Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS09050

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,005,780	-				-0.4
2,005,921	+		PFLU_RS09045	0.21	-0.3
2,005,921	+		PFLU_RS09045	0.21	-1.5
2,005,921	+		PFLU_RS09045	0.21	+0.3
2,005,921	+		PFLU_RS09045	0.21	+0.7
2,005,922	-		PFLU_RS09045	0.21	-0.8
2,005,922	-		PFLU_RS09045	0.21	-0.9
2,005,922	-		PFLU_RS09045	0.21	+1.9
2,005,922	-		PFLU_RS09045	0.21	+2.1
2,005,922	-		PFLU_RS09045	0.21	+1.4
2,005,922	-		PFLU_RS09045	0.21	+2.2
2,005,947	+		PFLU_RS09045	0.24	+0.5
2,005,948	-		PFLU_RS09045	0.24	+0.2
2,005,990	+		PFLU_RS09045	0.28	+2.8
2,005,990	+		PFLU_RS09045	0.28	-0.5
2,005,991	-		PFLU_RS09045	0.28	-0.8
2,005,991	-		PFLU_RS09045	0.28	+0.7
2,005,991	-		PFLU_RS09045	0.28	+0.8
2,006,029	+		PFLU_RS09045	0.32	+1.0
2,006,029	+		PFLU_RS09045	0.32	-0.0
2,006,029	+		PFLU_RS09045	0.32	+0.1
2,006,029	+		PFLU_RS09045	0.32	-0.1
2,006,029	+		PFLU_RS09045	0.32	-0.2
2,006,029	+		PFLU_RS09045	0.32	-2.2
2,006,029	+		PFLU_RS09045	0.32	-0.7
2,006,029	+		PFLU_RS09045	0.32	-1.0
2,006,030	-		PFLU_RS09045	0.32	+0.3
2,006,030	-		PFLU_RS09045	0.32	+0.6
2,006,030	-		PFLU_RS09045	0.32	-1.0
2,006,030	-		PFLU_RS09045	0.32	-1.9
2,006,030	-		PFLU_RS09045	0.32	+2.2
2,006,030	-		PFLU_RS09045	0.32	+2.8
2,006,030	-		PFLU_RS09045	0.32	+1.9
2,006,030	-		PFLU_RS09045	0.32	+0.4
2,006,194	+		PFLU_RS09045	0.50	-2.3
2,006,194	+		PFLU_RS09045	0.50	-3.0
2,006,194	+		PFLU_RS09045	0.50	-0.4
2,006,194	+		PFLU_RS09045	0.50	-0.3
2,006,194	+		PFLU_RS09045	0.50	+1.1
2,006,194	+		PFLU_RS09045	0.50	-0.4
2,006,194	+		PFLU_RS09045	0.50	-0.9
2,006,195	-		PFLU_RS09045	0.50	+2.5
2,006,195	-		PFLU_RS09045	0.50	-1.5
2,006,195	-		PFLU_RS09045	0.50	+1.2
2,006,195	-		PFLU_RS09045	0.50	-2.4
2,006,277	+		PFLU_RS09045	0.59	-0.8
2,006,277	+		PFLU_RS09045	0.59	+1.6
2,006,277	+		PFLU_RS09045	0.59	+0.9
2,006,278	-		PFLU_RS09045	0.59	-1.7
2,006,278	-		PFLU_RS09045	0.59	-1.0
2,006,343	+		PFLU_RS09045	0.66	+0.2
2,006,580	+				+0.4
2,006,624	+				+2.1
2,006,624	+				-1.9
2,006,624	+				+2.3
2,006,625	-				+2.8
2,006,625	-				+0.3
2,006,625	-				-0.8
2,006,625	-				-1.8
2,006,625	-				-0.1
2,006,628	+				-0.4
2,006,628	+				+0.9
2,006,628	+				-0.2
