Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS23730

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
5,316,971	-		PFLU_RS23725	0.55	+2.2
5,317,030	+		PFLU_RS23725	0.59	+2.3
5,317,030	+		PFLU_RS23725	0.59	+4.7
5,317,030	+		PFLU_RS23725	0.59	+4.3
5,317,030	+		PFLU_RS23725	0.59	+1.3
5,317,030	+		PFLU_RS23725	0.59	+0.3
5,317,030	+		PFLU_RS23725	0.59	+2.3
5,317,030	+		PFLU_RS23725	0.59	+2.3
5,317,030	+		PFLU_RS23725	0.59	+2.3
5,317,030	+		PFLU_RS23725	0.59	+0.8
5,317,031	-		PFLU_RS23725	0.59	-0.8
5,317,031	-		PFLU_RS23725	0.59	-1.0
5,317,031	-		PFLU_RS23725	0.59	-0.8
5,317,031	-		PFLU_RS23725	0.59	+0.0
5,317,031	-		PFLU_RS23725	0.59	-2.2
5,317,031	-		PFLU_RS23725	0.59	-1.5
5,317,031	-		PFLU_RS23725	0.59	+1.5
5,317,031	-		PFLU_RS23725	0.59	+0.4
5,317,112	-		PFLU_RS23725	0.64	+0.6
5,317,126	+		PFLU_RS23725	0.65	+1.3
5,317,127	-		PFLU_RS23725	0.65	-1.2
5,317,270	+		PFLU_RS23725	0.75	+2.3
5,317,271	-		PFLU_RS23725	0.75	+1.1
5,317,294	+		PFLU_RS23725	0.77	+2.3
5,317,342	+		PFLU_RS23725	0.80	+2.3
5,317,342	+		PFLU_RS23725	0.80	+2.3
5,317,343	-		PFLU_RS23725	0.80	+1.6
5,317,343	-		PFLU_RS23725	0.80	+2.1
5,317,343	-		PFLU_RS23725	0.80	-2.3
5,317,343	-		PFLU_RS23725	0.80	-0.5
5,317,343	-		PFLU_RS23725	0.80	-0.4
5,317,375	+		PFLU_RS23725	0.82	+2.3
5,317,375	+		PFLU_RS23725	0.82	+5.1
5,317,376	-		PFLU_RS23725	0.82	+0.2
5,317,376	-		PFLU_RS23725	0.82	+1.5
5,317,376	-		PFLU_RS23725	0.82	+0.7
5,317,376	-		PFLU_RS23725	0.82	-2.4
5,317,376	-		PFLU_RS23725	0.82	+1.2
5,317,376	-		PFLU_RS23725	0.82	-1.5
5,317,376	-		PFLU_RS23725	0.82	-2.6
5,317,376	-		PFLU_RS23725	0.82	-2.8
5,317,376	-		PFLU_RS23725	0.82	-1.7
5,317,376	-		PFLU_RS23725	0.82	+0.1
5,317,376	-		PFLU_RS23725	0.82	-1.7
5,317,376	-		PFLU_RS23725	0.82	-1.1
5,317,376	-		PFLU_RS23725	0.82	+3.3
5,317,376	-		PFLU_RS23725	0.82	-1.7
5,317,376	-		PFLU_RS23725	0.82	-2.9
5,317,432	+		PFLU_RS23725	0.86	+1.3
5,317,433	-		PFLU_RS23725	0.86	+1.3
5,317,433	-		PFLU_RS23725	0.86	-1.4
5,317,433	-		PFLU_RS23725	0.86	+0.1
5,317,547	-				+6.2
5,317,560	+				+1.3
5,317,560	+				+0.8
5,317,617	+				+0.7
5,317,617	+				+1.5
5,317,617	+				+4.1
5,317,618	-				+3.3
5,317,649	+				-0.4
5,317,649	+				+2.0
5,317,650	-				+0.7
5,317,657	+				-0.1
5,317,657	+				-0.7
5,317,658	-				-0.6
5,317,662	+				+1.6
5,317,663	-				+1.5
5,317,668	+				+0.4
5,317,702	+				-0.7
5,317,705	+				-1.8
5,317,706	-				+1.5
5,317,706	-				-0.7
5,317,706	-				+1.2
5,317,708	+				-0.7
5,317,708	+				-2.6
5,317,708	+				+0.1
5,317,757	+				+1.2
5,317,757	+				-0.9
5,317,766	+				+2.9
5,317,766	+				-0.1
