Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1455

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
1,607,337	+		PfGW456L13_1453	0.62	+0.2
1,607,338	-		PfGW456L13_1453	0.63	+1.5
1,607,338	-		PfGW456L13_1453	0.63	+0.8
1,607,338	-		PfGW456L13_1453	0.63	+0.5
1,607,554	+		PfGW456L13_1453	0.75	+1.6
1,607,554	+		PfGW456L13_1453	0.75	+0.2
1,607,555	-		PfGW456L13_1453	0.76	+1.5
1,607,555	-		PfGW456L13_1453	0.76	+1.2
1,607,555	-		PfGW456L13_1453	0.76	+0.7
1,607,555	-		PfGW456L13_1453	0.76	-2.1
1,607,555	-		PfGW456L13_1453	0.76	+2.7
1,607,571	+		PfGW456L13_1453	0.77	+1.3
1,607,571	+		PfGW456L13_1453	0.77	+1.6
1,607,572	-		PfGW456L13_1453	0.77	+0.8
1,607,572	-		PfGW456L13_1453	0.77	+0.8
1,607,572	-		PfGW456L13_1453	0.77	+1.4
1,607,575	+		PfGW456L13_1453	0.77	+0.9
1,607,575	+		PfGW456L13_1453	0.77	+1.1
1,607,575	+		PfGW456L13_1453	0.77	+0.4
1,607,575	+		PfGW456L13_1453	0.77	-1.1
1,607,575	+		PfGW456L13_1453	0.77	+1.3
1,607,575	+		PfGW456L13_1453	0.77	+1.4
1,607,575	+		PfGW456L13_1453	0.77	+2.3
1,607,575	+		PfGW456L13_1453	0.77	+1.0
1,607,575	+		PfGW456L13_1453	0.77	+0.3
1,607,575	+		PfGW456L13_1453	0.77	+0.7
1,607,575	+		PfGW456L13_1453	0.77	+1.3
1,607,575	+		PfGW456L13_1453	0.77	-1.0
1,607,575	+		PfGW456L13_1453	0.77	+0.9
1,607,575	+		PfGW456L13_1453	0.77	+0.9
1,607,575	+		PfGW456L13_1453	0.77	-0.6
1,607,575	+		PfGW456L13_1453	0.77	+2.3
1,607,575	+		PfGW456L13_1453	0.77	+1.1
1,607,576	-		PfGW456L13_1453	0.77	+1.1
1,607,576	-		PfGW456L13_1453	0.77	+0.5
1,607,576	-		PfGW456L13_1453	0.77	+1.8
1,607,576	-		PfGW456L13_1453	0.77	-0.4
1,607,576	-		PfGW456L13_1453	0.77	-1.3
1,607,576	-		PfGW456L13_1453	0.77	+0.7
1,607,871	+				+1.7
1,607,871	+				-3.3
1,607,871	+				-0.5
1,607,871	+				+0.5
1,607,871	+				+2.6
1,607,872	-				+1.4
1,607,872	-				+0.9
1,607,872	-				+1.7
1,607,872	-				+1.3
1,607,872	-				+1.4
1,607,872	-				-0.1
1,607,875	+				+0.8
1,607,875	+				+0.6
1,607,875	+				+0.4
1,607,875	+				-0.5
1,607,875	+				+0.5
1,607,875	+				-2.3
1,607,875	+				+0.4
1,607,876	-				-0.8
1,607,876	-				+1.8
1,607,876	-				+1.4
1,607,884	+				+0.3
1,607,885	-				+0.0
1,607,939	+				+0.5
1,607,939	+				+0.6
1,607,939	+				-3.3
1,607,939	+				+2.0
1,607,940	-				-1.3
1,607,940	-				-0.8
1,607,940	-				-0.2
1,607,940	-				-0.4
1,607,940	-				+1.3
1,607,940	-				+0.6
1,607,940	-				+0.8
1,607,940	-				+0.0
1,607,940	-				-1.0
1,607,978	+				+1.6
1,608,029	+				+0.5
1,608,184	+		PfGW456L13_1454	0.61	-0.9
1,608,190	-		PfGW456L13_1454	0.63	+1.0
1,608,259	-		PfGW456L13_1454	0.89	+0.6
1,608,289	+				-0.3
1,608,402	+				-1.8
1,608,436	+				-0.8
1,608,437	-				-0.1
1,608,437	-				-0.5
1,608,574	+		PfGW456L13_1455	0.20	-1.7
1,608,574	+		PfGW456L13_1455	0.20	+0.1
1,608,574	+		PfGW456L13_1455	0.20	-0.3