2,006,628	+				+0.8
2,006,628	+				+0.4
2,006,628	+				-1.8
2,006,628	+				-0.2
2,006,628	+				-2.2
2,006,628	+				+0.1
2,006,629	-				-1.0
2,006,629	-				+1.3
2,006,629	-				-1.4
2,006,629	-				+0.4
2,006,629	-				-1.1
2,006,629	-				+0.7
2,006,629	-				+0.2
2,006,629	-				-0.5
2,006,629	-				-0.1
2,006,629	-				-1.3
2,006,629	-				+0.6
2,006,629	-				-0.5
2,006,629	-				+1.4
2,006,629	-				+1.3
2,006,629	-				+0.4
2,006,668	+				+0.6
2,006,669	-				-1.5
2,006,684	+				-1.8
2,006,684	+				+0.7
2,006,684	+				-0.7
2,006,684	+				-3.4
2,006,685	-				+2.2
2,006,685	-				-0.3
2,006,685	-				+0.5
2,006,685	-				+0.7
2,006,685	-				+2.2
2,006,685	-				+0.9
2,006,705	+				+0.6
2,006,705	+				-0.2
2,006,705	+				-0.5
2,006,705	+				-0.2
2,006,705	+				-2.7
2,006,705	+				-1.1
2,006,706	-				-0.7
2,006,706	-				+0.2
2,006,706	-				-0.5
2,006,706	-				+0.2
2,006,706	-				+1.0
2,006,706	-				-1.6
2,006,706	-				-1.2
2,006,706	-				-0.8
2,006,706	-				-0.4
2,006,706	-				-3.1
2,006,706	-				+0.9
2,006,706	-				+1.2
2,006,706	-				-2.3
2,006,706	-				-0.0
2,006,706	-				-1.0
2,006,706	-				+2.3
2,006,706	-				+0.2
2,006,706	-				-0.2
2,006,706	-				-0.3
2,006,706	-				+0.3
2,006,706	-				+0.6
2,006,706	-				-1.3
2,006,724	+				-1.0
2,006,724	+				-0.2
2,006,724	+				-2.1
2,006,724	+				+0.2
2,006,724	+				+0.8
2,006,725	-				+0.8
2,006,725	-				-0.2
2,006,855	+				-0.2
2,006,855	+				-0.3
2,006,856	-				+0.6
2,006,858	+				-0.7
2,006,858	+				-0.1
2,006,858	+				-0.6
2,006,858	+				+1.4
2,006,858	+				-2.4
2,006,858	+				+0.1
2,006,859	-				-0.1
2,006,859	-				-0.6
2,006,859	-				+0.6
2,006,859	-				+0.8
2,006,859	-				-0.1
2,006,859	-				+0.6
2,006,859	-				-0.4
2,006,859	-				-0.0
2,006,859	-				+0.6
2,006,919	+		PFLU_RS09050	0.12	-1.5
2,006,919	+		PFLU_RS09050	0.12	+0.6
2,006,919	+		PFLU_RS09050	0.12	-1.1
2,006,919	+		PFLU_RS09050	0.12	-0.9
2,006,919	+		PFLU_RS09050	0.12	+0.2
2,006,920	-		PFLU_RS09050	0.13	+0.5
2,006,920	-		PFLU_RS09050	0.13	-1.7
2,006,920	-		PFLU_RS09050	0.13	+1.8
2,006,920	-		PFLU_RS09050	0.13	+0.6
2,006,920	-		PFLU_RS09050	0.13	-0.9
2,006,955	+		PFLU_RS09050	0.14	+0.2
2,006,969	+		PFLU_RS09050	0.15	+1.2