5,317,767	-				+1.6
5,317,767	-				-1.3
5,317,771	+				+0.0
5,317,772	-				+0.7
5,317,794	-				+0.1
5,317,812	+				-2.9
5,317,812	+				-0.7
5,317,812	+				+0.4
5,317,813	-				-1.7
5,318,093	+		PFLU_RS23730	0.29	-1.6
5,318,093	+		PFLU_RS23730	0.29	-1.3
5,318,093	+		PFLU_RS23730	0.29	-2.3
5,318,093	+		PFLU_RS23730	0.29	+0.2
5,318,094	-		PFLU_RS23730	0.29	-1.0
5,318,094	-		PFLU_RS23730	0.29	-1.1
5,318,094	-		PFLU_RS23730	0.29	-0.8
5,318,094	-		PFLU_RS23730	0.29	+0.0
5,318,094	-		PFLU_RS23730	0.29	-0.5
5,318,136	-		PFLU_RS23730	0.34	-2.4
5,318,405	+		PFLU_RS23730	0.64	-2.3
5,318,406	-		PFLU_RS23730	0.65	-0.9
5,318,444	-		PFLU_RS23730	0.69	-1.6
5,318,555	+		PFLU_RS23730	0.82	-0.6
5,318,555	+		PFLU_RS23730	0.82	-2.0
5,318,555	+		PFLU_RS23730	0.82	-2.1
5,318,555	+		PFLU_RS23730	0.82	+0.1
5,318,555	+		PFLU_RS23730	0.82	+0.3
5,318,555	+		PFLU_RS23730	0.82	-1.4
5,318,555	+		PFLU_RS23730	0.82	-2.9
5,318,555	+		PFLU_RS23730	0.82	-2.8
5,318,555	+		PFLU_RS23730	0.82	-0.7
5,318,555	+		PFLU_RS23730	0.82	-1.1
5,318,555	+		PFLU_RS23730	0.82	-0.3
5,318,555	+		PFLU_RS23730	0.82	-1.6
5,318,555	+		PFLU_RS23730	0.82	+1.2
5,318,555	+		PFLU_RS23730	0.82	-0.6
5,318,555	+		PFLU_RS23730	0.82	-0.2
5,318,555	+		PFLU_RS23730	0.82	-2.6
5,318,555	+		PFLU_RS23730	0.82	-2.6
5,318,555	+		PFLU_RS23730	0.82	-2.2
5,318,555	+		PFLU_RS23730	0.82	-0.5
5,318,555	+		PFLU_RS23730	0.82	-1.1
5,318,555	+		PFLU_RS23730	0.82	-1.2
5,318,555	+		PFLU_RS23730	0.82	-0.3
5,318,555	+		PFLU_RS23730	0.82	-0.7
5,318,555	+		PFLU_RS23730	0.82	-1.0
5,318,555	+		PFLU_RS23730	0.82	+0.3
5,318,555	+		PFLU_RS23730	0.82	-0.3
5,318,555	+		PFLU_RS23730	0.82	-1.9
5,318,555	+		PFLU_RS23730	0.82	-0.9
5,318,555	+		PFLU_RS23730	0.82	+2.7
5,318,555	+		PFLU_RS23730	0.82	-1.9
5,318,555	+		PFLU_RS23730	0.82	-1.1
5,318,555	+		PFLU_RS23730	0.82	-2.1
5,318,555	+		PFLU_RS23730	0.82	-0.7
5,318,555	+		PFLU_RS23730	0.82	-0.5
5,318,555	+		PFLU_RS23730	0.82	-0.8
5,318,555	+		PFLU_RS23730	0.82	-1.6
5,318,555	+		PFLU_RS23730	0.82	-0.0
5,318,555	+		PFLU_RS23730	0.82	-0.4
5,318,555	+		PFLU_RS23730	0.82	-2.3
5,318,555	+		PFLU_RS23730	0.82	-1.4
5,318,555	+		PFLU_RS23730	0.82	-3.3
5,318,555	+		PFLU_RS23730	0.82	-1.0
5,318,555	+		PFLU_RS23730	0.82	-0.2
5,318,555	+		PFLU_RS23730	0.82	+0.0
5,318,555	+		PFLU_RS23730	0.82	-3.0
5,318,555	+		PFLU_RS23730	0.82	-1.1
5,318,555	+		PFLU_RS23730	0.82	-2.1
5,318,555	+		PFLU_RS23730	0.82	-1.6
5,318,555	+		PFLU_RS23730	0.82	+0.3
5,318,555	+		PFLU_RS23730	0.82	-1.4
5,318,555	+		PFLU_RS23730	0.82	-0.8
5,318,555	+		PFLU_RS23730	0.82	-1.7
5,318,555	+		PFLU_RS23730	0.82	-1.8
