Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4786

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
5,336,427	+		PfGW456L13_4785	0.44	-0.5
5,336,427	+		PfGW456L13_4785	0.44	+0.2
5,336,428	-		PfGW456L13_4785	0.44	+0.1
5,337,178	+				+0.4
5,337,178	+				+0.9
5,337,178	+				-0.2
5,337,178	+				-1.6
5,337,178	+				-0.4
5,337,178	+				-0.7
5,337,178	+				-0.5
5,337,178	+				-1.3
5,337,178	+				+0.1
5,337,179	-				+0.7
5,337,179	-				+0.4
5,337,179	-				-0.7
5,337,179	-				+0.1
5,337,179	-				+0.3
5,337,269	+				+0.8
5,337,269	+				+0.5
5,337,269	+				-1.1
5,337,302	-				+0.5
5,337,302	-				-0.8
5,337,322	-				+0.8
5,337,407	-				-0.6
5,337,429	+				-3.1
5,337,429	+				-0.8
5,337,430	-				+0.1
5,337,430	-				+1.0
5,337,430	-				-0.1
5,337,558	+		PfGW456L13_4786	0.13	+0.6
5,337,558	+		PfGW456L13_4786	0.13	+0.6
5,337,558	+		PfGW456L13_4786	0.13	-0.4
5,337,559	-		PfGW456L13_4786	0.13	+0.4
5,337,559	-		PfGW456L13_4786	0.13	+1.7
5,337,559	-		PfGW456L13_4786	0.13	+0.3
5,337,559	-		PfGW456L13_4786	0.13	+0.0
5,337,579	+		PfGW456L13_4786	0.14	+1.3
5,337,579	+		PfGW456L13_4786	0.14	-0.2
5,337,580	-		PfGW456L13_4786	0.14	+0.1
5,337,580	-		PfGW456L13_4786	0.14	+0.0
5,337,580	-		PfGW456L13_4786	0.14	-0.3
5,337,654	+		PfGW456L13_4786	0.19	-0.5
5,337,655	-		PfGW456L13_4786	0.19	+0.6
5,337,655	-		PfGW456L13_4786	0.19	-1.7
5,337,655	-		PfGW456L13_4786	0.19	+0.0
5,337,655	-		PfGW456L13_4786	0.19	+1.0
5,337,655	-		PfGW456L13_4786	0.19	+0.1
5,337,700	-		PfGW456L13_4786	0.22	+0.2
5,337,760	-		PfGW456L13_4786	0.26	+0.7
5,337,760	-		PfGW456L13_4786	0.26	-2.4
5,337,852	+		PfGW456L13_4786	0.32	+0.1
5,337,852	+		PfGW456L13_4786	0.32	-0.5
5,337,853	-		PfGW456L13_4786	0.33	+1.3
5,337,853	-		PfGW456L13_4786	0.33	-0.6
5,337,853	-		PfGW456L13_4786	0.33	-0.6
5,337,853	-		PfGW456L13_4786	0.33	+0.6
5,338,224	+		PfGW456L13_4786	0.57	+0.3
5,338,224	+		PfGW456L13_4786	0.57	-1.0
5,338,225	-		PfGW456L13_4786	0.57	-0.7
5,338,225	-		PfGW456L13_4786	0.57	-0.1
5,338,225	-		PfGW456L13_4786	0.57	-0.8
5,338,225	-		PfGW456L13_4786	0.57	+0.0
5,338,284	-		PfGW456L13_4786	0.61	+1.4
5,338,297	+		PfGW456L13_4786	0.62	-1.1
5,338,297	+		PfGW456L13_4786	0.62	+0.1
5,338,362	+		PfGW456L13_4786	0.66	+0.3
5,338,363	-		PfGW456L13_4786	0.66	+0.2
5,338,363	-		PfGW456L13_4786	0.66	-0.3
5,338,363	-		PfGW456L13_4786	0.66	+0.8
5,338,376	+		PfGW456L13_4786	0.67	+1.7
5,338,443	+		PfGW456L13_4786	0.72	-0.9
5,338,444	-		PfGW456L13_4786	0.72	+0.9
5,338,444	-		PfGW456L13_4786	0.72	+0.7
5,338,444	-		PfGW456L13_4786	0.72	+0.8
5,338,485	+		PfGW456L13_4786	0.74	+0.1
5,338,486	-		PfGW456L13_4786	0.74	-0.3
5,338,491	+		PfGW456L13_4786	0.75	+0.0
5,338,491	+		PfGW456L13_4786	0.75	-2.4
5,338,491	+		PfGW456L13_4786	0.75	+1.6
5,338,521	+		PfGW456L13_4786	0.77	+1.3
5,338,522	-		PfGW456L13_4786	0.77	+0.7
5,338,572	+		PfGW456L13_4786	0.80	+0.5
5,338,573	-		PfGW456L13_4786	0.80	+1.0
5,338,677	+		PfGW456L13_4786	0.87	+0.0
5,338,755	+				+1.1
5,338,755	+				-1.5
5,338,755	+				+0.6
5,338,756	-				+0.0
5,338,756	-				-0.5
5,338,756	-				-0.2
5,338,788	+				-0.1
5,338,788	+				-0.2
5,338,788	+				+0.0
5,338,788	+				-0.1
5,338,788	+				-0.2
5,338,788	+				-0.6
5,338,788	+				-0.1
5,338,788	+				+0.6
5,338,788	+				-0.6
5,338,789	-				+0.0
5,338,789	-				+0.8
5,338,789	-				-1.1
5,338,789	-				-0.4
5,338,789	-				+0.3
5,338,789	-				+1.2
5,338,789	-				-1.1
5,338,789	-				+0.2
