Strain Fitness in Pseudomonas sp. S08-1 around OH686_22720

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
4,608,851	+		OH686_22710	0.86	-0.7
4,608,851	+		OH686_22710	0.86	-0.9
4,608,851	+		OH686_22710	0.86	+0.5
4,608,852	-		OH686_22710	0.86	+0.3
4,608,852	-		OH686_22710	0.86	-0.4
4,608,852	-		OH686_22710	0.86	+0.4
4,608,852	-		OH686_22710	0.86	+0.6
4,608,852	-		OH686_22710	0.86	-0.8
4,609,010	+				-1.9
4,609,010	+				-0.1
4,609,010	+				+0.1
4,609,010	+				-0.2
4,609,010	+				-0.4
4,609,011	-				-0.7
4,609,011	-				-0.7
4,609,091	+		OH686_22715	0.20	+0.2
4,609,092	-		OH686_22715	0.20	-0.1
4,609,092	-		OH686_22715	0.20	-0.9
4,609,104	-		OH686_22715	0.23	+0.3
4,609,178	+		OH686_22715	0.41	+0.0
4,609,178	+		OH686_22715	0.41	-0.3
4,609,178	+		OH686_22715	0.41	-0.3
4,609,178	+		OH686_22715	0.41	+0.4
4,609,179	-		OH686_22715	0.42	-1.0
4,609,223	+		OH686_22715	0.52	-0.1
4,609,224	-		OH686_22715	0.53	-1.1
4,609,224	-		OH686_22715	0.53	-0.4
4,609,224	-		OH686_22715	0.53	+0.9
4,609,224	-		OH686_22715	0.53	+0.1
4,609,224	-		OH686_22715	0.53	-0.8
4,609,224	-		OH686_22715	0.53	-0.1
4,609,224	-		OH686_22715	0.53	-0.5
4,609,319	+		OH686_22715	0.76	-0.6
4,609,319	+		OH686_22715	0.76	+0.7
4,609,319	+		OH686_22715	0.76	+3.2
4,609,319	+		OH686_22715	0.76	-0.6
4,609,319	+		OH686_22715	0.76	-0.2
4,609,320	-		OH686_22715	0.76	-1.0
4,609,320	-		OH686_22715	0.76	-0.1
4,609,320	-		OH686_22715	0.76	-0.9
4,609,320	-		OH686_22715	0.76	+0.6
4,609,320	-		OH686_22715	0.76	-0.5
4,609,320	-		OH686_22715	0.76	+0.3
4,609,320	-		OH686_22715	0.76	+1.0
4,609,320	-		OH686_22715	0.76	-0.9
4,609,320	-		OH686_22715	0.76	+0.2
4,609,320	-		OH686_22715	0.76	+0.2
4,609,328	+		OH686_22715	0.78	-1.1
4,609,328	+		OH686_22715	0.78	-0.7
4,609,328	+		OH686_22715	0.78	-0.4
4,609,328	+		OH686_22715	0.78	-0.3
4,609,328	+		OH686_22715	0.78	+0.8
4,609,328	+		OH686_22715	0.78	-0.3
4,609,328	+		OH686_22715	0.78	+1.2
4,609,329	-		OH686_22715	0.78	+1.1
4,609,329	-		OH686_22715	0.78	+0.9
4,609,329	-		OH686_22715	0.78	-0.0
4,609,329	-		OH686_22715	0.78	-0.1
4,609,352	+		OH686_22715	0.84	-0.3
4,609,352	+		OH686_22715	0.84	+0.7
4,609,352	+		OH686_22715	0.84	-0.5
4,609,352	+		OH686_22715	0.84	-1.0
4,609,429	+				+1.3
4,609,429	+				+1.4
4,609,430	-				-0.7
4,609,430	-				-0.9
4,609,430	-				-2.3
4,609,430	-				+0.6
4,609,442	+				-0.7
4,609,442	+				-0.2
4,609,459	+				-1.6
4,609,459	+				-0.2
4,609,459	+				-0.1
4,609,459	+				+0.9
4,609,459	+				-1.2
4,609,460	-				-0.3
4,609,460	-				-0.3