1,608,574	+		PfGW456L13_1455	0.20	-3.1
1,608,714	+		PfGW456L13_1455	0.30	-0.4
1,608,715	-		PfGW456L13_1455	0.30	-1.7
1,608,715	-		PfGW456L13_1455	0.30	-0.1
1,608,794	+		PfGW456L13_1455	0.36	-1.3
1,608,807	+		PfGW456L13_1455	0.37	-0.7
1,608,850	+		PfGW456L13_1455	0.40	+0.0
1,608,850	+		PfGW456L13_1455	0.40	-0.8
1,608,850	+		PfGW456L13_1455	0.40	-0.3
1,608,851	-		PfGW456L13_1455	0.40	+0.2
1,608,952	+		PfGW456L13_1455	0.48	-0.9
1,608,952	+		PfGW456L13_1455	0.48	-0.5
1,608,953	-		PfGW456L13_1455	0.48	-0.3
1,608,953	-		PfGW456L13_1455	0.48	-0.6
1,608,953	-		PfGW456L13_1455	0.48	+1.0
1,608,999	+		PfGW456L13_1455	0.51	-1.1
1,608,999	+		PfGW456L13_1455	0.51	-0.8
1,608,999	+		PfGW456L13_1455	0.51	-0.4
1,609,000	-		PfGW456L13_1455	0.52	+0.8
1,609,000	-		PfGW456L13_1455	0.52	-0.9
1,609,000	-		PfGW456L13_1455	0.52	+0.4
1,609,007	+		PfGW456L13_1455	0.52	-2.1
1,609,108	+		PfGW456L13_1455	0.60	-1.7
1,609,109	-		PfGW456L13_1455	0.60	-2.8
1,609,166	+		PfGW456L13_1455	0.64	-0.7
1,609,166	+		PfGW456L13_1455	0.64	-1.6
1,609,166	+		PfGW456L13_1455	0.64	-0.1
1,609,166	+		PfGW456L13_1455	0.64	+0.1
1,609,167	-		PfGW456L13_1455	0.64	-0.2
1,609,167	-		PfGW456L13_1455	0.64	-1.0
1,609,167	-		PfGW456L13_1455	0.64	-0.6
1,609,167	-		PfGW456L13_1455	0.64	-1.6
1,609,167	-		PfGW456L13_1455	0.64	+0.2
1,609,549	+				-0.4
1,609,576	+				-2.3
1,609,576	+				-0.1
1,609,576	+				-1.7
1,609,576	+				-1.2
1,609,576	+				-1.3
1,609,577	-				-1.0
1,609,577	-				+1.6
1,609,577	-				-0.7
1,609,645	+				-0.7
1,609,645	+				+0.6
1,609,646	-				-0.9
1,609,646	-				-0.7
1,609,646	-				-1.0
1,609,671	+				+0.4
1,609,671	+				-0.7
1,609,671	+				+0.1
1,609,671	+				+1.0
1,609,672	-				-2.4
1,609,672	-				-1.1
1,609,806	+		PfGW456L13_1456	0.33	-0.5
1,609,837	+		PfGW456L13_1456	0.39	+1.9
1,609,837	+		PfGW456L13_1456	0.39	+0.6
1,609,837	+		PfGW456L13_1456	0.39	+1.5
1,609,838	-		PfGW456L13_1456	0.39	+2.7
1,609,838	-		PfGW456L13_1456	0.39	+0.7
1,609,921	+		PfGW456L13_1456	0.56	+1.0
1,609,921	+		PfGW456L13_1456	0.56	+0.4
1,609,921	+		PfGW456L13_1456	0.56	+0.7
1,609,922	-		PfGW456L13_1456	0.56	-0.8
1,610,053	+		PfGW456L13_1456	0.83	+0.1
1,610,053	+		PfGW456L13_1456	0.83	-0.4
1,610,054	-		PfGW456L13_1456	0.83	-0.7
1,610,054	-		PfGW456L13_1456	0.83	-0.8
1,610,054	-		PfGW456L13_1456	0.83	-0.2
1,610,111	+				+0.8
1,610,111	+				+1.0
1,610,111	+				-1.4
1,610,112	-				-2.1
1,610,112	-				+0.0
1,610,112	-				-1.6
1,610,154	+				+0.7
1,610,154	+				+1.3
1,610,154	+				+2.5
1,610,155	-				-0.5
1,610,155	-				-0.9
1,610,210	+				+0.5
1,610,210	+				-2.4
1,610,210	+				+0.7
1,610,210	+				+0.3
1,610,211	-				-0.2
1,610,211	-				+0.5
1,610,222	+				+0.6
1,610,361	+				-1.0
1,610,361	+				+0.5
1,610,361	+				+0.6
1,610,362	-				-0.5
1,610,459	+				-0.6