5,318,555	+		PFLU_RS23730	0.82	-0.7
5,318,555	+		PFLU_RS23730	0.82	-0.7
5,318,555	+		PFLU_RS23730	0.82	-2.8
5,318,556	-		PFLU_RS23730	0.82	-1.0
5,318,556	-		PFLU_RS23730	0.82	-2.3
5,318,556	-		PFLU_RS23730	0.82	-2.0
5,318,556	-		PFLU_RS23730	0.82	-1.4
5,318,556	-		PFLU_RS23730	0.82	+0.0
5,318,556	-		PFLU_RS23730	0.82	-2.5
5,318,556	-		PFLU_RS23730	0.82	-1.5
5,318,556	-		PFLU_RS23730	0.82	+0.9
5,318,556	-		PFLU_RS23730	0.82	-0.7
5,318,556	-		PFLU_RS23730	0.82	-0.5
5,318,556	-		PFLU_RS23730	0.82	-1.7
5,318,556	-		PFLU_RS23730	0.82	-0.3
5,318,556	-		PFLU_RS23730	0.82	-2.7
5,318,556	-		PFLU_RS23730	0.82	-0.8
5,318,556	-		PFLU_RS23730	0.82	-0.4
5,318,556	-		PFLU_RS23730	0.82	-2.5
5,318,556	-		PFLU_RS23730	0.82	+0.7
5,318,556	-		PFLU_RS23730	0.82	-0.1
5,318,556	-		PFLU_RS23730	0.82	-0.7
5,318,556	-		PFLU_RS23730	0.82	+0.5
5,318,556	-		PFLU_RS23730	0.82	-1.4
5,318,556	-		PFLU_RS23730	0.82	+0.3
5,318,556	-		PFLU_RS23730	0.82	-1.5
5,318,556	-		PFLU_RS23730	0.82	+2.1
5,318,556	-		PFLU_RS23730	0.82	-1.3
5,318,556	-		PFLU_RS23730	0.82	-1.5
5,318,556	-		PFLU_RS23730	0.82	-0.7
5,318,556	-		PFLU_RS23730	0.82	-2.1
5,318,556	-		PFLU_RS23730	0.82	+0.3
5,318,556	-		PFLU_RS23730	0.82	-0.9
5,318,556	-		PFLU_RS23730	0.82	-1.8
5,318,556	-		PFLU_RS23730	0.82	-1.0
5,318,556	-		PFLU_RS23730	0.82	-3.4
5,318,556	-		PFLU_RS23730	0.82	+0.1
5,318,556	-		PFLU_RS23730	0.82	-1.7
5,318,556	-		PFLU_RS23730	0.82	-1.1
5,318,556	-		PFLU_RS23730	0.82	-1.1
5,318,556	-		PFLU_RS23730	0.82	-0.7
5,318,556	-		PFLU_RS23730	0.82	-1.5
5,318,556	-		PFLU_RS23730	0.82	-1.9
5,318,556	-		PFLU_RS23730	0.82	-3.3
5,318,556	-		PFLU_RS23730	0.82	+0.3
5,318,556	-		PFLU_RS23730	0.82	-1.4
5,318,556	-		PFLU_RS23730	0.82	-0.3
5,318,557	+		PFLU_RS23730	0.82	-2.8
5,318,557	+		PFLU_RS23730	0.82	-0.1
5,318,557	+		PFLU_RS23730	0.82	+0.5
5,318,557	+		PFLU_RS23730	0.82	-1.4
5,318,557	+		PFLU_RS23730	0.82	+0.0
5,318,558	-		PFLU_RS23730	0.82	-1.7
5,318,771	+				+0.1
5,318,771	+				+0.4
5,318,772	-				-0.4
5,318,782	+				-3.1
5,318,782	+				-1.4
5,318,783	-				-0.7
5,318,953	-		PFLU_RS23735	0.14	-1.7
5,318,953	-		PFLU_RS23735	0.14	+1.7
5,319,139	+		PFLU_RS23735	0.36	-0.4
5,319,172	-		PFLU_RS23735	0.40	-1.0
5,319,172	-		PFLU_RS23735	0.40	-0.5
5,319,172	-		PFLU_RS23735	0.40	+1.7
5,319,191	+		PFLU_RS23735	0.42	-1.5
5,319,199	+		PFLU_RS23735	0.43	+0.3
5,319,200	-		PFLU_RS23735	0.43	-0.0
5,319,200	-		PFLU_RS23735	0.43	-1.4
5,319,433	+		PFLU_RS23735	0.71	+1.6
5,319,434	-		PFLU_RS23735	0.71	-0.8
5,319,697	+				-2.3
5,319,697	+				+1.8
5,319,697	+				+1.3
5,319,697	+				-1.5
5,319,697	+				-1.2