Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS09980

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,202,389	+		PFLU_RS09975	0.56	-2.4
2,202,466	+		PFLU_RS09975	0.60	-0.2
2,202,466	+		PFLU_RS09975	0.60	-0.9
2,202,646	+		PFLU_RS09975	0.71	-0.2
2,202,647	-		PFLU_RS09975	0.71	+1.0
2,202,647	-		PFLU_RS09975	0.71	+1.9
2,202,824	-		PFLU_RS09975	0.81	+1.3
2,202,824	-		PFLU_RS09975	0.81	-2.1
2,202,824	-		PFLU_RS09975	0.81	-0.2
2,202,957	+		PFLU_RS09975	0.88	+2.1
2,202,957	+		PFLU_RS09975	0.88	+0.1
2,202,957	+		PFLU_RS09975	0.88	+0.4
2,202,958	-		PFLU_RS09975	0.88	-1.1
2,202,958	-		PFLU_RS09975	0.88	+1.5
2,202,958	-		PFLU_RS09975	0.88	+2.8
2,202,958	-		PFLU_RS09975	0.88	+1.7
2,203,057	+				+1.4
2,203,130	+				-1.4
2,203,130	+				+0.5
2,203,240	+				-1.2
2,203,240	+				-2.2
2,203,240	+				-2.1
2,203,240	+				-2.0
2,203,240	+				-2.8
2,203,241	-				-2.0
2,203,241	-				+0.6
2,203,241	-				+0.0
2,203,241	-				-3.5
2,203,241	-				-0.1
2,203,241	-				-1.3
2,203,241	-				-0.7
2,203,241	-				+0.6
2,203,242	+				+0.5
2,203,242	+				-1.1
2,203,243	-				+3.1
2,203,243	-				+0.9
2,203,243	-				+0.2
2,203,243	-				-2.1
2,203,243	-				-1.7
2,203,243	-				+1.2
2,203,271	+				-2.4
2,203,272	-				+1.8
2,203,352	+				-3.7
2,203,352	+				-1.6
2,203,352	+				-2.2
2,203,352	+				-3.2
2,203,353	-				-1.6
2,203,353	-				-1.7
2,203,353	-				-3.2
2,203,768	+		PFLU_RS09980	0.23	-1.8
2,203,769	-		PFLU_RS09980	0.23	-0.1
2,203,911	-		PFLU_RS09980	0.30	-2.4
2,203,911	-		PFLU_RS09980	0.30	-0.1
2,203,988	+		PFLU_RS09980	0.33	-1.6
2,203,988	+		PFLU_RS09980	0.33	-3.2
2,203,988	+		PFLU_RS09980	0.33	-2.1
2,203,988	+		PFLU_RS09980	0.33	-2.4
2,203,988	+		PFLU_RS09980	0.33	-1.6
2,203,988	+		PFLU_RS09980	0.33	-1.2
2,203,989	-		PFLU_RS09980	0.33	-3.3
2,203,989	-		PFLU_RS09980	0.33	-3.4
2,203,989	-		PFLU_RS09980	0.33	-2.7
2,203,989	-		PFLU_RS09980	0.33	-2.6
2,204,045	-		PFLU_RS09980	0.36	-3.2
2,204,122	-		PFLU_RS09980	0.40	-4.3
2,204,181	+		PFLU_RS09980	0.42	-2.3
2,204,204	+		PFLU_RS09980	0.43	-1.6
2,204,204	+		PFLU_RS09980	0.43	-0.7
2,204,205	-		PFLU_RS09980	0.43	-3.4
2,204,243	+		PFLU_RS09980	0.45	-2.3
2,204,243	+		PFLU_RS09980	0.45	-1.6
2,204,244	-		PFLU_RS09980	0.45	-2.0
2,204,244	-		PFLU_RS09980	0.45	-2.7
2,204,244	-		PFLU_RS09980	0.45	-3.3
2,204,276	+		PFLU_RS09980	0.47	-2.7
2,204,276	+		PFLU_RS09980	0.47	-2.4
2,204,276	+		PFLU_RS09980	0.47	-3.3
2,204,277	-		PFLU_RS09980	0.47	+0.5
2,204,277	-		PFLU_RS09980	0.47	-2.7
2,204,277	-		PFLU_RS09980	0.47	+0.4
2,204,640	+		PFLU_RS09980	0.64	-2.1
2,204,641	-		PFLU_RS09980	0.64	-1.9
2,204,641	-		PFLU_RS09980	0.64	-3.0
2,204,641	-		PFLU_RS09980	0.64	-2.0
