Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04265 and CA264_04270 are separated by 53 nucleotides CA264_04270 and CA264_04275 are separated by 64 nucleotides CA264_04275 and CA264_04280 are separated by 609 nucleotides
CA264_04265: CA264_04265 - NADH-quinone oxidoreductase subunit B, at 986,482 to 987,120
_04265
CA264_04270: CA264_04270 - NADH:ubiquinone oxidoreductase subunit A, at 987,174 to 987,605
_04270
CA264_04275: CA264_04275 - histidine kinase, at 987,670 to 988,101
_04275
CA264_04280: CA264_04280 - hypothetical protein, at 988,711 to 989,112
_04280
Position (kb)
987
988
989 Strain fitness (log2 ratio)
-2
-1
0
1 at 986.684 kb on + strand, within CA264_04265 at 986.729 kb on + strand, within CA264_04265 at 986.729 kb on + strand, within CA264_04265 at 986.729 kb on + strand, within CA264_04265 at 986.729 kb on + strand, within CA264_04265 at 986.729 kb on + strand, within CA264_04265 at 986.729 kb on + strand, within CA264_04265 at 986.730 kb on - strand, within CA264_04265 at 986.730 kb on - strand, within CA264_04265 at 986.730 kb on - strand, within CA264_04265 at 986.730 kb on - strand, within CA264_04265 at 986.730 kb on - strand, within CA264_04265 at 986.734 kb on - strand, within CA264_04265 at 986.832 kb on + strand, within CA264_04265 at 986.887 kb on + strand, within CA264_04265 at 986.919 kb on - strand, within CA264_04265 at 987.059 kb on + strand at 987.135 kb on - strand at 987.146 kb on - strand at 987.164 kb on - strand at 987.164 kb on - strand at 987.164 kb on - strand at 987.166 kb on - strand at 987.166 kb on - strand at 987.168 kb on + strand at 987.168 kb on + strand at 987.169 kb on - strand at 987.206 kb on - strand at 987.265 kb on + strand, within CA264_04270 at 987.266 kb on - strand, within CA264_04270 at 987.266 kb on - strand, within CA264_04270 at 987.406 kb on + strand, within CA264_04270 at 987.508 kb on + strand, within CA264_04270 at 987.508 kb on + strand, within CA264_04270 at 987.509 kb on - strand, within CA264_04270 at 987.594 kb on + strand at 987.594 kb on + strand at 987.628 kb on - strand at 987.684 kb on + strand at 987.684 kb on + strand at 987.685 kb on - strand at 987.686 kb on + strand at 987.687 kb on - strand at 987.731 kb on + strand, within CA264_04275 at 987.731 kb on + strand, within CA264_04275 at 987.732 kb on - strand, within CA264_04275 at 987.748 kb on + strand, within CA264_04275 at 987.748 kb on + strand, within CA264_04275 at 987.749 kb on - strand, within CA264_04275 at 987.750 kb on + strand, within CA264_04275 at 987.757 kb on + strand, within CA264_04275 at 987.758 kb on - strand, within CA264_04275 at 987.826 kb on - strand, within CA264_04275 at 987.985 kb on + strand, within CA264_04275 at 988.028 kb on + strand, within CA264_04275 at 988.029 kb on - strand, within CA264_04275 at 988.210 kb on + strand at 988.250 kb on + strand at 988.307 kb on + strand at 988.342 kb on + strand at 988.343 kb on - strand at 988.343 kb on - strand at 988.344 kb on + strand at 988.345 kb on - strand at 988.348 kb on + strand at 988.348 kb on + strand at 988.349 kb on - strand at 988.391 kb on - strand at 988.448 kb on - strand at 988.451 kb on + strand at 988.468 kb on - strand at 988.468 kb on - strand at 988.529 kb on + strand at 988.530 kb on - strand at 988.532 kb on + strand at 988.564 kb on - strand at 