Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4327

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
4,837,197	+		PfGW456L13_4325	0.85	-1.1
4,837,197	+		PfGW456L13_4325	0.85	+0.2
4,837,197	+		PfGW456L13_4325	0.85	-0.4
4,837,197	+		PfGW456L13_4325	0.85	-1.0
4,837,197	+		PfGW456L13_4325	0.85	-0.2
4,837,197	+		PfGW456L13_4325	0.85	+2.2
4,837,198	-		PfGW456L13_4325	0.85	-0.4
4,837,198	-		PfGW456L13_4325	0.85	+1.3
4,837,198	-		PfGW456L13_4325	0.85	-0.2
4,837,198	-		PfGW456L13_4325	0.85	-1.1
4,837,198	-		PfGW456L13_4325	0.85	-0.9
4,837,198	-		PfGW456L13_4325	0.85	-0.1
4,837,227	+		PfGW456L13_4325	0.88	+0.1
4,837,227	+		PfGW456L13_4325	0.88	-0.5
4,837,228	-		PfGW456L13_4325	0.88	+0.3
4,837,228	-		PfGW456L13_4325	0.88	+1.3
4,837,228	-		PfGW456L13_4325	0.88	+0.5
4,837,228	-		PfGW456L13_4325	0.88	+0.1
4,837,228	-		PfGW456L13_4325	0.88	-0.5
4,837,228	-		PfGW456L13_4325	0.88	+0.3
4,837,272	+				+1.8
4,837,273	-				-1.6
4,837,297	+				-0.7
4,837,336	+				+0.4
4,837,336	+				+1.6
4,837,337	-				-1.9
4,837,337	-				+0.7
4,837,337	-				+0.1
4,837,449	-		PfGW456L13_4326	0.15	-1.7
4,837,449	-		PfGW456L13_4326	0.15	+0.7
4,837,449	-		PfGW456L13_4326	0.15	-0.9
4,837,512	+		PfGW456L13_4326	0.24	-0.7
4,837,512	+		PfGW456L13_4326	0.24	+0.9
4,837,512	+		PfGW456L13_4326	0.24	-0.7
4,837,512	+		PfGW456L13_4326	0.24	+0.3
4,837,512	+		PfGW456L13_4326	0.24	+0.3
4,837,512	+		PfGW456L13_4326	0.24	-0.5
4,837,512	+		PfGW456L13_4326	0.24	+0.7
4,837,513	-		PfGW456L13_4326	0.24	-0.8
4,837,513	-		PfGW456L13_4326	0.24	+0.6
4,837,513	-		PfGW456L13_4326	0.24	+0.8
4,837,513	-		PfGW456L13_4326	0.24	-1.7
4,837,513	-		PfGW456L13_4326	0.24	-1.3
4,837,513	-		PfGW456L13_4326	0.24	+0.5
4,837,513	-		PfGW456L13_4326	0.24	-1.2
4,837,516	+		PfGW456L13_4326	0.24	-0.1
4,837,517	-		PfGW456L13_4326	0.24	-0.2
4,837,686	+		PfGW456L13_4326	0.48	-0.7
4,837,686	+		PfGW456L13_4326	0.48	+0.5
4,837,686	+		PfGW456L13_4326	0.48	+0.9
4,837,687	-		PfGW456L13_4326	0.48	-2.2
4,837,764	+		PfGW456L13_4326	0.59	-1.1
4,837,764	+		PfGW456L13_4326	0.59	+0.2
4,837,764	+		PfGW456L13_4326	0.59	-0.4
4,837,764	+		PfGW456L13_4326	0.59	+0.1
4,837,764	+		PfGW456L13_4326	0.59	+0.9
4,837,765	-		PfGW456L13_4326	0.59	+0.4
4,837,765	-		PfGW456L13_4326	0.59	+1.2
4,837,765	-		PfGW456L13_4326	0.59	-0.2
4,838,022	+				+0.4
4,838,022	+				-0.1
4,838,022	+				-0.2
4,838,022	+				-0.6
4,838,022	+				+0.0
4,838,022	+				+0.7
4,838,022	+				+0.7
4,838,022	+				+0.1
4,838,022	+				+0.3
4,838,023	-				+0.3
4,838,023	-				+1.1