2,204,641	-		PFLU_RS09980	0.64	-1.1
2,204,678	+		PFLU_RS09980	0.66	-2.4
2,204,678	+		PFLU_RS09980	0.66	-0.7
2,204,678	+		PFLU_RS09980	0.66	-3.4
2,204,678	+		PFLU_RS09980	0.66	-3.6
2,204,678	+		PFLU_RS09980	0.66	-2.9
2,204,679	-		PFLU_RS09980	0.66	-4.5
2,204,679	-		PFLU_RS09980	0.66	-1.2
2,204,679	-		PFLU_RS09980	0.66	-3.7
2,204,679	-		PFLU_RS09980	0.66	-3.9
2,204,679	-		PFLU_RS09980	0.66	-3.2
2,204,720	+		PFLU_RS09980	0.68	-2.2
2,204,720	+		PFLU_RS09980	0.68	-1.9
2,204,720	+		PFLU_RS09980	0.68	-2.7
2,204,720	+		PFLU_RS09980	0.68	-3.9
2,204,720	+		PFLU_RS09980	0.68	-1.5
2,204,720	+		PFLU_RS09980	0.68	-2.8
2,204,720	+		PFLU_RS09980	0.68	-2.2
2,204,721	-		PFLU_RS09980	0.68	-3.6
2,204,721	-		PFLU_RS09980	0.68	-3.9
2,204,721	-		PFLU_RS09980	0.68	-1.9
2,204,721	-		PFLU_RS09980	0.68	-0.4
2,204,721	-		PFLU_RS09980	0.68	-2.0
2,204,721	-		PFLU_RS09980	0.68	-2.3
2,204,721	-		PFLU_RS09980	0.68	-0.9
2,204,721	-		PFLU_RS09980	0.68	-1.7
2,204,733	+		PFLU_RS09980	0.68	-1.4
2,204,733	+		PFLU_RS09980	0.68	-3.6
2,204,734	-		PFLU_RS09980	0.69	-2.5
2,204,734	-		PFLU_RS09980	0.69	-0.1
2,204,775	+		PFLU_RS09980	0.70	-3.6
2,204,776	-		PFLU_RS09980	0.70	-3.2
2,204,776	-		PFLU_RS09980	0.70	-1.8
2,204,777	+		PFLU_RS09980	0.71	-2.6
2,204,778	-		PFLU_RS09980	0.71	-2.8
2,204,778	-		PFLU_RS09980	0.71	-1.9
2,205,015	-		PFLU_RS09980	0.82	-2.9
2,205,023	+		PFLU_RS09980	0.82	-0.3
2,205,023	+		PFLU_RS09980	0.82	-0.4
2,205,023	+		PFLU_RS09980	0.82	-0.9
2,205,024	-		PFLU_RS09980	0.82	-3.0
2,205,024	-		PFLU_RS09980	0.82	-4.2
2,205,024	-		PFLU_RS09980	0.82	-0.3
2,205,119	+		PFLU_RS09980	0.87	-3.0
2,205,119	+		PFLU_RS09980	0.87	-3.2
2,205,119	+		PFLU_RS09980	0.87	-2.2
2,205,119	+		PFLU_RS09980	0.87	-2.9
2,205,120	-		PFLU_RS09980	0.87	-1.6
2,205,120	-		PFLU_RS09980	0.87	-2.5
2,205,149	+		PFLU_RS09980	0.88	-3.2
2,205,149	+		PFLU_RS09980	0.88	-3.4
2,205,149	+		PFLU_RS09980	0.88	-3.1
2,205,149	+		PFLU_RS09980	0.88	-2.9
2,205,149	+		PFLU_RS09980	0.88	-2.7
2,205,149	+		PFLU_RS09980	0.88	-1.0
2,205,149	+		PFLU_RS09980	0.88	-3.0
2,205,149	+		PFLU_RS09980	0.88	-3.5
2,205,150	-		PFLU_RS09980	0.88	-1.5
2,205,158	+		PFLU_RS09980	0.89	-3.5
2,205,158	+		PFLU_RS09980	0.89	-2.2
2,205,158	+		PFLU_RS09980	0.89	-1.6
2,205,158	+		PFLU_RS09980	0.89	-2.0
2,205,158	+		PFLU_RS09980	0.89	-1.1
2,205,158	+		PFLU_RS09980	0.89	-2.9
2,205,158	+		PFLU_RS09980	0.89	-2.7
2,205,158	+		PFLU_RS09980	0.89	-3.4
2,205,159	-		PFLU_RS09980	0.89	-3.2
2,205,159	-		PFLU_RS09980	0.89	-3.7
2,205,159	-		PFLU_RS09980	0.89	-3.1
2,205,159	-		PFLU_RS09980	0.89	-4.7
2,205,159	-		PFLU_RS09980	0.89	-1.6
2,205,159	-		PFLU_RS09980	0.89	-2.1
