Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01400 and CA264_01405 are separated by 401 nucleotides CA264_01405 and CA264_01410 are separated by 351 nucleotides
CA264_01400: CA264_01400 - lipid-A-disaccharide synthase, at 333,373 to 334,494
_01400
CA264_01405: CA264_01405 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 334,896 to 336,119
_01405
CA264_01410: CA264_01410 - ATP-dependent Clp protease proteolytic subunit, at 336,471 to 337,172
_01410
Position (kb) 334
335
336
337 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 334.490 kb on + strand at 334.490 kb on + strand at 334.492 kb on + strand at 334.492 kb on + strand at 334.492 kb on + strand at 334.578 kb on - strand at 334.604 kb on + strand at 334.708 kb on - strand at 334.708 kb on - strand at 334.708 kb on - strand at 334.710 kb on + strand at 334.776 kb on - strand at 334.776 kb on - strand at 334.795 kb on - strand at 334.799 kb on + strand at 334.849 kb on - strand at 334.855 kb on + strand at 334.856 kb on - strand at 334.918 kb on - strand at 334.949 kb on - strand at 334.962 kb on - strand at 335.031 kb on - strand, within CA264_01405 at 335.142 kb on - strand, within CA264_01405 at 335.144 kb on - strand, within CA264_01405 at 335.328 kb on - strand, within CA264_01405 at 335.479 kb on - strand, within CA264_01405 at 335.586 kb on + strand, within CA264_01405 at 335.600 kb on - strand, within CA264_01405 at 335.631 kb on - strand, within CA264_01405 at 335.633 kb on - strand, within CA264_01405 at 335.646 kb on + strand, within CA264_01405 at 335.657 kb on + strand, within CA264_01405 at 335.658 kb on - strand, within CA264_01405 at 335.661 kb on + strand, within CA264_01405 at 335.662 kb on - strand, within CA264_01405 at 335.683 kb on - strand, within CA264_01405 at 335.703 kb on + strand, within CA264_01405 at 335.704 kb on - strand, within CA264_01405 at 335.704 kb on - strand, within CA264_01405 at 335.765 kb on - strand, within CA264_01405 at 335.795 kb on + strand, within CA264_01405 at 335.856 kb on - strand, within CA264_01405 at 335.857 kb on + strand, within CA264_01405 at 335.857 kb on + strand, within CA264_01405 at 335.858 kb on - strand, within CA264_01405 at 335.865 kb on - strand, within CA264_01405 at 335.866 kb on + strand, within CA264_01405 at 335.867 kb on - strand, within CA264_01405 at 336.073 kb on - strand at 336.330 kb on + strand at 336.351 kb on + strand at 336.451 kb on - strand at 336.457 kb on + strand at 336.458 kb on - strand at 336.460 kb on + strand at 336.462 kb on + strand at 336.462 kb on + strand at 336.463 kb on - strand at 336.465 kb on + strand at 336.465 kb on + strand at 336.472 kb on + strand at 336.764 kb on + strand, within CA264_01410 at 336.764 kb on + strand, within CA264_01410 at 336.807 kb on + strand, within CA264_01410 at 337.096 kb on + strand, within CA264_01410 at 337.096 kb on + strand, within CA264_01410
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 334,490 + -0.7 334,490 + +0.2 334,492 + +0.1 334,492 + +0.5 334,492 + -0.2 334,578 - +0.2 334,604 + +0.3 334,708 - -0.6 334,708 - +1.1 334,708 - -1.0 334,710 + -0.6 334,776 - -1.0 334,776 - -0.7 334,795 - -0.6 334,799 + -0.5 334,849 - -0.9 334,855 + -0.1 334,856 - -0.6 334,918 - +0.9 334,949 - -0.8 334,962 - +0.1 335,031 - CA264_01405 0.11 +0.8 335,142 - CA264_01405 0.20 -2.8 335,144 - CA264_01405 0.20 -0.8 335,328 - CA264_01405 0.35 -0.3 335,479 - CA264_01405 0.48 +0.9 335,586 + CA264_01405 0.56 -0.5 335,600 - CA264_01405 0.58 -0.2 335,631 - CA264_01405 0.60 -1.6 335,633 - CA264_01405 0.60 -0.8 335,646 + CA264_01405 0.61 -0.1 335,657 + CA264_01405 0.62 +0.3 335,658 - CA264_01405 0.62 -0.3 335,661 + CA264_01405 0.62 -1.1 335,662 - CA264_01405 0.63 -0.8 335,683 - CA264_01405 0.64 -1.6 335,703 + CA264_01405 0.66 -0.6 335,704 - CA264_01405 0.66 +0.7 335,704 - CA264_01405 0.66 -0.0 335,765 - CA264_01405 0.71 -0.9 335,795 + CA264_01405 0.73 -0.7 335,856 - CA264_01405 0.78 -0.2 335,857 + CA264_01405 0.79 -1.7 335,857 + CA264_01405 0.79 -0.7 335,858 - CA264_01405 0.79 -1.0 335,865 - CA264_01405 0.79 +0.2 335,866 + CA264_01405 0.79 -1.2 335,867 - CA264_01405 0.79 -0.9 336,073 - -0.4 336,330 + -1.2 336,351 + -1.9 336,451 - +1.6 336,457 + -0.6 336,458 - +0.4 336,460 + -0.3 336,462 + -1.1 336,462 + +0.5 336,463 - -0.7 336,465 + -0.8 336,465 + +0.4 336,472 + -1.3 336,764 + CA264_01410 0.42 -0.9 336,764 + CA264_01410 0.42 -2.3 336,807 + CA264_01410 0.48 -2.2 337,096 + CA264_01410 0.89 -0.9 337,096 + CA264_01410 0.89 -0.3
Or see this region's nucleotide sequence