + strand, within CA264_05020 at 1165.184 kb on - strand, within CA264_05020 at 1165.231 kb on + strand, within CA264_05020 at 1165.231 kb on + strand, within CA264_05020 at 1165.250 kb on + strand, within CA264_05020 at 1165.252 kb on + strand, within CA264_05020 at 1165.262 kb on + strand, within CA264_05020 at 1165.263 kb on - strand, within CA264_05020 at 1165.268 kb on + strand, within CA264_05020 at 1165.269 kb on - strand, within CA264_05020 at 1165.269 kb on - strand, within CA264_05020 at 1165.282 kb on + strand, within CA264_05020 at 1165.308 kb on + strand, within CA264_05020 at 1165.317 kb on - strand, within CA264_05020 at 1165.337 kb on + strand, within CA264_05020 at 1165.338 kb on - strand, within CA264_05020 at 1165.399 kb on + strand at 1165.416 kb on - strand at 1165.424 kb on + strand at 1165.425 kb on - strand at 1165.431 kb on - strand at 1165.431 kb on - strand at 1165.435 kb on + strand at 1165.435 kb on + strand at 1165.435 kb on + strand at 1165.497 kb on - strand at 1165.499 kb on + strand at 1165.511 kb on + strand at 1165.516 kb on + strand at 1165.516 kb on + strand at 1165.525 kb on + strand at 1165.529 kb on + strand at 1165.529 kb on + strand at 1165.529 kb on + strand at 1165.529 kb on + strand at 1165.538 kb on - strand at 1165.543 kb on + strand at 1165.543 kb on + strand at 1165.544 kb on - strand at 1165.544 kb on - strand at 1165.604 kb on + strand at 1165.616 kb on - strand at 1165.616 kb on - strand at 1165.633 kb on + strand, within CA264_05025 at 1165.836 kb on + strand, within CA264_05025 at 1165.931 kb on + strand, within CA264_05025 at 1165.938 kb on - strand, within CA264_05025 at 1166.114 kb on - strand, within CA264_05025 at 1166.170 kb on - strand, within CA264_05025 at 1166.195 kb on + strand, within CA264_05025 at 1166.230 kb on + strand, within CA264_05025 at 1166.231 kb on - strand, within CA264_05025 at 1166.231 kb on - strand, within CA264_05025 at 1166.287 kb on + strand, within CA264_05025 at 1166.350 kb on + strand at 1166.382 kb on + strand at 1166.396 kb on + strand at 1166.404 kb on + strand at 1166.405 kb on - strand at 1166.492 kb on + strand at 1166.492 kb on + strand at 1166.493 kb on - strand at 1166.575 kb on + strand, within CA264_05030 at 1166.638 kb on + strand, within CA264_05030 at 1166.639 kb on - strand, within CA264_05030 at 1166.639 kb on - strand, within CA264_05030 at 1166.639 kb on - strand, within CA264_05030 at 1166.647 kb on - strand, within CA264_05030 at 1166.647 kb on - strand, within CA264_05030 at 1166.656 kb on + strand, within CA264_05030 at 1166.656 kb on + strand, within CA264_05030 at 1166.657 kb on - strand, within CA264_05030 at 1166.698 kb on + strand, within CA264_05030 at 1166.760 kb on + strand, within CA264_05030 at 1166.853 kb on - strand, within CA264_05030 at 1166.879 kb on - strand, within CA264_05030 at 1166.888 kb on + strand, within CA264_05030 at 1166.888 kb on + strand, within CA264_05030 at 1166.889 kb on - strand, within CA264_05030 at 1166.891 kb on - strand, within CA264_05030 at 1166.891 kb on - strand, within CA264_05030 at 1166.895 kb on + strand, within CA264_05030 at 1166.895 kb on + strand, within CA264_05030 at 1166.896 kb on - strand, within CA264_05030 at 1166.896 kb on - strand, within CA264_05030 at 1167.002 kb on - strand, within CA264_05030 at 1167.021 kb on + strand, within CA264_05030 at 1167.025 kb on + strand, within CA264_05030 at 1167.025 kb on + strand, within CA264_05030 at 1167.133 kb on + strand, within CA264_05030 at 1167.133 kb on + strand, within CA264_05030 at 1167.145 kb on + strand, within CA264_05030 at 1167.190 kb on + strand, within CA264_05030 at 1167.287 kb on + strand, within CA264_05030 at 1167.299 kb on + strand, within CA264_05030 at 1167.300 kb on - strand, within CA264_05030 at 1167.338 kb on + strand, within CA264_05030
