Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01045 and CA264_01050 are separated by 197 nucleotides CA264_01050 and CA264_01055 are separated by 145 nucleotides CA264_01055 and CA264_01060 are separated by 269 nucleotides
CA264_01045: CA264_01045 - hypothetical protein, at 230,755 to 231,579
_01045
CA264_01050: CA264_01050 - tRNA-Leu, at 231,777 to 231,858
_01050
CA264_01055: CA264_01055 - dicarboxylate/amino acid:cation symporter, at 232,004 to 233,440
_01055
CA264_01060: CA264_01060 - hypothetical protein, at 233,710 to 234,744
_01060
Position (kb) 232
233
234 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 231.018 kb on - strand, within CA264_01045 at 231.018 kb on - strand, within CA264_01045 at 231.042 kb on - strand, within CA264_01045 at 231.047 kb on + strand, within CA264_01045 at 231.048 kb on - strand, within CA264_01045 at 231.132 kb on - strand, within CA264_01045 at 231.132 kb on - strand, within CA264_01045 at 231.189 kb on + strand, within CA264_01045 at 231.190 kb on - strand, within CA264_01045 at 231.241 kb on + strand, within CA264_01045 at 231.242 kb on - strand, within CA264_01045 at 231.289 kb on + strand, within CA264_01045 at 231.290 kb on - strand, within CA264_01045 at 231.371 kb on + strand, within CA264_01045 at 231.371 kb on + strand, within CA264_01045 at 231.375 kb on + strand, within CA264_01045 at 231.376 kb on - strand, within CA264_01045 at 231.376 kb on - strand, within CA264_01045 at 231.378 kb on - strand, within CA264_01045 at 231.393 kb on + strand, within CA264_01045 at 231.400 kb on + strand, within CA264_01045 at 231.400 kb on + strand, within CA264_01045 at 231.423 kb on - strand, within CA264_01045 at 231.433 kb on + strand, within CA264_01045 at 231.434 kb on - strand, within CA264_01045 at 231.468 kb on + strand, within CA264_01045 at 231.469 kb on - strand, within CA264_01045 at 231.499 kb on + strand at 231.499 kb on + strand at 231.500 kb on - strand at 231.898 kb on - strand at 231.932 kb on - strand at 231.998 kb on + strand at 231.998 kb on + strand at 231.998 kb on + strand at 232.005 kb on + strand at 232.005 kb on + strand at 232.196 kb on + strand, within CA264_01055 at 232.196 kb on + strand, within CA264_01055 at 232.206 kb on - strand, within CA264_01055 at 232.251 kb on - strand, within CA264_01055 at 232.386 kb on + strand, within CA264_01055 at 232.387 kb on - strand, within CA264_01055 at 232.417 kb on - strand, within CA264_01055 at 232.430 kb on - strand, within CA264_01055 at 232.430 kb on - strand, within CA264_01055 at 232.599 kb on - strand, within CA264_01055 at 232.599 kb on - strand, within CA264_01055 at 232.630 kb on - strand, within CA264_01055 at 232.691 kb on - strand, within CA264_01055 at 232.691 kb on - strand, within CA264_01055 at 232.691 kb on - strand, within CA264_01055 at 232.982 kb on + strand, within CA264_01055 at 233.024 kb on + strand, within CA264_01055 at 233.058 kb on + strand, within CA264_01055 at 233.162 kb on - strand, within CA264_01055 at 233.162 kb on - strand, within CA264_01055 at 233.292 kb on + strand, within CA264_01055 at 233.356 kb on + strand at 233.365 kb on - strand at 233.381 kb on - strand at 233.441 kb on - strand at 233.560 kb on - strand at 233.560 kb on - strand at 233.572 kb on - strand at 233.573 kb on + strand at 233.574 