4,838,023	-				+0.4
4,838,023	-				+0.9
4,838,023	-				+0.2
4,838,023	-				+1.2
4,838,072	+				+0.5
4,838,072	+				-0.4
4,838,088	+				-0.4
4,838,089	-				+0.9
4,838,089	-				+1.3
4,838,089	-				-0.2
4,838,129	+				+1.2
4,838,129	+				+0.5
4,838,129	+				-2.4
4,838,129	+				+0.6
4,838,129	+				-0.1
4,838,130	-				-1.4
4,838,177	+				-1.4
4,838,177	+				+0.3
4,838,177	+				-0.1
4,838,177	+				+0.4
4,838,178	-				+0.6
4,838,300	+		PfGW456L13_4327	0.19	+1.1
4,838,300	+		PfGW456L13_4327	0.19	+0.7
4,838,300	+		PfGW456L13_4327	0.19	+0.1
4,838,301	-		PfGW456L13_4327	0.19	-0.0
4,838,301	-		PfGW456L13_4327	0.19	-3.4
4,838,345	+		PfGW456L13_4327	0.23	-1.0
4,838,346	-		PfGW456L13_4327	0.23	+0.6
4,838,346	-		PfGW456L13_4327	0.23	+1.6
4,838,346	-		PfGW456L13_4327	0.23	+1.9
4,838,448	+		PfGW456L13_4327	0.32	-1.4
4,838,620	-		PfGW456L13_4327	0.48	+1.5
4,838,730	-		PfGW456L13_4327	0.58	+0.3
4,838,792	+		PfGW456L13_4327	0.63	-0.7
4,838,792	+		PfGW456L13_4327	0.63	+1.0
4,838,792	+		PfGW456L13_4327	0.63	-1.2
4,838,793	-		PfGW456L13_4327	0.63	-0.8
4,838,793	-		PfGW456L13_4327	0.63	+0.3
4,839,041	+		PfGW456L13_4327	0.85	+0.3
4,839,042	-		PfGW456L13_4327	0.85	-1.3
4,839,042	-		PfGW456L13_4327	0.85	+0.9
4,839,208	-				+0.1
4,839,219	+				-0.5
4,839,219	+				-1.1
4,839,219	+				+0.4
4,839,219	+				+0.4
4,839,219	+				-0.6
4,839,219	+				+0.7
4,839,219	+				+0.1
4,839,220	-				+0.5
4,839,220	-				+0.2
4,839,220	-				-0.1
4,839,220	-				+0.3
4,839,262	-				+0.2
4,839,262	-				+0.1
4,839,262	-				-0.3
4,839,262	-				-0.2
4,839,391	+				-3.3
4,839,391	+				-0.2
4,839,391	+				+0.3
4,839,391	+				+0.6
4,839,391	+				+0.2
4,839,391	+				+0.5
4,839,391	+				-1.9
4,839,391	+				+0.1
4,839,392	-				-0.9
4,839,392	-				-0.7
4,839,392	-				+0.7
4,839,392	-				-0.2
4,839,392	-				+0.0
4,839,392	-				+0.3
4,839,392	-				+0.0
4,839,392	-				-1.8
4,839,518	+		PfGW456L13_4328	0.12	+0.1
4,839,519	-		PfGW456L13_4328	0.12	-0.5
4,839,519	-		PfGW456L13_4328	0.12	-1.1
4,839,519	-		PfGW456L13_4328	0.12	-0.3
4,839,728	+		PfGW456L13_4328	0.21	-0.1
4,839,728	+		PfGW456L13_4328	0.21	+0.1
4,839,728	+		PfGW456L13_4328	0.21	+0.9
4,839,728	+		PfGW456L13_4328	0.21	-2.5
4,839,729	-		PfGW456L13_4328	0.21	+0.9
4,839,729	-		PfGW456L13_4328	0.21	+0.6
4,839,729	-		PfGW456L13_4328	0.21	+0.6
4,839,799	+		PfGW456L13_4328	0.24	-0.3
4,839,851	+		PfGW456L13_4328	0.26	+0.4
4,839,851	+		PfGW456L13_4328	0.26	+1.5
4,839,852	-		PfGW456L13_4328	0.26	-1.3
4,839,852	-		PfGW456L13_4328	0.26	-0.4