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 1,164,587 + CA264_05010 0.83 +0.0 1,164,597 + CA264_05010 0.84 -0.5 1,164,764 - +0.8 1,164,764 - CA264_05015 0.15 +0.2 1,164,764 - CA264_05015 0.15 -0.1 1,164,764 - CA264_05015 0.15 +0.5 1,164,771 + CA264_05015 0.18 -0.6 1,164,771 + CA264_05015 0.18 -0.7 1,164,772 - CA264_05015 0.18 -0.7 1,165,073 + CA264_05020 0.25 +0.8 1,165,075 + CA264_05020 0.26 -2.3 1,165,076 - CA264_05020 0.26 -0.1 1,165,076 - CA264_05020 0.26 -0.4 1,165,076 - CA264_05020 0.26 +0.8 1,165,078 + CA264_05020 0.26 +2.4 1,165,165 + CA264_05020 0.46 +0.3 1,165,184 - CA264_05020 0.50 -0.0 1,165,231 + CA264_05020 0.60 -0.2 1,165,231 + CA264_05020 0.60 -0.4 1,165,250 + CA264_05020 0.65 +0.3 1,165,252 + CA264_05020 0.65 -0.6 1,165,262 + CA264_05020 0.67 -1.6 1,165,263 - CA264_05020 0.68 -0.3 1,165,268 + CA264_05020 0.69 +0.1 1,165,269 - CA264_05020 0.69 -1.3 1,165,269 - CA264_05020 0.69 +0.6 1,165,282 + CA264_05020 0.72 +0.1 1,165,308 + CA264_05020 0.78 -0.6 1,165,317 - CA264_05020 0.80 -0.2 1,165,337 + CA264_05020 0.84 -0.2 1,165,338 - CA264_05020 0.84 -0.2 1,165,399 + +0.9 1,165,416 - -0.9 1,165,424 + -0.8 1,165,425 - -0.1 1,165,431 - -0.5 1,165,431 - +0.8 1,165,435 + -0.9 1,165,435 + -0.1 1,165,435 + -0.4 1,165,497 - -0.1 1,165,499 + -0.2 1,165,511 + -0.2 1,165,516 + +0.1 1,165,516 + -0.2 1,165,525 + -1.3 1,165,529 + +0.4 1,165,529 + +0.1 1,165,529 + -0.8 1,165,529 + -0.2 1,165,538 - -0.1 1,165,543 + -0.2 1,165,543 + +0.4 1,165,544 - -1.3 1,165,544 - +0.4 1,165,604 + -0.0 1,165,616 - -0.2 1,165,616 - -0.3 1,165,633 + CA264_05025 0.12 -1.5 1,165,836 + CA264_05025 0.36 -0.1 1,165,931 + CA264_05025 0.47 -2.8 1,165,938 - CA264_05025 0.48 +1.5 1,166,114 - CA264_05025 0.68 -0.4 1,166,170 - CA264_05025 0.75 -1.4 1,166,195 + CA264_05025 0.78 -0.2 1,166,230 + CA264_05025 0.82 -0.9 1,166,231 - CA264_05025 0.82 -0.1 1,166,231 - CA264_05025 0.82 -1.0 1,166,287 + CA264_05025 0.88 -0.4 1,166,350 + +0.8 1,166,382 + -0.6 1,166,396 + -0.6 1,166,404 + -0.8 1,166,405 - -0.6 1,166,492 + -2.0 1,166,492 + -0.8 1,166,493 - -1.5 1,166,575 + CA264_05030 0.14 -1.5 1,166,638 + CA264_05030 0.19 -0.4 1,166,639 - CA264_05030 0.19 -0.6 1,166,639 - CA264_05030 0.19 +0.7 1,166,639 - CA264_05030 0.19 -1.4 1,166,647 - CA264_05030 0.20 -1.5 1,166,647 - CA264_05030 0.20 -0.9 1,166,656 + CA264_05030 0.21 -1.1 1,166,656 + CA264_05030 0.21 -0.6 1,166,657 - CA264_05030 0.21 -2.0 1,166,698 + CA264_05030 0.24 -1.0 1,166,760 + CA264_05030 0.29 -1.0 1,166,853 - CA264_05030 0.36 -0.1 1,166,879 - CA264_05030 0.38 -1.6 1,166,888 + CA264_05030 0.39 -1.5 1,166,888 + CA264_05030 0.39 -2.0 1,166,889 - CA264_05030 0.39 -0.8 1,166,891 - CA264_05030 0.39 -0.8 1,166,891 - CA264_05030 0.39 -1.2 1,166,895 + CA264_05030 0.39 -1.1 1,166,895 + CA264_05030 0.39 -0.8 1,166,896 - CA264_05030 0.39 -1.6 1,166,896 - CA264_05030 0.39 -1.3 1,167,002 - CA264_05030 0.47 -1.4 1,167,021 + CA264_05030 0.49 -1.5 1,167,025 + CA264_05030 0.49 -0.6 1,167,025 + CA264_05030 0.49 -1.9 1,167,133 + CA264_05030 0.58 -1.4 1,167,133 + CA264_05030 0.58 -1.1 1,167,145 + CA264_05030 0.58 +1.2 1,167,190 + CA264_05030 0.62 -3.1 1,167,287 + CA264_05030 0.69 -1.1 1,167,299 + CA264_05030 0.70 -2.2 1,167,300 - CA264_05030 0.70 -1.6 1,167,338 + CA264_05030 0.73 -1.8
Or see this region's nucleotide sequence