Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS22115

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
4,974,988	+				-0.3
4,974,988	+				-1.4
4,975,057	+				-2.6
4,975,057	+				-1.0
4,975,057	+				-1.8
4,975,057	+				-1.9
4,975,057	+				-1.7
4,975,057	+				-2.0
4,975,057	+				-1.6
4,975,057	+				-2.3
4,975,057	+				-1.2
4,975,057	+				-2.0
4,975,058	-				-1.6
4,975,058	-				-3.1
4,975,058	-				-1.3
4,975,058	-				-1.6
4,975,058	-				-2.0
4,975,058	-				-2.1
4,975,062	+				+0.6
4,975,080	+				-2.0
4,975,081	-				-0.5
4,975,136	+		PFLU_RS31770	0.28	-1.7
4,975,157	+		PFLU_RS31770	0.51	-2.1
4,975,165	-		PFLU_RS31770	0.59	-0.0
4,975,165	-		PFLU_RS31770	0.59	-1.3
4,975,165	-		PFLU_RS31770	0.59	-0.4
4,975,166	+		PFLU_RS31770	0.60	+0.6
4,975,166	+		PFLU_RS31770	0.60	+0.3
4,975,167	-		PFLU_RS31770	0.61	+1.1
4,975,172	+		PFLU_RS31770	0.67	+2.1
4,975,310	-				+1.6
4,975,636	+		PFLU_RS22110	0.54	+1.9
4,975,636	+		PFLU_RS22110	0.54	-2.5
4,975,636	+		PFLU_RS22110	0.54	+0.1
4,975,636	+		PFLU_RS22110	0.54	-2.9
4,975,636	+		PFLU_RS22110	0.54	+0.0
4,975,636	+		PFLU_RS22110	0.54	-0.9
4,975,636	+		PFLU_RS22110	0.54	-1.5
4,975,636	+		PFLU_RS22110	0.54	+1.4
4,975,637	-		PFLU_RS22110	0.54	-1.4
4,975,637	-		PFLU_RS22110	0.54	+1.1
4,975,637	-		PFLU_RS22110	0.54	+0.0
4,975,637	-		PFLU_RS22110	0.54	+0.9
4,975,637	-		PFLU_RS22110	0.54	-1.7
4,975,637	-		PFLU_RS22110	0.54	+0.0
4,975,637	-		PFLU_RS22110	0.54	+1.1
4,975,637	-		PFLU_RS22110	0.54	+2.0
4,975,637	-		PFLU_RS22110	0.54	-0.9
4,975,637	-		PFLU_RS22110	0.54	-0.7
4,975,637	-		PFLU_RS22110	0.54	+0.5
4,975,637	-		PFLU_RS22110	0.54	-0.7
4,975,637	-		PFLU_RS22110	0.54	-0.6
4,975,637	-		PFLU_RS22110	0.54	-0.2
4,975,637	-		PFLU_RS22110	0.54	+0.1
4,975,637	-		PFLU_RS22110	0.54	-0.1
4,975,704	+		PFLU_RS22110	0.65	+0.4
4,975,705	-		PFLU_RS22110	0.66	-2.7
4,975,705	-		PFLU_RS22110	0.66	+1.3
4,975,737	+		PFLU_RS22110	0.71	-0.2
4,975,737	+		PFLU_RS22110	0.71	+0.6
4,975,737	+		PFLU_RS22110	0.71	-0.6
4,975,738	-		PFLU_RS22110	0.71	+0.5
4,975,782	-		PFLU_RS22110	0.78	-0.7
4,975,782	-		PFLU_RS22110	0.78	+0.4
4,975,918	+				+0.5
4,975,918	+				-1.7
4,975,918	+				-0.7
4,975,919	-				+1.1
4,976,043	+		PFLU_RS22115	0.14	+1.6
4,976,044	-		PFLU_RS22115	0.14	-0.2
4,976,080	+		PFLU_RS22115	0.18	-0.7
4,976,081	-		PFLU_RS22115	0.18	+1.8
4,976,104	+		PFLU_RS22115	0.21	+0.0
4,976,104	+		PFLU_RS22115	0.21	-0.4
4,976,104	+		PFLU_RS22115	0.21	+1.2
4,976,104	+		PFLU_RS22115	0.21	-1.6
4,976,104	+		PFLU_RS22115	0.21	+0.3
4,976,104	+		PFLU_RS22115	0.21	-0.6
4,976,105	-		PFLU_RS22115	0.21	-0.0
4,976,105	-		PFLU_RS22115	0.21	+0.1
4,976,105	-		PFLU_RS22115	0.21	-1.2
4,976,105	-		PFLU_RS22115	0.21	+2.5
4,976,141	+		PFLU_RS22115	0.25	-1.7
4,976,141	+		PFLU_RS22115	0.25	+0.7
