Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07215

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,607,988	+		PFLU_RS07200	0.56	-0.4
1,607,988	+		PFLU_RS07200	0.56	-1.2
1,608,121	+		PFLU_RS07200	0.73	-0.3
1,608,121	+		PFLU_RS07200	0.73	+0.8
1,608,122	-		PFLU_RS07200	0.73	+2.3
1,608,122	-		PFLU_RS07200	0.73	-0.8
1,608,122	-		PFLU_RS07200	0.73	-1.0
1,608,254	+				+1.2
1,608,254	+				-2.2
1,608,254	+				-2.4
1,608,255	-				-0.4
1,608,255	-				+0.2
1,608,255	-				-1.2
1,608,255	-				+2.5
1,608,255	-				+1.5
1,608,267	+				+1.4
1,608,267	+				+1.9
1,608,267	+				-0.2
1,608,267	+				+0.1
1,608,267	+				+0.4
1,608,267	+				-0.1
1,608,268	-				+3.8
1,608,268	-				+0.2
1,608,362	+				-2.2
1,608,362	+				+2.6
1,608,362	+				+0.6
1,608,362	+				+1.3
1,608,362	+				+0.0
1,608,362	+				-0.4
1,608,362	+				+0.3
1,608,362	+				+0.2
1,608,363	-				+1.8
1,608,363	-				+0.3
1,608,363	-				-0.0
1,608,363	-				-1.8
1,608,363	-				-2.9
1,608,363	-				+1.2
1,608,363	-				+0.8
1,608,363	-				+0.2
1,608,363	-				-0.3
1,608,432	+				-0.1
1,608,442	+				-0.1
1,608,442	+				+1.6
1,608,442	+				-0.9
1,608,442	+				+0.6
1,608,442	+				+0.5
1,608,442	+				-0.6
1,608,442	+				-0.5
1,608,443	-				+0.5
1,608,443	-				+0.0
1,608,443	-				+0.1
1,608,443	-				+1.0
1,608,446	-				-1.2
1,608,459	+				-1.5
1,608,459	+				+2.2
1,608,459	+				-0.3
1,608,459	+				+0.1
1,608,459	+				+1.3
1,608,459	+				+2.1
1,608,460	-				-0.3
1,608,460	-				+1.8
1,608,460	-				-0.1
1,608,460	-				-0.6
1,608,460	-				-0.5
1,608,478	+				-0.8
1,608,636	+		PFLU_RS07210	0.46	+0.0
1,608,636	+		PFLU_RS07210	0.46	-1.1
1,608,636	+		PFLU_RS07210	0.46	-1.2
1,608,636	+		PFLU_RS07210	0.46	+1.0
1,608,637	-		PFLU_RS07210	0.47	+3.0
1,608,637	-		PFLU_RS07210	0.47	-0.4
1,608,637	-		PFLU_RS07210	0.47	-0.8
1,608,637	-		PFLU_RS07210	0.47	+0.3
1,608,647	+		PFLU_RS07210	0.50	-2.6
1,608,647	+		PFLU_RS07210	0.50	-1.4
1,608,647	+		PFLU_RS07210	0.50	-1.5
1,608,647	+		PFLU_RS07210	0.50	-0.8
1,608,647	+		PFLU_RS07210	0.50	-1.2
1,608,647	+		PFLU_RS07210	0.50	-2.8
1,608,648	-		PFLU_RS07210	0.51	-0.1
1,608,648	-		PFLU_RS07210	0.51	+0.6
1,608,648	-		PFLU_RS07210	0.51	+0.0
1,608,648	-		PFLU_RS07210	0.51	+0.9
1,608,648	-		PFLU_RS07210	0.51	+1.6
1,608,648	-		PFLU_RS07210	0.51	-1.9
1,608,649	+		PFLU_RS07210	0.51	-2.4
1,608,649	+		PFLU_RS07210	0.51	-2.8