2,006,969	+		PFLU_RS09050	0.15	-0.8
2,006,969	+		PFLU_RS09050	0.15	+1.3
2,006,969	+		PFLU_RS09050	0.15	-3.1
2,006,969	+		PFLU_RS09050	0.15	+0.5
2,006,969	+		PFLU_RS09050	0.15	+1.9
2,006,969	+		PFLU_RS09050	0.15	-1.8
2,006,969	+		PFLU_RS09050	0.15	+0.1
2,006,969	+		PFLU_RS09050	0.15	+0.5
2,006,969	+		PFLU_RS09050	0.15	-0.8
2,006,969	+		PFLU_RS09050	0.15	+0.7
2,006,970	-		PFLU_RS09050	0.15	+1.0
2,006,970	-		PFLU_RS09050	0.15	-1.3
2,006,970	-		PFLU_RS09050	0.15	-0.4
2,006,970	-		PFLU_RS09050	0.15	+0.9
2,006,970	-		PFLU_RS09050	0.15	-0.3
2,006,975	+		PFLU_RS09050	0.15	+0.1
2,006,975	+		PFLU_RS09050	0.15	+1.2
2,006,975	+		PFLU_RS09050	0.15	+1.6
2,006,975	+		PFLU_RS09050	0.15	+1.1
2,006,975	+		PFLU_RS09050	0.15	-0.2
2,006,975	+		PFLU_RS09050	0.15	+2.6
2,006,975	+		PFLU_RS09050	0.15	+0.0
2,006,975	+		PFLU_RS09050	0.15	-1.9
2,006,975	+		PFLU_RS09050	0.15	-0.0
2,006,975	+		PFLU_RS09050	0.15	+0.1
2,006,975	+		PFLU_RS09050	0.15	-0.1
2,006,975	+		PFLU_RS09050	0.15	-0.8
2,006,975	+		PFLU_RS09050	0.15	-0.8
2,006,975	+		PFLU_RS09050	0.15	+0.1
2,006,975	+		PFLU_RS09050	0.15	-1.4
2,006,975	+		PFLU_RS09050	0.15	-1.5
2,006,975	+		PFLU_RS09050	0.15	-1.3
2,006,975	+		PFLU_RS09050	0.15	-0.4
2,006,975	+		PFLU_RS09050	0.15	-0.9
2,006,975	+		PFLU_RS09050	0.15	+1.1
2,006,975	+		PFLU_RS09050	0.15	+0.2
2,006,975	+		PFLU_RS09050	0.15	+0.2
2,006,975	+		PFLU_RS09050	0.15	-0.3
2,006,975	+		PFLU_RS09050	0.15	-0.8
2,006,975	+		PFLU_RS09050	0.15	+0.9
2,006,975	+		PFLU_RS09050	0.15	+0.8
2,006,975	+		PFLU_RS09050	0.15	+0.3
2,006,975	+		PFLU_RS09050	0.15	-2.6
2,006,976	-		PFLU_RS09050	0.15	+0.3
2,006,976	-		PFLU_RS09050	0.15	-0.6
2,006,976	-		PFLU_RS09050	0.15	+0.4
2,006,976	-		PFLU_RS09050	0.15	-0.2
2,006,976	-		PFLU_RS09050	0.15	-0.8
2,006,976	-		PFLU_RS09050	0.15	+1.0
2,006,976	-		PFLU_RS09050	0.15	-0.2
2,006,976	-		PFLU_RS09050	0.15	+0.3
2,006,976	-		PFLU_RS09050	0.15	-0.1
2,006,976	-		PFLU_RS09050	0.15	-1.3
2,006,976	-		PFLU_RS09050	0.15	+1.3
2,006,976	-		PFLU_RS09050	0.15	+1.4
2,006,976	-		PFLU_RS09050	0.15	+0.7
2,006,976	-		PFLU_RS09050	0.15	-0.0
2,006,976	-		PFLU_RS09050	0.15	+0.9
2,006,976	-		PFLU_RS09050	0.15	+1.3
2,006,976	-		PFLU_RS09050	0.15	+0.3
2,006,976	-		PFLU_RS09050	0.15	+1.1
