Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02020 and CA264_02025 are separated by 302 nucleotides CA264_02025 and CA264_02030 are separated by 22 nucleotides CA264_02030 and CA264_02035 are separated by 69 nucleotides
CA264_02020: CA264_02020 - histidinol-phosphate transaminase, at 464,817 to 466,964
_02020
CA264_02025: CA264_02025 - nitroreductase, at 467,267 to 467,851
_02025
CA264_02030: CA264_02030 - hypothetical protein, at 467,874 to 468,587
_02030
CA264_02035: CA264_02035 - hypothetical protein, at 468,657 to 469,526
_02035
Position (kb) 467
468
469 Strain fitness (log2 ratio) -1
0
1
2 at 466.915 kb on - strand at 466.987 kb on + strand at 466.994 kb on + strand at 467.024 kb on + strand at 467.025 kb on - strand at 467.025 kb on - strand at 467.027 kb on + strand at 467.027 kb on + strand at 467.028 kb on - strand at 467.028 kb on - strand at 467.033 kb on + strand at 467.034 kb on - strand at 467.034 kb on - strand at 467.034 kb on - strand at 467.038 kb on - strand at 467.038 kb on - strand at 467.043 kb on + strand at 467.043 kb on + strand at 467.044 kb on - strand at 467.047 kb on + strand at 467.047 kb on + strand at 467.207 kb on + strand at 467.242 kb on - strand at 467.288 kb on - strand at 467.432 kb on - strand, within CA264_02025 at 467.435 kb on + strand, within CA264_02025 at 467.436 kb on - strand, within CA264_02025 at 467.476 kb on + strand, within CA264_02025 at 467.476 kb on + strand, within CA264_02025 at 467.549 kb on + strand, within CA264_02025 at 467.550 kb on - strand, within CA264_02025 at 467.613 kb on + strand, within CA264_02025 at 467.647 kb on - strand, within CA264_02025 at 467.739 kb on - strand, within CA264_02025 at 467.849 kb on + strand at 467.849 kb on + strand at 467.852 kb on + strand at 467.853 kb on - strand at 467.853 kb on - strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.874 kb on - strand at 467.874 kb on - strand at 467.887 kb on + strand at 467.888 kb on - strand at 467.894 kb on + strand at 467.895 kb on - strand at 467.945 kb on + strand at 467.967 kb on + strand, within CA264_02030 at 467.967 kb on + strand, within CA264_02030 at 467.968 kb on - strand, within CA264_02030 at 467.968 kb on - strand, within CA264_02030 at 468.411 kb on + strand, within CA264_02030 at 468.491 kb on + strand, within CA264_02030 at 468.491 kb on + strand, within CA264_02030 at 468.503 kb on + strand, within CA264_02030 at 468.503 kb on + strand, within CA264_02030 at 468.596 kb on - strand at 468.596 kb on - strand at 468.602 kb on - strand at 468.622 kb on + strand at 468.622 kb on + strand at 468.623 kb on - strand at 468.788 kb on - strand, within CA264_02035 at 468.794 kb on + strand, within CA264_02035 at 468.809 kb on - strand, within CA264_02035 at 468.869 kb on - strand, within CA264_02035 at 468.931 kb on - strand, within CA264_02035 at 469.072 kb on + strand, within CA264_02035 at 469.135 kb on + strand, within CA264_02035 at 469.136 kb on - strand, within CA264_02035 at 469.158 kb on - strand, within CA264_02035 at 469.158 kb on - strand, within CA264_02035 at 469.186 kb on - strand, within CA264_02035 at 469.222 kb on + strand, within CA264_02035 at 469.223 kb on - strand, within CA264_02035 at 469.377 kb on + strand, within CA264_02035 at 469.377 kb on + strand, within CA264_02035 at 469.377 kb on + strand, within CA264_02035 at 469.377 kb on + strand, within CA264_02035 at 469.378 kb on - strand, within