4,609,460	-				-0.1
4,609,460	-				+0.1
4,609,460	-				-0.5
4,609,460	-				+0.1
4,609,460	-				+0.0
4,609,460	-				+0.3
4,609,460	-				+1.0
4,609,460	-				+0.2
4,609,461	+				-0.1
4,609,461	+				-0.6
4,609,461	+				+0.2
4,609,461	+				+0.6
4,609,461	+				+0.2
4,609,461	+				-1.5
4,609,461	+				+0.5
4,609,462	-				+0.1
4,609,462	-				+1.3
4,609,462	-				+0.4
4,609,508	+				+0.0
4,609,508	+				-1.3
4,609,508	+				-0.2
4,609,508	+				+0.5
4,609,508	+				-1.9
4,609,508	+				+0.5
4,609,508	+				+0.1
4,609,509	-				+0.7
4,609,509	-				+0.1
4,609,509	-				-0.8
4,609,509	-				-0.8
4,609,509	-				+1.3
4,609,683	+		OH686_22720	0.21	+0.0
4,609,683	+		OH686_22720	0.21	+0.0
4,609,683	+		OH686_22720	0.21	-0.3
4,609,684	-		OH686_22720	0.21	-0.3
4,609,684	-		OH686_22720	0.21	+0.0
4,609,711	-		OH686_22720	0.25	-0.8
4,610,151	+		OH686_22720	0.89	+0.0
4,610,151	+		OH686_22720	0.89	+0.2
4,610,151	+		OH686_22720	0.89	+0.0
4,610,151	+		OH686_22720	0.89	+0.0
4,610,151	+		OH686_22720	0.89	-1.4
4,610,152	-		OH686_22720	0.89	+0.0
4,610,152	-		OH686_22720	0.89	+0.0
4,610,152	-		OH686_22720	0.89	+0.7
4,610,236	+				+0.2
4,610,236	+				+0.6
4,610,236	+				-1.3
4,610,236	+				+0.5
4,610,236	+				-1.9
4,610,236	+				-0.4
4,610,236	+				-0.4
4,610,237	-				-0.3
4,610,237	-				+0.5
4,610,237	-				-0.2
4,610,237	-				-0.4
4,610,237	-				+0.0
4,610,237	-				+0.0
4,610,452	+		OH686_22725	0.54	-0.1
4,610,567	+				-0.4
4,610,567	+				-0.4
4,610,568	-				-0.8
4,610,568	-				+0.2
4,610,568	-				+0.5
4,610,597	-				-0.3
4,610,609	+				+0.6
4,610,609	+				-0.5
4,610,610	-				+0.6
4,610,631	+				-0.2
4,610,631	+				-0.3
4,610,631	+				-0.0
4,610,631	+				-0.6
4,610,631	+				-0.4
4,610,631	+				-1.1
4,610,631	+				+0.0
4,610,631	+				+0.3
4,610,631	+				+0.1
4,610,631	+				+0.1
4,610,631	+				-0.1
4,610,631	+				+0.6
4,610,632	-				+0.0
4,610,632	-				+0.6
4,610,632	-				+0.3
4,610,632	-				+0.3
4,610,632	-				+1.0
4,610,632	-				-1.1
4,610,632	-				-0.7
4,610,632	-				+0.6
4,610,632	-				+0.2
4,610,632	-				-0.2
4,610,632	-				+0.4
4,610,633	+				+0.6
4,610,633	+				-0.3
4,610,633	+				-0.2
4,610,633	+				-0.6
4,610,634	-				+0.2
4,610,634	-				-0.7
4,610,634	-				-0.8
4,610,634	-				-0.2
4,610,655	+				-0.2
4,610,655	+				+0.1
4,610,656	-				+0.2
4,610,656	-				+0.7
4,610,656	-				+0.3
4,610,709	+				+0.3
4,610,709	+				-0.4
4,610,709	+				+0.1
4,610,736	+				-1.5
4,610,736	+				+1.7
4,610,736	+				-1.1
4,610,737	-				+0.1
4,610,737	-				-1.0
4,610,737	-				-0.5