4,976,141	+		PFLU_RS22115	0.25	-0.5
4,976,141	+		PFLU_RS22115	0.25	+0.5
4,976,141	+		PFLU_RS22115	0.25	+1.0
4,976,141	+		PFLU_RS22115	0.25	+0.1
4,976,141	+		PFLU_RS22115	0.25	+0.4
4,976,287	+		PFLU_RS22115	0.41	+0.6
4,976,287	+		PFLU_RS22115	0.41	+0.4
4,976,287	+		PFLU_RS22115	0.41	+0.1
4,976,287	+		PFLU_RS22115	0.41	-2.2
4,976,287	+		PFLU_RS22115	0.41	-1.5
4,976,288	-		PFLU_RS22115	0.41	-0.4
4,976,288	-		PFLU_RS22115	0.41	+0.1
4,976,288	-		PFLU_RS22115	0.41	-1.1
4,976,288	-		PFLU_RS22115	0.41	-1.0
4,976,320	+		PFLU_RS22115	0.45	-0.3
4,976,320	+		PFLU_RS22115	0.45	+0.7
4,976,320	+		PFLU_RS22115	0.45	-2.4
4,976,320	+		PFLU_RS22115	0.45	+0.6
4,976,320	+		PFLU_RS22115	0.45	-1.0
4,976,320	+		PFLU_RS22115	0.45	-0.6
4,976,321	-		PFLU_RS22115	0.45	-1.3
4,976,321	-		PFLU_RS22115	0.45	-0.5
4,976,321	-		PFLU_RS22115	0.45	+2.3
4,976,321	-		PFLU_RS22115	0.45	-2.0
4,976,321	-		PFLU_RS22115	0.45	+0.1
4,976,321	-		PFLU_RS22115	0.45	+1.7
4,976,321	-		PFLU_RS22115	0.45	-0.1
4,976,321	-		PFLU_RS22115	0.45	+0.3
4,976,321	-		PFLU_RS22115	0.45	-1.3
4,976,321	-		PFLU_RS22115	0.45	+0.6
4,976,321	-		PFLU_RS22115	0.45	-0.8
4,976,321	-		PFLU_RS22115	0.45	-1.2
4,976,453	-		PFLU_RS22115	0.60	+0.1
4,976,453	-		PFLU_RS22115	0.60	-0.4
4,976,453	-		PFLU_RS22115	0.60	-1.2
4,976,498	+		PFLU_RS22115	0.65	+0.2
4,976,499	-		PFLU_RS22115	0.65	+0.8
4,976,695	+		PFLU_RS22115	0.87	-2.3
4,976,695	+		PFLU_RS22115	0.87	-0.9
4,976,695	+		PFLU_RS22115	0.87	-0.7
4,976,695	+		PFLU_RS22115	0.87	+1.4
4,976,695	+		PFLU_RS22115	0.87	+1.3
4,976,695	+		PFLU_RS22115	0.87	+1.3
4,976,695	+		PFLU_RS22115	0.87	-2.0
4,976,695	+		PFLU_RS22115	0.87	+0.6
4,976,695	+		PFLU_RS22115	0.87	-2.7
4,976,695	+		PFLU_RS22115	0.87	-0.7
4,976,695	+		PFLU_RS22115	0.87	+1.5
4,976,695	+		PFLU_RS22115	0.87	+2.3
4,976,695	+		PFLU_RS22115	0.87	+1.3
4,976,695	+		PFLU_RS22115	0.87	+0.5
4,976,695	+		PFLU_RS22115	0.87	+0.9
4,976,695	+		PFLU_RS22115	0.87	-1.6
4,976,695	+		PFLU_RS22115	0.87	+1.7
4,976,695	+		PFLU_RS22115	0.87	-2.5
4,976,695	+		PFLU_RS22115	0.87	-0.9
4,976,695	+		PFLU_RS22115	0.87	+1.8
4,976,695	+		PFLU_RS22115	0.87	+0.6
4,976,696	-		PFLU_RS22115	0.87	+0.4
4,976,696	-		PFLU_RS22115	0.87	-0.7
4,976,696	-		PFLU_RS22115	0.87	-1.7
4,976,696	-		PFLU_RS22115	0.87	-0.5
4,976,696	-		PFLU_RS22115	0.87	+1.8
4,976,696	-		PFLU_RS22115	0.87	+1.5
4,976,696	-		PFLU_RS22115	0.87	-1.3
4,976,696	-		PFLU_RS22115	0.87	-0.7
4,976,696	-		PFLU_RS22115	0.87	-0.9
4,976,696	-		PFLU_RS22115	0.87	+1.1
4,976,696	-		PFLU_RS22115	0.87	+2.2
4,976,696	-		PFLU_RS22115	0.87	+2.6
4,976,696	-		PFLU_RS22115	0.87	+0.8
4,976,696	-		PFLU_RS22115	0.87	-1.0
4,976,696	-		PFLU_RS22115	0.87	-2.1
4,976,837	-				-0.6
4,976,837	-				-0.2
4,976,843	-				-0.9
4,976,843	-				+0.1
