Experiment: Glycolic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03650 and ABID97_RS03655 are separated by 8 nucleotides ABID97_RS03655 and ABID97_RS03660 are separated by 29 nucleotides
ABID97_RS03650: ABID97_RS03650 - FAD-linked oxidase C-terminal domain-containing protein, at 751,137 to 752,639
_RS03650
ABID97_RS03655: ABID97_RS03655 - glycolate oxidase subunit GlcE, at 752,648 to 753,775
_RS03655
ABID97_RS03660: ABID97_RS03660 - glycolate oxidase subunit GlcF, at 753,805 to 755,037
_RS03660
Position (kb) 752
753
754 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 751.653 kb on + strand, within ABID97_RS03650 at 751.653 kb on + strand, within ABID97_RS03650 at 751.654 kb on - strand, within ABID97_RS03650 at 751.986 kb on + strand, within ABID97_RS03650 at 752.190 kb on + strand, within ABID97_RS03650 at 752.190 kb on + strand, within ABID97_RS03650 at 752.190 kb on + strand, within ABID97_RS03650 at 752.190 kb on + strand, within ABID97_RS03650 at 752.191 kb on - strand, within ABID97_RS03650 at 752.191 kb on - strand, within ABID97_RS03650 at 752.191 kb on - strand, within ABID97_RS03650 at 752.191 kb on - strand, within ABID97_RS03650 at 752.191 kb on - strand, within ABID97_RS03650 at 752.191 kb on - strand, within ABID97_RS03650 at 752.268 kb on + strand, within ABID97_RS03650 at 752.268 kb on + strand, within ABID97_RS03650 at 752.269 kb on - strand, within ABID97_RS03650 at 752.269 kb on - strand, within ABID97_RS03650 at 752.269 kb on - strand, within ABID97_RS03650 at 752.804 kb on + strand, within ABID97_RS03655 at 752.805 kb on - strand, within ABID97_RS03655 at 753.002 kb on + strand, within ABID97_RS03655 at 753.916 kb on + strand at 753.917 kb on - strand at 753.917 kb on - strand at 753.961 kb on + strand, within ABID97_RS03660 at 753.961 kb on + strand, within ABID97_RS03660 at 753.961 kb on + strand, within ABID97_RS03660 at 753.961 kb on + strand, within ABID97_RS03660 at 753.961 kb on + strand, within ABID97_RS03660 at 753.962 kb on - strand, within ABID97_RS03660 at 753.962 kb on - strand, within ABID97_RS03660 at 753.962 kb on - strand, within ABID97_RS03660 at 754.075 kb on + strand, within ABID97_RS03660 at 754.604 kb on - strand, within ABID97_RS03660 at 754.604 kb on - strand, within ABID97_RS03660
Per-strain Table
Position Strand Gene LocusTag Fraction Glycolic Acid (C) remove 751,653 + ABID97_RS03650 0.34 -4.3 751,653 + ABID97_RS03650 0.34 -5.1 751,654 - ABID97_RS03650 0.34 -4.0 751,986 + ABID97_RS03650 0.56 -4.3 752,190 + ABID97_RS03650 0.70 -4.2 752,190 + ABID97_RS03650 0.70 -3.6 752,190 + ABID97_RS03650 0.70 -4.0 752,190 + ABID97_RS03650 0.70 -2.4 752,191 - ABID97_RS03650 0.70 -5.3 752,191 - ABID97_RS03650 0.70 -3.4 752,191 - ABID97_RS03650 0.70 -3.1 752,191 - ABID97_RS03650 0.70 -5.8 752,191 - ABID97_RS03650 0.70 -5.1 752,191 - ABID97_RS03650 0.70 +0.0 752,268 + ABID97_RS03650 0.75 -3.0 752,268 + ABID97_RS03650 0.75 -5.7 752,269 - ABID97_RS03650 0.75 -3.8 752,269 - ABID97_RS03650 0.75 -5.3 752,269 - ABID97_RS03650 0.75 -4.8 752,804 + ABID97_RS03655 0.14 -3.7 752,805 - ABID97_RS03655 0.14 -0.8 753,002 + ABID97_RS03655 0.31 -4.0 753,916 + -4.8 753,917 - -4.1 753,917 - -0.8 753,961 + ABID97_RS03660 0.13 -3.8 753,961 + ABID97_RS03660 0.13 +1.0 753,961 + ABID97_RS03660 0.13 -6.1 753,961 + ABID97_RS03660 0.13 -2.9 753,961 + ABID97_RS03660 0.13 -5.4 753,962 - ABID97_RS03660 0.13 -4.6 753,962 - ABID97_RS03660 0.13 -1.0 753,962 - ABID97_RS03660 0.13 -4.2 754,075 + ABID97_RS03660 0.22 -3.6 754,604 - ABID97_RS03660 0.65 +0.0 754,604 - ABID97_RS03660 0.65 -3.2
Or see this region's nucleotide sequence