CA264_02035 at 469.378 kb on - strand, within CA264_02035 at 469.378 kb on - strand, within CA264_02035 at 469.378 kb on - strand, within CA264_02035 at 469.378 kb on - strand, within CA264_02035 at 469.430 kb on + strand, within CA264_02035 at 469.430 kb on + strand, within CA264_02035 at 469.431 kb on - strand, within CA264_02035 at 469.481 kb on + strand at 469.481 kb on + strand at 469.481 kb on + strand at 469.481 kb on + strand at 469.482 kb on - strand at 469.482 kb on - strand at 469.482 kb on - strand at 469.482 kb on - strand at 469.482 kb on - strand at 469.483 kb on + strand at 469.484 kb on - strand at 469.488 kb on + strand at 469.526 kb on + strand at 469.526 kb on + strand at 469.526 kb on + strand at 469.527 kb on - strand at 469.560 kb on + strand at 469.560 kb on + strand at 469.560 kb on + strand at 469.561 kb on - strand at 469.561 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 466,915 - +0.1 466,987 + +0.6 466,994 + +0.2 467,024 + +0.3 467,025 - +1.3 467,025 - -0.7 467,027 + +0.5 467,027 + +0.4 467,028 - +1.6 467,028 - +1.0 467,033 + +1.3 467,034 - -0.1 467,034 - +0.4 467,034 - +0.0 467,038 - +0.2 467,038 - +1.3 467,043 + +0.0 467,043 + +1.5 467,044 - +0.9 467,047 + +0.5 467,047 + -0.0 467,207 + +0.3 467,242 - +0.4 467,288 - +1.5 467,432 - CA264_02025 0.28 +2.4 467,435 + CA264_02025 0.29 +1.7 467,436 - CA264_02025 0.29 +1.5 467,476 + CA264_02025 0.36 +0.7 467,476 + CA264_02025 0.36 +0.7 467,549 + CA264_02025 0.48 +0.8 467,550 - CA264_02025 0.48 +1.3 467,613 + CA264_02025 0.59 +0.6 467,647 - CA264_02025 0.65 +1.3 467,739 - CA264_02025 0.81 +1.6 467,849 + +0.2 467,849 + +1.9 467,852 + -0.4 467,853 - +1.5 467,853 - +0.9 467,873 + +0.8 467,873 + +0.8 467,873 + +1.8 467,873 + +0.2 467,873 + -1.3 467,873 + +1.0 467,873 + -0.9 467,873 + -0.4 467,873 + +0.5 467,874 - +1.5 467,874 - +0.6 467,887 + +0.3 467,888 - +2.3 467,894 + +0.3 467,895 - +1.3 467,945 + -0.4 467,967 + CA264_02030 0.13 +0.6 467,967 + CA264_02030 0.13 +0.3 467,968 - CA264_02030 0.13 +1.1 467,968 - CA264_02030 0.13 +0.9 468,411 + CA264_02030 0.75 +0.1 468,491 + CA264_02030 0.86 -0.1 468,491 + CA264_02030 0.86 +1.2 468,503 + CA264_02030 0.88 +0.6 468,503 + CA264_02030 0.88 +0.4 468,596 - +0.8 468,596 - +1.5 468,602 - +0.0 468,622 + +0.1 468,622 + +0.4 468,623 - +0.5 468,788 - CA264_02035 0.15 +0.5 468,794 + CA264_02035 0.16 -0.8 468,809 - CA264_02035 0.17 +0.6 468,869 - CA264_02035 0.24 -0.4 468,931 - CA264_02035 0.31 +0.0 469,072 + CA264_02035 0.48 -1.3 469,135 + CA264_02035 0.55 -0.4 469,136 - CA264_02035 0.55 +0.5 469,158 - CA264_02035 0.58 -1.0 469,158 - CA264_02035 0.58 +0.6 469,186 - CA264_02035 0.61 +0.4 469,222 + CA264_02035 0.65 +0.2 469,223 - CA264_02035 0.65 -0.2 469,377 + CA264_02035 0.83 -0.3 469,377 + CA264_02035 0.83 -0.4 469,377 + CA264_02035 0.83 -0.2 469,377 + CA264_02035 0.83 +0.2 469,378 - CA264_02035 0.83 +0.1 469,378 - CA264_02035 0.83 +0.4 469,378 - CA264_02035 0.83 +0.4 469,378 - CA264_02035 0.83 +1.3 469,378 - CA264_02035 0.83 +1.0 469,430 + CA264_02035 0.89 -0.0 469,430 + CA264_02035 0.89 +0.3 469,431 - CA264_02035 0.89 +0.6 469,481 + +0.5 469,481 + -1.3 469,481 + +0.2 469,481 + -0.0 469,482 - +0.4 469,482 - -0.1 469,482 - -0.5 469,482 - +0.2 469,482 - -0.5 469,483 + +0.1 469,484 - -0.0 469,488 + +1.4 469,526 + -1.3 469,526 + -0.2 469,526 + +0.0 469,527 - +0.8 469,560 + +0.1 469,560 + -0.4 469,560 + +0.1 469,561 - -0.3 469,561 - +0.4
Or see this region's nucleotide sequence