4,976,843	-				+1.0
4,976,970	+				+0.0
4,976,970	+				+0.8
4,976,986	+				-0.2
4,976,986	+				+1.7
4,976,986	+				+2.1
4,976,987	-				-0.3
4,976,991	+				-0.9
4,977,001	+				-0.4
4,977,024	+				+1.8
4,977,028	+				+1.5
4,977,060	+				+1.9
4,977,060	+				+2.1
4,977,060	+				+0.8
4,977,061	-				+1.0
4,977,061	-				+0.3
4,977,061	-				-1.8
4,977,061	-				+0.4
4,977,081	-				+1.0
4,977,083	+				-0.1
4,977,083	+				+2.9
4,977,084	-				+1.1
4,977,084	-				-1.0
4,977,320	+		PFLU_RS22120	0.22	-0.9
4,977,321	-		PFLU_RS22120	0.22	+2.1
4,977,435	-		PFLU_RS22120	0.34	-1.4
4,977,459	+		PFLU_RS22120	0.37	+0.9
4,977,459	+		PFLU_RS22120	0.37	-0.9
4,977,459	+		PFLU_RS22120	0.37	+1.0
4,977,459	+		PFLU_RS22120	0.37	-0.3
4,977,459	+		PFLU_RS22120	0.37	+1.3
4,977,459	+		PFLU_RS22120	0.37	-0.3
4,977,459	+		PFLU_RS22120	0.37	-2.8
4,977,459	+		PFLU_RS22120	0.37	+0.8
4,977,460	-		PFLU_RS22120	0.37	-0.9
4,977,460	-		PFLU_RS22120	0.37	-0.6
4,977,460	-		PFLU_RS22120	0.37	-0.4
4,977,460	-		PFLU_RS22120	0.37	+0.1
4,977,460	-		PFLU_RS22120	0.37	+0.2
4,977,460	-		PFLU_RS22120	0.37	-3.3
4,977,460	-		PFLU_RS22120	0.37	+1.1
4,977,460	-		PFLU_RS22120	0.37	-0.3
4,977,460	-		PFLU_RS22120	0.37	-1.0
4,977,460	-		PFLU_RS22120	0.37	-1.6
4,977,460	-		PFLU_RS22120	0.37	-0.2
4,977,580	+		PFLU_RS22120	0.49	+0.3
4,977,580	+		PFLU_RS22120	0.49	+0.8
4,977,580	+		PFLU_RS22120	0.49	+1.3
4,977,580	+		PFLU_RS22120	0.49	+0.1
4,977,580	+		PFLU_RS22120	0.49	+1.5
4,977,580	+		PFLU_RS22120	0.49	-2.8
4,977,580	+		PFLU_RS22120	0.49	+0.9
4,977,580	+		PFLU_RS22120	0.49	+1.0
4,977,580	+		PFLU_RS22120	0.49	+1.1
4,977,580	+		PFLU_RS22120	0.49	-1.0
4,977,580	+		PFLU_RS22120	0.49	-0.0
4,977,580	+		PFLU_RS22120	0.49	+1.1
4,977,580	+		PFLU_RS22120	0.49	-1.3
4,977,581	-		PFLU_RS22120	0.50	+1.3
4,977,581	-		PFLU_RS22120	0.50	+1.3
4,977,581	-		PFLU_RS22120	0.50	+1.7
4,977,581	-		PFLU_RS22120	0.50	-2.3
4,977,581	-		PFLU_RS22120	0.50	-0.7
4,977,581	-		PFLU_RS22120	0.50	-1.4
4,977,581	-		PFLU_RS22120	0.50	-2.3
4,977,581	-		PFLU_RS22120	0.50	-0.0
4,977,581	-		PFLU_RS22120	0.50	+1.7
4,977,581	-		PFLU_RS22120	0.50	+0.7
4,977,581	-		PFLU_RS22120	0.50	+0.7
4,977,581	-		PFLU_RS22120	0.50	-0.8
4,977,581	-		PFLU_RS22120	0.50	+3.1
4,977,581	-		PFLU_RS22120	0.50	+1.8
4,977,581	-		PFLU_RS22120	0.50	+1.0
4,977,581	-		PFLU_RS22120	0.50	+0.8
4,977,581	-		PFLU_RS22120	0.50	+0.2
4,977,581	-		PFLU_RS22120	0.50	-2.0
4,977,581	-		PFLU_RS22120	0.50	+0.9
4,977,581	-		PFLU_RS22120	0.50	-1.4
4,977,581	-		PFLU_RS22120	0.50	-2.0
4,977,581	-		PFLU_RS22120	0.50	+0.3
4,977,686	+		PFLU_RS22120	0.61	-1.8
4,977,686	+		PFLU_RS22120	0.61	+4.9
4,977,687	-		PFLU_RS22120	0.61	-0.3
4,977,687	-		PFLU_RS22120	0.61	-0.7
4,977,687	-		PFLU_RS22120	0.61	-0.1
4,977,687	-		PFLU_RS22120	0.61	+1.9