2,006,976	-		PFLU_RS09050	0.15	-1.5
2,006,976	-		PFLU_RS09050	0.15	-0.4
2,006,976	-		PFLU_RS09050	0.15	-1.2
2,007,068	+		PFLU_RS09050	0.20	+0.9
2,007,068	+		PFLU_RS09050	0.20	-0.0
2,007,068	+		PFLU_RS09050	0.20	+0.2
2,007,068	+		PFLU_RS09050	0.20	-2.6
2,007,068	+		PFLU_RS09050	0.20	-0.2
2,007,069	-		PFLU_RS09050	0.20	+0.4
2,007,069	-		PFLU_RS09050	0.20	-0.7
2,007,069	-		PFLU_RS09050	0.20	+1.5
2,007,069	-		PFLU_RS09050	0.20	-0.9
2,007,069	-		PFLU_RS09050	0.20	+1.4
2,007,069	-		PFLU_RS09050	0.20	+0.7
2,007,069	-		PFLU_RS09050	0.20	+1.5
2,007,069	-		PFLU_RS09050	0.20	+0.2
2,007,069	-		PFLU_RS09050	0.20	+0.9
2,007,075	+		PFLU_RS09050	0.20	+1.2
2,007,116	+		PFLU_RS09050	0.22	-0.6
2,007,167	+		PFLU_RS09050	0.24	-0.6
2,007,167	+		PFLU_RS09050	0.24	-1.0
2,007,167	+		PFLU_RS09050	0.24	-1.8
2,007,167	+		PFLU_RS09050	0.24	-1.4
2,007,168	-		PFLU_RS09050	0.24	+0.7
2,007,168	-		PFLU_RS09050	0.24	+0.4
2,007,168	-		PFLU_RS09050	0.24	+1.2
2,007,168	-		PFLU_RS09050	0.24	-1.3
2,007,168	-		PFLU_RS09050	0.24	+1.2
2,007,226	+		PFLU_RS09050	0.27	+0.2
2,007,233	+		PFLU_RS09050	0.28	-0.5
2,007,233	+		PFLU_RS09050	0.28	-0.3
2,007,233	+		PFLU_RS09050	0.28	+0.4
2,007,233	+		PFLU_RS09050	0.28	-1.6
2,007,234	-		PFLU_RS09050	0.28	+0.5
2,007,234	-		PFLU_RS09050	0.28	-0.7
2,007,234	-		PFLU_RS09050	0.28	-1.4
2,007,234	-		PFLU_RS09050	0.28	+0.8
2,007,254	+		PFLU_RS09050	0.29	-1.7
2,007,255	-		PFLU_RS09050	0.29	-2.8
2,007,285	-		PFLU_RS09050	0.30	-0.5
2,007,285	-		PFLU_RS09050	0.30	-2.6
2,007,338	+		PFLU_RS09050	0.33	-0.4
2,007,338	+		PFLU_RS09050	0.33	-3.2
2,007,339	-		PFLU_RS09050	0.33	+0.1
2,007,374	+		PFLU_RS09050	0.34	-3.0
2,007,374	+		PFLU_RS09050	0.34	-2.0
2,007,374	+		PFLU_RS09050	0.34	-1.2
2,007,374	+		PFLU_RS09050	0.34	+1.0
2,007,375	-		PFLU_RS09050	0.34	+1.8
2,007,375	-		PFLU_RS09050	0.34	+0.5
2,007,375	-		PFLU_RS09050	0.34	+1.4
2,007,375	-		PFLU_RS09050	0.34	-3.0
2,007,375	-		PFLU_RS09050	0.34	-0.2
2,007,428	+		PFLU_RS09050	0.37	+1.3
2,007,428	+		PFLU_RS09050	0.37	-1.6
2,007,428	+		PFLU_RS09050	0.37	-3.5
2,007,428	+		PFLU_RS09050	0.37	-1.1
2,007,428	+		PFLU_RS09050	0.37	+0.6
2,007,429	-		PFLU_RS09050	0.37	-0.9
2,007,429	-		PFLU_RS09050	0.37	+0.3