988.615 kb on + strand at 988.620 kb on + strand at 988.620 kb on + strand at 988.620 kb on + strand at 988.627 kb on + strand at 988.629 kb on + strand at 988.629 kb on + strand at 988.630 kb on - strand at 988.630 kb on - strand at 988.630 kb on - strand at 988.630 kb on - strand at 988.656 kb on + strand at 988.657 kb on - strand at 988.663 kb on - strand at 988.672 kb on - strand at 988.674 kb on + strand at 988.674 kb on + strand at 988.674 kb on + strand at 988.674 kb on + strand at 988.681 kb on + strand at 988.681 kb on + strand at 988.682 kb on - strand at 988.683 kb on + strand at 988.683 kb on + strand at 988.684 kb on - strand at 988.684 kb on - strand at 988.684 kb on - strand at 988.686 kb on + strand at 988.687 kb on - strand at 988.693 kb on + strand at 988.706 kb on + strand at 988.707 kb on - strand at 988.707 kb on - strand at 988.711 kb on - strand at 988.842 kb on + strand, within CA264_04280 at 989.090 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 986,684 + CA264_04265 0.32 +0.1 986,729 + CA264_04265 0.39 -2.1 986,729 + CA264_04265 0.39 +1.7 986,729 + CA264_04265 0.39 +1.0 986,729 + CA264_04265 0.39 -1.0 986,729 + CA264_04265 0.39 +0.2 986,729 + CA264_04265 0.39 -0.4 986,730 - CA264_04265 0.39 -0.1 986,730 - CA264_04265 0.39 +0.1 986,730 - CA264_04265 0.39 -0.8 986,730 - CA264_04265 0.39 +0.2 986,730 - CA264_04265 0.39 -0.4 986,734 - CA264_04265 0.39 -0.5 986,832 + CA264_04265 0.55 +1.2 986,887 + CA264_04265 0.63 +0.1 986,919 - CA264_04265 0.68 -0.2 987,059 + -0.9 987,135 - -0.3 987,146 - -0.4 987,164 - +0.5 987,164 - -0.2 987,164 - -0.4 987,166 - -0.9 987,166 - -0.4 987,168 + -0.4 987,168 + +0.9 987,169 - -0.4 987,206 - -0.5 987,265 + CA264_04270 0.21 +0.1 987,266 - CA264_04270 0.21 -1.0 987,266 - CA264_04270 0.21 -0.8 987,406 + CA264_04270 0.54 -0.8 987,508 + CA264_04270 0.77 -0.0 987,508 + CA264_04270 0.77 -1.0 987,509 - CA264_04270 0.78 +0.3 987,594 + -0.5 987,594 + -0.2 987,628 - +0.9 987,684 + +0.2 987,684 + +0.5 987,685 - -0.9 987,686 + -0.1 987,687 - -1.5 987,731 + CA264_04275 0.14 -0.5 987,731 + CA264_04275 0.14 -0.2 987,732 - CA264_04275 0.14 -0.1 987,748 + CA264_04275 0.18 +0.2 987,748 + CA264_04275 0.18 +1.5 987,749 - CA264_04275 0.18 +0.4 987,750 + CA264_04275 0.19 -0.2 987,757 + CA264_04275 0.20 -0.2 987,758 - CA264_04275 0.20 -0.1 987,826 - CA264_04275 0.36 -0.0 987,985 + CA264_04275 0.73 -1.5 988,028 + CA264_04275 0.83 -1.2 988,029 - CA264_04275 0.83 +0.1 988,210 + -1.0 988,250 + -0.1 988,307 + -0.2 988,342 + -0.4 988,343 - +0.2 988,343 - -0.5 988,344 + +1.5 988,345 - +1.4 988,348 + -0.5 988,348 + -0.1 988,349 - -0.2 988,391 - +0.2 988,448 - -0.3 988,451 + -0.1 988,468 - -0.6 988,468 - -0.1 988,529 + +0.1 988,530 - -0.3 988,532 + +0.2 988,564 - +0.5 988,615 + -0.1 988,620 + +0.2 988,620 + +0.1 988,620 + -0.1 988,627 + -0.2 988,629 + -0.2 988,629 + -0.7 988,630 - +0.0 988,630 - -0.6 988,630 - -2.6 988,630 - -0.3 988,656 + -0.1 988,657 - -0.1 988,663 - +1.6 988,672 - -0.5 988,674 + +0.6 988,674 + +1.0 988,674 + +0.0 988,674 + -1.1 988,681 + -0.1 988,681 + -1.0 988,682 - -0.9 988,683 + -0.1 988,683 + -0.5 988,684 - +0.6 988,684 - -0.6 988,684 - +1.4 988,686 + -1.2 988,687 - +0.8 988,693 + +0.3 988,706 + -0.1 988,707 - -1.5 988,707 - -0.5 988,711 - -0.0 988,842 + CA264_04280 0.33 -1.6 989,090 - +0.5
Or see this region's nucleotide sequence