Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29730

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
6,605,495	+				+1.3
6,605,495	+				-1.4
6,605,495	+				-1.5
6,605,495	+				-1.2
6,605,495	+				-0.3
6,605,495	+				+1.4
6,605,495	+				+0.8
6,605,495	+				-1.1
6,605,495	+				+0.5
6,605,496	-				-2.4
6,605,496	-				+1.8
6,605,496	-				-0.7
6,605,496	-				-2.3
6,605,496	-				-1.6
6,605,496	-				-0.6
6,605,496	-				-0.1
6,605,496	-				-0.6
6,605,496	-				+0.5
6,605,496	-				-0.7
6,605,496	-				-1.7
6,605,496	-				-0.6
6,605,583	+				-1.9
6,605,583	+				+1.1
6,605,583	+				-0.5
6,605,584	-				-2.4
6,605,584	-				-1.3
6,605,584	-				-0.1
6,605,584	-				-2.3
6,605,584	-				+0.2
6,605,603	-				+0.2
6,605,611	+				-0.3
6,605,615	+				-2.2
6,605,615	+				-0.8
6,605,615	+				+0.3
6,605,615	+				+0.1
6,605,615	+				-0.5
6,605,616	-				+1.0
6,605,616	-				+0.4
6,605,616	-				-0.3
6,605,616	-				-1.1
6,605,616	-				-0.4
6,605,616	-				-2.0
6,605,634	+				+0.1
6,605,634	+				+1.4
6,605,634	+				+0.5
6,605,634	+				-0.1
6,605,634	+				-2.2
6,605,634	+				-1.1
6,605,634	+				+1.3
6,605,635	-				+2.4
6,605,635	-				-0.9
6,605,635	-				-0.9
6,605,635	-				-1.2
6,605,635	-				+1.0
6,605,964	+		PFLU_RS29725	0.44	+0.7
6,605,964	+		PFLU_RS29725	0.44	+0.1
6,605,964	+		PFLU_RS29725	0.44	-0.4
6,605,964	+		PFLU_RS29725	0.44	+0.3
6,605,964	+		PFLU_RS29725	0.44	-0.2
6,605,964	+		PFLU_RS29725	0.44	-0.1
6,605,964	+		PFLU_RS29725	0.44	-2.4
6,605,964	+		PFLU_RS29725	0.44	+1.8
6,605,964	+		PFLU_RS29725	0.44	-2.3
6,605,964	+		PFLU_RS29725	0.44	+2.8
6,605,964	+		PFLU_RS29725	0.44	+1.1
6,605,964	+		PFLU_RS29725	0.44	-0.0
6,605,964	+		PFLU_RS29725	0.44	-0.8
6,605,964	+		PFLU_RS29725	0.44	-1.5
6,605,964	+		PFLU_RS29725	0.44	-0.5
6,605,964	+		PFLU_RS29725	0.44	+0.1
6,605,964	+		PFLU_RS29725	0.44	+1.4
6,605,964	+		PFLU_RS29725	0.44	+1.2
6,605,964	+		PFLU_RS29725	0.44	+0.3
6,605,964	+		PFLU_RS29725	0.44	+0.8
6,605,964	+		PFLU_RS29725	0.44	+1.5
6,605,965	-		PFLU_RS29725	0.44	+0.3
6,605,965	-		PFLU_RS29725	0.44	-1.2
6,605,965	-		PFLU_RS29725	0.44	-0.0
6,605,965	-		PFLU_RS29725	0.44	+0.1
6,605,965	-		PFLU_RS29725	0.44	-1.7
6,605,965	-		PFLU_RS29725	0.44	+0.2
6,605,965	-		PFLU_RS29725	0.44	+0.8
6,605,965	-		PFLU_RS29725	0.44	-0.4
6,605,965	-		PFLU_RS29725	0.44	+1.3
6,605,965	-		PFLU_RS29725	0.44	+1.2
6,605,965	-		PFLU_RS29725	0.44	+2.9
6,605,965	-		PFLU_RS29725	0.44	-0.7
6,605,965	-		PFLU_RS29725	0.44	+0.4
6,605,965	-		PFLU_RS29725	0.44	-2.0
6,605,965	-		PFLU_RS29725	0.44	+1.2
6,606,017	-		PFLU_RS29725	0.52	+1.3
6,606,180	+		PFLU_RS29725	0.76	-1.3
6,606,180	+		PFLU_RS29725	0.76	-2.5