2,007,429	-		PFLU_RS09050	0.37	+1.1
2,007,429	-		PFLU_RS09050	0.37	+0.1
2,007,429	-		PFLU_RS09050	0.37	+1.2
2,007,429	-		PFLU_RS09050	0.37	+1.2
2,007,429	-		PFLU_RS09050	0.37	-1.0
2,007,429	-		PFLU_RS09050	0.37	-1.2
2,007,429	-		PFLU_RS09050	0.37	+0.6
2,007,429	-		PFLU_RS09050	0.37	-0.6
2,007,429	-		PFLU_RS09050	0.37	-2.3
2,007,429	-		PFLU_RS09050	0.37	+0.3
2,007,524	+		PFLU_RS09050	0.42	-1.6
2,007,524	+		PFLU_RS09050	0.42	-0.5
2,007,524	+		PFLU_RS09050	0.42	-2.4
2,007,524	+		PFLU_RS09050	0.42	-1.9
2,007,524	+		PFLU_RS09050	0.42	+0.1
2,007,524	+		PFLU_RS09050	0.42	-2.2
2,007,525	-		PFLU_RS09050	0.42	+1.9
2,007,525	-		PFLU_RS09050	0.42	-2.5
2,007,525	-		PFLU_RS09050	0.42	+0.6
2,007,525	-		PFLU_RS09050	0.42	-1.0
2,007,525	-		PFLU_RS09050	0.42	+0.8
2,007,525	-		PFLU_RS09050	0.42	-3.2
2,007,548	+		PFLU_RS09050	0.43	-1.9
2,007,554	+		PFLU_RS09050	0.43	+1.1
2,007,555	-		PFLU_RS09050	0.43	+1.2
2,007,555	-		PFLU_RS09050	0.43	-1.2
2,007,555	-		PFLU_RS09050	0.43	+0.9
2,007,555	-		PFLU_RS09050	0.43	+0.0
2,007,555	-		PFLU_RS09050	0.43	+1.2
2,007,555	-		PFLU_RS09050	0.43	-0.2
2,007,555	-		PFLU_RS09050	0.43	+0.8
2,007,555	-		PFLU_RS09050	0.43	-0.2
2,007,694	+		PFLU_RS09050	0.50	-1.2
2,007,695	-		PFLU_RS09050	0.50	-1.7
2,007,695	-		PFLU_RS09050	0.50	+0.8
2,007,695	-		PFLU_RS09050	0.50	+1.2
2,007,695	-		PFLU_RS09050	0.50	+1.8
2,007,752	+		PFLU_RS09050	0.52	-2.9
2,007,752	+		PFLU_RS09050	0.52	+1.1
2,007,752	+		PFLU_RS09050	0.52	-0.3
2,007,752	+		PFLU_RS09050	0.52	-1.8
2,007,752	+		PFLU_RS09050	0.52	-0.7
2,007,752	+		PFLU_RS09050	0.52	+0.3
2,007,753	-		PFLU_RS09050	0.53	-3.3
2,007,753	-		PFLU_RS09050	0.53	+0.5
2,007,753	-		PFLU_RS09050	0.53	+0.5
2,007,753	-		PFLU_RS09050	0.53	-1.0
2,007,753	-		PFLU_RS09050	0.53	-1.9
2,007,753	-		PFLU_RS09050	0.53	-0.2
2,007,753	-		PFLU_RS09050	0.53	+0.3
2,007,753	-		PFLU_RS09050	0.53	-1.6
2,007,753	-		PFLU_RS09050	0.53	+0.7
2,007,753	-		PFLU_RS09050	0.53	-1.4
2,007,753	-		PFLU_RS09050	0.53	+1.4
2,007,753	-		PFLU_RS09050	0.53	-0.6
2,007,762	+		PFLU_RS09050	0.53	-2.9
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2,008,341	-		PFLU_RS09050	0.81	-3.1
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