5,338,789	-				-0.2
5,338,789	-				-0.8
5,338,789	-				+0.7
5,338,789	-				-0.1
5,338,789	-				-1.6
5,338,789	-				-0.2
5,338,789	-				-0.8
5,338,919	-				-1.5
5,338,919	-				-0.0
5,338,919	-				+0.9
5,338,944	-				+0.1
5,338,944	-				+0.8
5,338,945	+				+0.1
5,338,945	+				-1.9
5,338,945	+				-0.4
5,338,945	+				-1.5
5,338,945	+				-1.2
5,338,945	+				-0.4
5,338,945	+				+0.4
5,338,945	+				+0.2
5,338,945	+				+0.7
5,338,946	-				+0.1
5,338,946	-				+1.3
5,338,946	-				+1.5
5,338,946	-				-0.3
5,338,946	-				-0.6
5,338,946	-				-1.3
5,338,946	-				+0.2
5,338,946	-				+0.4
5,338,946	-				-0.2
5,338,946	-				-1.8
5,338,959	-				+1.0
5,338,960	+				+1.2
5,338,960	+				-1.2
5,338,960	+				+0.6
5,338,961	-				-1.8
5,338,961	-				-0.7
5,338,961	-				+0.5
5,338,961	-				-1.1
5,338,961	-				+0.8
5,338,961	-				-0.2
5,339,077	+		PfGW456L13_4787	0.22	-1.6
5,339,077	+		PfGW456L13_4787	0.22	-1.9
5,339,077	+		PfGW456L13_4787	0.22	-0.3
5,339,077	+		PfGW456L13_4787	0.22	-2.0
5,339,077	+		PfGW456L13_4787	0.22	-0.3
5,339,077	+		PfGW456L13_4787	0.22	-0.1
5,339,077	+		PfGW456L13_4787	0.22	-1.1
5,339,077	+		PfGW456L13_4787	0.22	-1.0
5,339,078	-		PfGW456L13_4787	0.22	-0.8
5,339,078	-		PfGW456L13_4787	0.22	+0.0
5,339,078	-		PfGW456L13_4787	0.22	-0.8
5,339,078	-		PfGW456L13_4787	0.22	-2.1
5,339,078	-		PfGW456L13_4787	0.22	+0.5
5,339,078	-		PfGW456L13_4787	0.22	-0.0
5,339,078	-		PfGW456L13_4787	0.22	+0.9
5,339,078	-		PfGW456L13_4787	0.22	-0.5
5,339,078	-		PfGW456L13_4787	0.22	-1.8
5,339,086	+		PfGW456L13_4787	0.23	+0.4
5,339,122	+		PfGW456L13_4787	0.27	+0.1
5,339,122	+		PfGW456L13_4787	0.27	+0.1
5,339,122	+		PfGW456L13_4787	0.27	-0.1
5,339,122	+		PfGW456L13_4787	0.27	-0.6
5,339,123	-		PfGW456L13_4787	0.27	-0.2
5,339,123	-		PfGW456L13_4787	0.27	+1.1
5,339,123	-		PfGW456L13_4787	0.27	-0.7
5,339,247	+		PfGW456L13_4787	0.40	+0.7
5,339,248	-		PfGW456L13_4787	0.40	+1.0
5,339,289	+		PfGW456L13_4787	0.44	+0.4
5,339,289	+		PfGW456L13_4787	0.44	+0.0
5,339,289	+		PfGW456L13_4787	0.44	+0.5
5,339,289	+		PfGW456L13_4787	0.44	-0.6
5,339,289	+		PfGW456L13_4787	0.44	-0.7
5,339,290	-		PfGW456L13_4787	0.44	+0.0
5,339,290	-		PfGW456L13_4787	0.44	-0.7
5,339,290	-		PfGW456L13_4787	0.44	+0.6
5,339,290	-		PfGW456L13_4787	0.44	+0.3
5,339,290	-		PfGW456L13_4787	0.44	-1.1
5,339,290	-		PfGW456L13_4787	0.44	-1.1
5,339,378	-		PfGW456L13_4787	0.54	+1.2
5,339,378	-		PfGW456L13_4787	0.54	+1.5
5,339,401	+		PfGW456L13_4787	0.56	-0.3
5,339,431	+		PfGW456L13_4787	0.59	+0.4
5,339,431	+		PfGW456L13_4787	0.59	+0.5
5,339,467	-		PfGW456L13_4787	0.63	+0.9
5,339,660	+		PfGW456L13_4787	0.84	+0.1
5,339,661	-		PfGW456L13_4787	0.84	+1.4
5,339,661	-		PfGW456L13_4787	0.84	+1.1
5,339,703	+		PfGW456L13_4787	0.88	-2.1
5,339,703	+		PfGW456L13_4787	0.88	-0.4
5,339,703	+		PfGW456L13_4787	0.88	-0.6
5,339,704	-		PfGW456L13_4787	0.88	-0.8
5,339,704	-		PfGW456L13_4787	0.88	+0.8
5,339,704	-		PfGW456L13_4787	0.88	-0.4
5,339,704	-		PfGW456L13_4787	0.88	-0.5
5,339,728	-				+0.3
5,339,755	+				+1.4
5,339,756	-				-0.4
5,339,838	+				+1.8
5,339,838	+				+0.5
5,339,838	+				+0.9
5,339,838	+				+1.0
5,339,838	+				+0.6
5,339,839	-				-3.0
5,339,839	-				-0.6
5,339,839	-				+0.3
5,339,839	-				-0.3
5,339,847	+				+1.1
5,339,848	-		PfGW456L13_4788	0.10	+1.1
5,339,848	-		PfGW456L13_4788	0.10	+0.1
5,339,848	-		PfGW456L13_4788	0.10	-0.6
5,339,850	-		PfGW456L13_4788	0.11	+1.5