1,608,649	+		PFLU_RS07210	0.51	-0.5
1,608,650	-		PFLU_RS07210	0.51	-3.1
1,608,650	-		PFLU_RS07210	0.51	+0.0
1,608,650	-		PFLU_RS07210	0.51	+2.6
1,608,704	+		PFLU_RS07210	0.70	-2.3
1,608,704	+		PFLU_RS07210	0.70	+0.1
1,608,704	+		PFLU_RS07210	0.70	-2.4
1,608,704	+		PFLU_RS07210	0.70	+1.3
1,608,704	+		PFLU_RS07210	0.70	-0.2
1,608,705	-		PFLU_RS07210	0.70	-0.7
1,608,705	-		PFLU_RS07210	0.70	+1.9
1,608,705	-		PFLU_RS07210	0.70	+1.0
1,608,746	+		PFLU_RS07210	0.84	-2.5
1,608,747	-		PFLU_RS07210	0.85	-2.4
1,608,748	+		PFLU_RS07210	0.85	-1.6
1,608,748	+		PFLU_RS07210	0.85	-3.1
1,608,749	-		PFLU_RS07210	0.85	+1.6
1,608,760	+		PFLU_RS07210	0.89	-1.9
1,608,790	-				+1.5
1,608,836	+				-1.4
1,608,836	+				-1.2
1,608,836	+				+0.9
1,608,836	+				-0.6
1,608,836	+				+0.4
1,608,837	-				-1.1
1,608,837	-				+0.5
1,608,837	-				+1.2
1,608,837	-				+0.1
1,608,837	-				-0.4
1,608,837	-				-1.8
1,608,837	-				-0.9
1,608,855	+				-1.2
1,608,855	+				-1.5
1,608,855	+				+0.2
1,608,855	+				+0.2
1,608,855	+				-0.8
1,608,856	-				-2.0
1,608,856	-				+1.5
1,608,859	+				-1.5
1,608,859	+				-2.9
1,608,860	-				-0.4
1,608,860	-				+0.4
1,608,860	-				-1.0
1,608,877	+				+1.8
1,608,877	+				-0.8
1,608,877	+				-2.8
1,608,878	-				+0.6
1,608,878	-				-0.4
1,608,938	+				+1.2
1,608,938	+				-1.5
1,608,939	-				-1.4
1,608,939	-				-0.4
1,608,939	-				+1.2
1,608,971	+				-0.8
1,608,971	+				-2.2
1,608,971	+				-0.6
1,608,972	-				-1.4
1,608,972	-				+0.1
1,608,972	-				-0.6
1,608,995	+				-3.1
1,608,995	+				+1.4
1,608,995	+				-0.3
1,608,995	+				-1.5
1,608,995	+				+0.7
1,608,995	+				-2.6
1,608,995	+				+0.3
1,608,995	+				+1.5
1,608,995	+				-1.6
1,608,995	+				+1.2
1,608,995	+				-2.4
1,608,995	+				-0.1
1,608,995	+				-1.1
1,608,995	+				-0.6
1,608,995	+				+0.4
1,608,996	-				-2.0
1,608,996	-				+0.6
1,608,996	-				-2.8
1,608,996	-				+0.8
1,608,996	-				-0.6
1,608,996	-				+0.0
1,608,996	-				-0.9
1,608,996	-				+0.4
1,608,996	-				+0.4
1,608,996	-				+0.5
1,608,996	-				+1.2
1,608,996	-				-0.5
1,608,996	-				+1.3
1,608,996	-				+1.5
1,608,996	-				+1.3
1,608,996	-				-0.8
1,609,009	+				+2.2
1,609,030	+		PFLU_RS07215	0.10	-1.6
1,609,030	+		PFLU_RS07215	0.10	-1.1
1,609,030	+		PFLU_RS07215	0.10	-0.1
1,609,030	+		PFLU_RS07215	0.10	+0.4
1,609,030	+		PFLU_RS07215	0.10	-1.9