6,606,181	-		PFLU_RS29725	0.76	+0.5
6,606,183	-		PFLU_RS29725	0.76	-1.0
6,606,225	+		PFLU_RS29725	0.82	-2.4
6,606,225	+		PFLU_RS29725	0.82	+1.2
6,606,225	+		PFLU_RS29725	0.82	-0.2
6,606,225	+		PFLU_RS29725	0.82	+0.5
6,606,225	+		PFLU_RS29725	0.82	+1.3
6,606,225	+		PFLU_RS29725	0.82	-0.5
6,606,225	+		PFLU_RS29725	0.82	+1.9
6,606,225	+		PFLU_RS29725	0.82	-0.9
6,606,226	-		PFLU_RS29725	0.82	+3.1
6,606,226	-		PFLU_RS29725	0.82	+2.1
6,606,226	-		PFLU_RS29725	0.82	-1.0
6,606,226	-		PFLU_RS29725	0.82	-1.6
6,606,226	-		PFLU_RS29725	0.82	+0.5
6,606,226	-		PFLU_RS29725	0.82	+0.6
6,606,226	-		PFLU_RS29725	0.82	-1.4
6,606,226	-		PFLU_RS29725	0.82	+0.9
6,606,226	-		PFLU_RS29725	0.82	+1.0
6,606,226	-		PFLU_RS29725	0.82	+3.2
6,606,226	-		PFLU_RS29725	0.82	+1.0
6,606,226	-		PFLU_RS29725	0.82	+0.5
6,606,254	+		PFLU_RS29725	0.86	-0.1
6,606,254	+		PFLU_RS29725	0.86	-2.1
6,606,288	+				+0.9
6,606,288	+				+0.5
6,606,302	-				+1.0
6,606,302	-				-0.7
6,606,358	+				+0.7
6,606,358	+				-0.2
6,606,359	-				+0.2
6,606,359	-				+0.9
6,606,461	+				+2.2
6,606,461	+				+1.4
6,606,462	-				+0.5
6,606,462	-				-1.9
6,606,462	-				-0.9
6,606,462	-				+0.1
6,606,462	-				+0.3
6,606,469	+				+0.5
6,606,472	+				-0.1
6,606,472	+				+2.9
6,606,472	+				-0.9
6,606,473	-				+1.5
6,606,505	+				-0.4
6,606,505	+				+0.3
6,606,505	+				-2.2
6,606,505	+				+0.8
6,606,505	+				+1.0
6,606,506	-				+0.3
6,606,506	-				+1.0
6,606,622	+		PFLU_RS29730	0.18	+0.8
6,606,622	+		PFLU_RS29730	0.18	+1.5
6,606,622	+		PFLU_RS29730	0.18	-1.1
6,606,622	+		PFLU_RS29730	0.18	+0.6
6,606,622	+		PFLU_RS29730	0.18	+1.1
6,606,622	+		PFLU_RS29730	0.18	+0.0
6,606,623	-		PFLU_RS29730	0.18	+0.1
6,606,623	-		PFLU_RS29730	0.18	-1.5
6,606,623	-		PFLU_RS29730	0.18	+1.2
6,606,623	-		PFLU_RS29730	0.18	-1.8
6,606,623	-		PFLU_RS29730	0.18	+2.4
6,606,623	-		PFLU_RS29730	0.18	-2.0
6,606,623	-		PFLU_RS29730	0.18	+0.1
6,606,847	+		PFLU_RS29730	0.35	-0.5
6,606,848	-		PFLU_RS29730	0.35	+2.0
6,606,865	+		PFLU_RS29730	0.36	+1.5
6,606,865	+		PFLU_RS29730	0.36	+2.4
6,606,865	+		PFLU_RS29730	0.36	+0.8
6,606,866	-		PFLU_RS29730	0.36	+0.8
6,606,866	-		PFLU_RS29730	0.36	+1.4
6,606,922	+		PFLU_RS29730	0.41	+1.1
6,606,922	+		PFLU_RS29730	0.41	+0.6
6,606,922	+		PFLU_RS29730	0.41	+1.9
6,606,922	+		PFLU_RS29730	0.41	+2.4
6,606,922	+		PFLU_RS29730	0.41	+0.4
6,606,923	-		PFLU_RS29730	0.41	-0.1
6,606,923	-		PFLU_RS29730	0.41	-1.0
6,606,923	-		PFLU_RS29730	0.41	+1.0
6,606,923	-		PFLU_RS29730	0.41	-0.3
6,607,390	+		PFLU_RS29730	0.76	+1.4
6,607,390	+		PFLU_RS29730	0.76	+0.5
6,607,390	+		PFLU_RS29730	0.76	+0.4
6,607,390	+		PFLU_RS29730	0.76	-0.9
6,607,390	+		PFLU_RS29730	0.76	+1.5