kb on - strand at 233.614 kb on - strand at 233.652 kb on + strand at 233.652 kb on + strand at 233.653 kb on - strand at 233.696 kb on - strand at 233.752 kb on + strand at 233.772 kb on - strand at 233.865 kb on + strand, within CA264_01060 at 233.866 kb on - strand, within CA264_01060 at 233.870 kb on - strand, within CA264_01060 at 233.870 kb on - strand, within CA264_01060 at 233.938 kb on + strand, within CA264_01060 at 233.938 kb on + strand, within CA264_01060 at 234.052 kb on + strand, within CA264_01060 at 234.052 kb on + strand, within CA264_01060 at 234.062 kb on - strand, within CA264_01060 at 234.209 kb on - strand, within CA264_01060 at 234.219 kb on - strand, within CA264_01060 at 234.251 kb on + strand, within CA264_01060 at 234.274 kb on - strand, within CA264_01060 at 234.343 kb on - strand, within CA264_01060
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 231,018 - CA264_01045 0.32 +0.3 231,018 - CA264_01045 0.32 -0.4 231,042 - CA264_01045 0.35 +0.6 231,047 + CA264_01045 0.35 +1.4 231,048 - CA264_01045 0.36 -0.3 231,132 - CA264_01045 0.46 +0.1 231,132 - CA264_01045 0.46 -0.9 231,189 + CA264_01045 0.53 +0.9 231,190 - CA264_01045 0.53 -0.8 231,241 + CA264_01045 0.59 -0.9 231,242 - CA264_01045 0.59 +0.1 231,289 + CA264_01045 0.65 -0.8 231,290 - CA264_01045 0.65 +0.2 231,371 + CA264_01045 0.75 -0.7 231,371 + CA264_01045 0.75 +0.2 231,375 + CA264_01045 0.75 -0.3 231,376 - CA264_01045 0.75 -0.3 231,376 - CA264_01045 0.75 -1.7 231,378 - CA264_01045 0.76 -0.4 231,393 + CA264_01045 0.77 -0.1 231,400 + CA264_01045 0.78 -0.4 231,400 + CA264_01045 0.78 -0.6 231,423 - CA264_01045 0.81 -0.0 231,433 + CA264_01045 0.82 +1.2 231,434 - CA264_01045 0.82 +0.4 231,468 + CA264_01045 0.86 +0.0 231,469 - CA264_01045 0.87 -0.0 231,499 + +0.2 231,499 + +0.6 231,500 - +0.0 231,898 - -0.3 231,932 - +1.0 231,998 + -0.9 231,998 + -0.8 231,998 + -0.2 232,005 + +0.3 232,005 + -0.1 232,196 + CA264_01055 0.13 -0.4 232,196 + CA264_01055 0.13 -1.1 232,206 - CA264_01055 0.14 -0.3 232,251 - CA264_01055 0.17 -1.1 232,386 + CA264_01055 0.27 -0.1 232,387 - CA264_01055 0.27 -0.6 232,417 - CA264_01055 0.29 -0.6 232,430 - CA264_01055 0.30 -0.8 232,430 - CA264_01055 0.30 -0.2 232,599 - CA264_01055 0.41 -1.4 232,599 - CA264_01055 0.41 -0.5 232,630 - CA264_01055 0.44 +0.2 232,691 - CA264_01055 0.48 +1.0 232,691 - CA264_01055 0.48 +0.2 232,691 - CA264_01055 0.48 -0.3 232,982 + CA264_01055 0.68 -1.5 233,024 + CA264_01055 0.71 -0.8 233,058 + CA264_01055 0.73 -0.4 233,162 - CA264_01055 0.81 -0.8 233,162 - CA264_01055 0.81 -0.2 233,292 + CA264_01055 0.90 -1.1 233,356 + -0.9 233,365 - -0.2 233,381 - -0.8 233,441 - -0.8 233,560 - -0.3 233,560 - +0.4 233,572 - +0.5 233,573 + -0.9 233,574 - -0.5 233,614 - -1.3 233,652 + -3.2 233,652 + +1.0 233,653 - +0.0 233,696 - -0.2 233,752 + -1.1 233,772 - -0.4 233,865 + CA264_01060 0.15 -0.0 233,866 - CA264_01060 0.15 +0.8 233,870 - CA264_01060 0.15 +2.1 233,870 - CA264_01060 0.15 +1.0 233,938 + CA264_01060 0.22 +0.4 233,938 + CA264_01060 0.22 -0.6 234,052 + CA264_01060 0.33 -1.2 234,052 + CA264_01060 0.33 -0.5 234,062 - CA264_01060 0.34 -0.0 234,209 - CA264_01060 0.48 -0.6 234,219 - CA264_01060 0.49 +0.4 234,251 + CA264_01060 0.52 -1.3 234,274 - CA264_01060 0.54 +0.4 234,343 - CA264_01060 0.61 -0.1
Or see this region's nucleotide sequence