Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS24890 and PFLU_RS24895 are separated by 62 nucleotides PFLU_RS24895 and PFLU_RS24900 are separated by 43 nucleotides
PFLU_RS24890: PFLU_RS24890 - protein translocase subunit SecD, at 5,572,507 to 5,574,375
_RS24890
PFLU_RS24895: PFLU_RS24895 - preprotein translocase subunit YajC, at 5,574,438 to 5,574,776
_RS24895
PFLU_RS24900: PFLU_RS24900 - tRNA guanosine(34) transglycosylase Tgt, at 5,574,820 to 5,575,944
_RS24900
Position (kb) 5574
5575 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5574.436 kb on - strand at 5574.436 kb on - strand at 5574.436 kb on - strand at 5574.436 kb on - strand at 5574.436 kb on - strand at 5574.436 kb on - strand at 5574.436 kb on - strand at 5574.440 kb on - strand at 5574.440 kb on - strand at 5574.440 kb on - strand at 5574.440 kb on - strand at 5574.440 kb on - strand at 5574.440 kb on - strand at 5574.440 kb on - strand at 5574.440 kb on - strand at 5574.665 kb on - strand, within PFLU_RS24895 at 5574.665 kb on - strand, within PFLU_RS24895 at 5574.665 kb on - strand, within PFLU_RS24895 at 5574.717 kb on - strand, within PFLU_RS24895 at 5574.759 kb on - strand at 5574.759 kb on - strand at 5574.765 kb on - strand at 5574.779 kb on - strand at 5574.779 kb on - strand at 5574.779 kb on - strand at 5574.779 kb on - strand at 5574.779 kb on - strand at 5574.858 kb on - strand at 5574.858 kb on - strand at 5574.886 kb on - strand at 5574.886 kb on - strand at 5574.886 kb on - strand at 5574.886 kb on - strand at 5574.886 kb on - strand at 5574.886 kb on - strand at 5574.898 kb on - strand at 5574.951 kb on + strand, within PFLU_RS24900 at 5574.951 kb on + strand, within PFLU_RS24900 at 5574.951 kb on + strand, within PFLU_RS24900 at 5574.951 kb on + strand, within PFLU_RS24900 at 5574.952 kb on - strand, within PFLU_RS24900 at 5574.952 kb on - strand, within PFLU_RS24900 at 5575.001 kb on + strand, within PFLU_RS24900 at 5575.002 kb on - strand, within PFLU_RS24900 at 5575.002 kb on - strand, within PFLU_RS24900 at 5575.002 kb on - strand, within PFLU_RS24900 at 5575.002 kb on - strand, within PFLU_RS24900 at 5575.028 kb on + strand, within PFLU_RS24900 at 5575.028 kb on + strand, within PFLU_RS24900 at 5575.028 kb on + strand, within PFLU_RS24900 at 5575.028 kb on + strand, within PFLU_RS24900 at 5575.028 kb on + strand, within PFLU_RS24900 at 5575.028 kb on + strand, within PFLU_RS24900 at 5575.029 kb on - strand, within PFLU_RS24900 at 5575.029 kb on - strand, within PFLU_RS24900 at 5575.029 kb on - strand, within PFLU_RS24900 at 5575.029 kb on - strand, within PFLU_RS24900 at 5575.029 kb on - strand, within PFLU_RS24900 at 5575.081 kb on - strand, within PFLU_RS24900 at 5575.213 kb on - strand, within PFLU_RS24900 at 5575.218 kb on - strand, within PFLU_RS24900 at 5575.253 kb on + strand, within PFLU_RS24900 at 5575.254 kb on - strand, within PFLU_RS24900 at 5575.357 kb on - strand, within PFLU_RS24900
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 5,574,436 - -2.1 5,574,436 - -2.1 5,574,436 - -0.5 5,574,436 - -2.0 5,574,436 - -0.9 5,574,436 - -3.0 5,574,436 - -1.2 5,574,440 - -2.1 5,574,440 - +2.7 5,574,440 - +1.5 5,574,440 - +1.1 5,574,440 - -0.0 5,574,440 - -1.2 5,574,440 - +0.8 5,574,440 - +0.6 5,574,665 - PFLU_RS24895 0.67 +0.1 5,574,665 - PFLU_RS24895 0.67 +0.9 5,574,665 - PFLU_RS24895 0.67 +0.9 5,574,717 - PFLU_RS24895 0.82 +0.9 5,574,759 - +0.1 5,574,759 - +0.4 5,574,765 - -0.1 5,574,779 - +0.4 5,574,779 - +1.9 5,574,779 - +0.4 5,574,779 - -0.6 5,574,779 - -1.5 5,574,858 - +2.4 5,574,858 - -0.7 5,574,886 - +2.6 5,574,886 - +0.6 5,574,886 - +2.4 5,574,886 - +0.9 5,574,886 - +0.9 5,574,886 - +2.4 5,574,898 - +0.4 5,574,951 + PFLU_RS24900 0.12 +2.4 5,574,951 + PFLU_RS24900 0.12 +0.4 5,574,951 + PFLU_RS24900 0.12 +1.4 5,574,951 + PFLU_RS24900 0.12 +2.4 5,574,952 - PFLU_RS24900 0.12 +1.4 5,574,952 - PFLU_RS24900 0.12 +0.9 5,575,001 + PFLU_RS24900 0.16 +0.9 5,575,002 - PFLU_RS24900 0.16 -0.7 5,575,002 - PFLU_RS24900 0.16 +0.9 5,575,002 - PFLU_RS24900 0.16 -0.4 5,575,002 - PFLU_RS24900 0.16 +0.9 5,575,028 + PFLU_RS24900 0.18 +3.0 5,575,028 + PFLU_RS24900 0.18 +1.4 5,575,028 + PFLU_RS24900 0.18 -0.4 5,575,028 + PFLU_RS24900 0.18 +1.8 5,575,028 + PFLU_RS24900 0.18 +1.4 5,575,028 + PFLU_RS24900 0.18 -1.3 5,575,029 - PFLU_RS24900 0.19 +1.4 5,575,029 - PFLU_RS24900 0.19 +1.4 5,575,029 - PFLU_RS24900 0.19 -0.6 5,575,029 - PFLU_RS24900 0.19 -0.4 5,575,029 - PFLU_RS24900 0.19 +1.1 5,575,081 - PFLU_RS24900 0.23 +1.4 5,575,213 - PFLU_RS24900 0.35 -0.3 5,575,218 - PFLU_RS24900 0.35 -0.1 5,575,253 + PFLU_RS24900 0.38 +2.4 5,575,254 - PFLU_RS24900 0.39 +0.1 5,575,357 - PFLU_RS24900 0.48 +0.9
Or see this region's nucleotide sequence