2,205,159	-		PFLU_RS09980	0.89	-0.9
2,205,159	-		PFLU_RS09980	0.89	-2.0
2,205,200	+				-1.7
2,205,200	+				-3.3
2,205,200	+				-0.9
2,205,200	+				-2.6
2,205,201	-				-4.0
2,205,294	+				-1.8
2,205,294	+				-0.9
2,205,294	+				-2.2
2,205,294	+				-3.4
2,205,294	+				-2.7
2,205,294	+				-2.2
2,205,294	+				-2.4
2,205,294	+				-1.7
2,205,295	-				-2.5
2,205,399	+				-1.4
2,205,399	+				-2.9
2,205,399	+				-2.8
2,205,399	+				-3.9
2,205,400	-				-1.4
2,205,400	-				+0.4
2,205,400	-				-1.4
2,205,402	+				-3.0
2,205,402	+				-2.3
2,205,402	+				-3.7
2,205,402	+				-0.4
2,205,403	-				+1.2
2,205,403	-				-1.6
2,205,403	-				-0.9
2,205,403	-				-2.3
2,205,471	+				-3.1
2,205,493	+				-1.6
2,205,562	-				+1.9
2,205,562	-				+1.8
2,205,572	+				+0.8
2,205,572	+				+1.2
2,205,573	-				+0.9
2,205,623	+		PFLU_RS09985	0.12	+0.0
2,205,623	+		PFLU_RS09985	0.12	+2.2
2,205,623	+		PFLU_RS09985	0.12	+0.0
2,205,623	+		PFLU_RS09985	0.12	+1.6
2,205,624	-		PFLU_RS09985	0.12	+0.1
2,205,624	-		PFLU_RS09985	0.12	+0.1
2,205,624	-		PFLU_RS09985	0.12	+1.2
2,205,624	-		PFLU_RS09985	0.12	+2.5
2,205,624	-		PFLU_RS09985	0.12	-0.0
2,205,624	-		PFLU_RS09985	0.12	+1.5
2,205,624	-		PFLU_RS09985	0.12	-0.6
2,205,626	+		PFLU_RS09985	0.13	-0.4
2,205,626	+		PFLU_RS09985	0.13	+0.7
2,205,626	+		PFLU_RS09985	0.13	+1.0
2,205,626	+		PFLU_RS09985	0.13	-0.9
2,205,626	+		PFLU_RS09985	0.13	+1.4
2,205,626	+		PFLU_RS09985	0.13	+0.2
2,205,626	+		PFLU_RS09985	0.13	+1.1
2,205,627	-		PFLU_RS09985	0.13	-1.4
2,205,627	-		PFLU_RS09985	0.13	-1.0
2,205,643	+		PFLU_RS09985	0.14	-2.7
2,205,803	+		PFLU_RS09985	0.31	+1.1
2,205,803	+		PFLU_RS09985	0.31	+1.8
2,205,803	+		PFLU_RS09985	0.31	+1.2
2,205,803	+		PFLU_RS09985	0.31	-2.7
2,205,804	-		PFLU_RS09985	0.31	-1.1
2,205,804	-		PFLU_RS09985	0.31	+1.2
2,205,804	-		PFLU_RS09985	0.31	-1.4
2,205,804	-		PFLU_RS09985	0.31	+1.1
2,205,859	+		PFLU_RS09985	0.37	-0.4
2,205,859	+		PFLU_RS09985	0.37	-0.1
2,205,860	-		PFLU_RS09985	0.37	-2.2
2,205,860	-		PFLU_RS09985	0.37	+2.5
2,206,024	+		PFLU_RS09985	0.54	+0.4
2,206,024	+		PFLU_RS09985	0.54	-1.9
2,206,025	-		PFLU_RS09985	0.54	-0.9
2,206,025	-		PFLU_RS09985	0.54	+0.3
2,206,025	-		PFLU_RS09985	0.54	-0.4
2,206,025	-		PFLU_RS09985	0.54	-1.1
2,206,132	+		PFLU_RS09985	0.65	+0.9
2,206,132	+		PFLU_RS09985	0.65	+0.6
2,206,132	+		PFLU_RS09985	0.65	+0.2
2,206,132	+		PFLU_RS09985	0.65	-0.7
2,206,132	+		PFLU_RS09985	0.65	+1.2
2,206,132	+		PFLU_RS09985	0.65	+0.7
2,206,132	+		PFLU_RS09985	0.65	+1.8
2,206,132	+		PFLU_RS09985	0.65	+0.5
2,206,133	-		PFLU_RS09985	0.65	-0.6
2,206,133	-		PFLU_RS09985	0.65	+0.3
2,206,133	-		PFLU_RS09985	0.65	-1.6