1,609,031	-		PFLU_RS07215	0.10	+1.6
1,609,031	-		PFLU_RS07215	0.10	-0.1
1,609,031	-		PFLU_RS07215	0.10	+2.2
1,609,031	-		PFLU_RS07215	0.10	-0.3
1,609,031	-		PFLU_RS07215	0.10	+1.5
1,609,056	+		PFLU_RS07215	0.16	-1.1
1,609,056	+		PFLU_RS07215	0.16	-1.2
1,609,056	+		PFLU_RS07215	0.16	-1.5
1,609,057	-		PFLU_RS07215	0.16	+0.4
1,609,057	-		PFLU_RS07215	0.16	-0.8
1,609,057	-		PFLU_RS07215	0.16	+0.8
1,609,057	-		PFLU_RS07215	0.16	-0.3
1,609,106	+		PFLU_RS07215	0.28	-0.4
1,609,107	-		PFLU_RS07215	0.28	+1.4
1,609,107	-		PFLU_RS07215	0.28	+0.6
1,609,129	+		PFLU_RS07215	0.33	-1.7
1,609,129	+		PFLU_RS07215	0.33	-0.1
1,609,130	-		PFLU_RS07215	0.33	-2.0
1,609,130	-		PFLU_RS07215	0.33	-0.4
1,609,130	-		PFLU_RS07215	0.33	+0.6
1,609,130	-		PFLU_RS07215	0.33	+1.6
1,609,137	+		PFLU_RS07215	0.35	-1.7
1,609,137	+		PFLU_RS07215	0.35	-1.2
1,609,137	+		PFLU_RS07215	0.35	+2.2
1,609,137	+		PFLU_RS07215	0.35	+0.6
1,609,137	+		PFLU_RS07215	0.35	-1.5
1,609,272	+		PFLU_RS07215	0.66	+1.2
1,609,272	+		PFLU_RS07215	0.66	-1.7
1,609,273	-		PFLU_RS07215	0.67	+0.4
1,609,273	-		PFLU_RS07215	0.67	-0.8
1,609,335	+		PFLU_RS07215	0.81	+0.9
1,609,335	+		PFLU_RS07215	0.81	-1.4
1,609,335	+		PFLU_RS07215	0.81	-1.2
1,609,335	+		PFLU_RS07215	0.81	-2.6
1,609,335	+		PFLU_RS07215	0.81	+1.0
1,609,335	+		PFLU_RS07215	0.81	-0.4
1,609,335	+		PFLU_RS07215	0.81	+0.2
1,609,336	-		PFLU_RS07215	0.81	+1.2
1,609,336	-		PFLU_RS07215	0.81	-1.5
1,609,336	-		PFLU_RS07215	0.81	+0.3
1,609,336	-		PFLU_RS07215	0.81	-1.2
1,609,336	-		PFLU_RS07215	0.81	+0.4
1,609,336	-		PFLU_RS07215	0.81	-1.3
1,609,413	+				-2.1
1,609,413	+				-0.8
1,609,413	+				-1.2
1,609,413	+				-0.8
1,609,413	+				+1.2
1,609,413	+				+2.2
1,609,413	+				-3.3
1,609,413	+				-2.2
1,609,413	+				+0.2
1,609,413	+				-0.4
1,609,414	-				-0.4
1,609,414	-				+0.3
1,609,414	-				-1.1
1,609,414	-				+0.7
1,609,414	-				-0.4
1,609,414	-				+1.8
1,609,414	-				-0.2
1,609,414	-				+0.2
1,609,414	-				-2.0
1,609,414	-				-1.2
1,609,414	-				+1.1
1,609,414	-				+0.6
1,609,414	-				+0.6
1,609,414	-				-0.5
1,609,414	-				-0.0
1,609,414	-				+0.9
1,609,414	-				-1.9
1,609,414	-				+1.2
1,609,414	-				+2.3
1,609,414	-				+1.0
1,609,435	+				+1.4
1,609,435	+				-0.5
1,609,436	-				-0.5
1,609,436	-				+2.1
1,609,474	+				+1.6
1,609,522	+				-2.4
1,609,523	-				+0.7