6,607,390	+		PFLU_RS29730	0.76	+2.3
6,607,391	-		PFLU_RS29730	0.76	-0.5
6,607,391	-		PFLU_RS29730	0.76	-1.4
6,607,391	-		PFLU_RS29730	0.76	+1.3
6,607,391	-		PFLU_RS29730	0.76	-0.2
6,607,391	-		PFLU_RS29730	0.76	+0.9
6,607,391	-		PFLU_RS29730	0.76	+0.7
6,607,391	-		PFLU_RS29730	0.76	+0.5
6,607,592	+				-2.6
6,607,593	-				+1.6
6,607,641	+				+1.8
6,607,641	+				+3.8
6,607,641	+				+1.6
6,607,641	+				+1.3
6,607,641	+				-1.9
6,607,641	+				+0.4
6,607,641	+				-2.5
6,607,642	-				+2.4
6,607,642	-				+0.3
6,607,642	-				-2.3
6,607,642	-				-1.7
6,607,642	-				+1.0
6,607,705	+				-0.2
6,607,719	+				-1.1
6,607,727	+				-2.5
6,607,727	+				+0.0
6,607,727	+				+2.6
6,607,727	+				-1.7
6,607,728	-				-2.3
6,607,728	-				-2.5
6,607,770	+				-1.0
6,607,770	+				-2.1
6,607,770	+				-1.8
6,607,770	+				-0.4
6,607,770	+				-1.9
6,607,770	+				+0.6
6,607,771	-				-1.7
6,607,771	-				+0.5
6,607,771	-				-2.6
6,607,771	-				-0.6
6,607,771	-				+0.4
6,607,771	-				+0.3
6,607,771	-				-0.1
6,607,771	-				-0.3
6,607,771	-				-2.5
6,607,771	-				-0.6
6,607,771	-				-0.4
6,607,771	-				+0.2
6,607,828	+				+2.2
6,607,841	+				-1.6
6,607,841	+				-1.9
6,607,842	-				-1.9
6,607,898	-				+2.7
6,607,944	+				+1.6
6,607,944	+				+1.3
6,607,944	+				-0.8
6,607,944	+				+0.2
6,607,944	+				-3.0
6,607,944	+				+1.5
6,607,944	+				+0.0
6,607,945	-				+0.9
6,607,945	-				-1.4
6,607,945	-				+0.8
6,607,945	-				-1.2
6,607,945	-				+3.3
6,607,945	-				+0.3
6,607,945	-				-1.3
6,608,053	-				-3.2
6,608,053	-				-1.5
6,608,186	+		PFLU_RS29735	0.16	-2.3
6,608,186	+		PFLU_RS29735	0.16	-0.4
6,608,187	-		PFLU_RS29735	0.16	-2.0
6,608,187	-		PFLU_RS29735	0.16	-0.1
6,608,354	+		PFLU_RS29735	0.28	+0.8
6,608,444	+		PFLU_RS29735	0.35	-0.3
6,608,444	+		PFLU_RS29735	0.35	+1.2
6,608,445	-		PFLU_RS29735	0.35	-2.4
6,608,445	-		PFLU_RS29735	0.35	-1.5
6,608,445	-		PFLU_RS29735	0.35	-2.3
6,608,453	+		PFLU_RS29735	0.36	+0.3
6,608,454	-		PFLU_RS29735	0.36	+1.0
6,608,454	-		PFLU_RS29735	0.36	-2.4
6,608,466	-		PFLU_RS29735	0.37	-0.1
6,608,466	-		PFLU_RS29735	0.37	-2.1
6,608,466	-		PFLU_RS29735	0.37	-1.9
6,608,477	+		PFLU_RS29735	0.37	+1.5
6,608,477	+		PFLU_RS29735	0.37	+1.0
6,608,477	+		PFLU_RS29735	0.37	-0.9
6,608,477	+		PFLU_RS29735	0.37	-2.6
6,608,478	-		PFLU_RS29735	0.37	-0.5
6,608,478	-		PFLU_RS29735	0.37	-1.9
6,608,555	+		PFLU_RS29735	0.43	-1.5
6,608,555	+		PFLU_RS29735	0.43	-0.9
6,608,556	-		PFLU_RS29735	0.43	+1.5
6,608,556	-		PFLU_RS29735	0.43	-0.5
6,608,556	-		PFLU_RS29735	0.43	-1.6
6,608,556	-		PFLU_RS29735	0.43	-0.4
6,608,628	+		PFLU_RS29735	0.49	-1.4
6,608,629	-		PFLU_RS29735	0.49	-1.3