1,609,576	+		PFLU_RS07220	0.12	-0.1
1,609,576	+		PFLU_RS07220	0.12	+3.0
1,609,576	+		PFLU_RS07220	0.12	+0.8
1,609,781	+		PFLU_RS07220	0.31	+1.0
1,609,781	+		PFLU_RS07220	0.31	-0.0
1,609,781	+		PFLU_RS07220	0.31	-2.5
1,609,781	+		PFLU_RS07220	0.31	-1.9
1,609,781	+		PFLU_RS07220	0.31	-0.8
1,609,781	+		PFLU_RS07220	0.31	+1.2
1,609,781	+		PFLU_RS07220	0.31	-0.1
1,609,782	-		PFLU_RS07220	0.31	+0.7
1,609,782	-		PFLU_RS07220	0.31	-0.6
1,609,782	-		PFLU_RS07220	0.31	-0.8
1,609,802	-		PFLU_RS07220	0.33	-2.5
1,609,975	+		PFLU_RS07220	0.50	-2.3
1,609,976	-		PFLU_RS07220	0.50	+2.2
1,610,107	+		PFLU_RS07220	0.63	-0.7
1,610,107	+		PFLU_RS07220	0.63	-0.7
1,610,107	+		PFLU_RS07220	0.63	+1.6
1,610,108	-		PFLU_RS07220	0.63	-0.5
1,610,108	-		PFLU_RS07220	0.63	+0.2
1,610,108	-		PFLU_RS07220	0.63	+2.1
1,610,108	-		PFLU_RS07220	0.63	+1.7
1,610,108	-		PFLU_RS07220	0.63	-1.8
1,610,108	-		PFLU_RS07220	0.63	-0.9
1,610,228	+		PFLU_RS07220	0.74	-1.9
1,610,228	+		PFLU_RS07220	0.74	-0.7
1,610,228	+		PFLU_RS07220	0.74	+1.2
1,610,228	+		PFLU_RS07220	0.74	-2.5
1,610,228	+		PFLU_RS07220	0.74	+0.4
1,610,228	+		PFLU_RS07220	0.74	+0.6
1,610,229	-		PFLU_RS07220	0.74	+1.2
1,610,229	-		PFLU_RS07220	0.74	+0.3
1,610,229	-		PFLU_RS07220	0.74	+1.4
1,610,229	-		PFLU_RS07220	0.74	+1.0
1,610,229	-		PFLU_RS07220	0.74	-1.9
1,610,310	+		PFLU_RS07220	0.82	-1.5
1,610,310	+		PFLU_RS07220	0.82	+1.5
1,610,310	+		PFLU_RS07220	0.82	+1.3
1,610,310	+		PFLU_RS07220	0.82	+0.6
1,610,310	+		PFLU_RS07220	0.82	-1.6
1,610,310	+		PFLU_RS07220	0.82	-0.8
1,610,310	+		PFLU_RS07220	0.82	+1.5
1,610,310	+		PFLU_RS07220	0.82	+1.0
1,610,310	+		PFLU_RS07220	0.82	+1.6
1,610,311	-		PFLU_RS07220	0.82	+0.4
1,610,311	-		PFLU_RS07220	0.82	+0.6
1,610,311	-		PFLU_RS07220	0.82	-0.5
1,610,311	-		PFLU_RS07220	0.82	+0.4
1,610,311	-		PFLU_RS07220	0.82	-0.8
1,610,311	-		PFLU_RS07220	0.82	-0.8
1,610,323	+		PFLU_RS07220	0.83	+2.2
1,610,343	+		PFLU_RS07220	0.85	+0.5
1,610,343	+		PFLU_RS07220	0.85	-1.7
1,610,344	-		PFLU_RS07220	0.85	-1.1
1,610,344	-		PFLU_RS07220	0.85	-0.2
1,610,382	+		PFLU_RS07220	0.89	+0.2
1,610,382	+		PFLU_RS07220	0.89	-0.2
1,610,382	+		PFLU_RS07220	0.89	+0.5
1,610,382	+		PFLU_RS07220	0.89	+2.1
1,610,383	-		PFLU_RS07220	0.89	+1.8
1,610,383	-		PFLU_RS07220	0.89	+0.4
1,610,383	-		PFLU_RS07220	0.89	+0.9
1,610,383	-		PFLU_RS07220	0.89	+1.9