Strain Fitness in Pseudomonas sp. S08-1 around OH686_19335

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
3,973,920	+		OH686_19315	0.24	+0.7
3,973,920	+		OH686_19315	0.24	-0.1
3,973,920	+		OH686_19315	0.24	-0.8
3,973,920	+		OH686_19315	0.24	-0.0
3,973,920	+		OH686_19315	0.24	-0.7
3,973,920	+		OH686_19315	0.24	-1.3
3,973,920	+		OH686_19315	0.24	+0.4
3,973,920	+		OH686_19315	0.24	+0.3
3,973,920	+		OH686_19315	0.24	-0.1
3,973,920	+		OH686_19315	0.24	+1.7
3,973,921	-		OH686_19315	0.24	+0.1
3,973,921	-		OH686_19315	0.24	-0.6
3,973,921	-		OH686_19315	0.24	+0.4
3,973,921	-		OH686_19315	0.24	+0.2
3,973,921	-		OH686_19315	0.24	-0.8
3,973,921	-		OH686_19315	0.24	-0.7
3,973,921	-		OH686_19315	0.24	-0.4
3,973,921	-		OH686_19315	0.24	-0.6
3,973,921	-		OH686_19315	0.24	+0.2
3,973,921	-		OH686_19315	0.24	-0.8
3,973,921	-		OH686_19315	0.24	-1.8
3,973,921	-		OH686_19315	0.24	-0.1
3,973,921	-		OH686_19315	0.24	+0.0
3,973,945	+		OH686_19315	0.36	-0.4
3,973,945	+		OH686_19315	0.36	+0.9
3,973,945	+		OH686_19315	0.36	-0.2
3,973,945	+		OH686_19315	0.36	-0.6
3,973,946	-		OH686_19315	0.36	+0.1
3,973,967	+		OH686_19315	0.46	+0.2
3,973,968	-		OH686_19315	0.47	-0.5
3,973,985	+				-0.4
3,973,985	+				-0.5
3,973,985	+				+0.2
3,973,985	+				+0.4
3,973,985	+				-0.7
3,973,985	+				+0.9
3,973,985	+				+0.6
3,973,985	+				+0.0
3,973,985	+				+0.5
3,973,985	+				-0.3
3,973,986	-				-0.3
3,973,986	-				-0.1
3,973,986	-				-0.2
3,973,986	-				-0.6
3,973,986	-				+0.1
3,973,986	-				-0.8
3,973,986	-				+0.3
3,973,986	-				-1.0
3,973,986	-				-0.5
3,973,986	-				-1.4
3,973,986	-				-0.3
3,973,986	-				+0.0
3,973,986	-				-1.8
3,973,986	-				-0.8
3,973,986	-				-0.1
3,973,986	-				+0.2
3,973,986	-				+0.7
3,973,986	-				-0.5
3,974,112	+		OH686_19320	0.54	+0.3
3,974,113	-		OH686_19320	0.54	-0.7
3,974,113	-		OH686_19320	0.54	-1.1
3,974,161	+		OH686_19320	0.74	+0.5
3,974,162	-		OH686_19320	0.74	-0.4
3,974,162	-		OH686_19320	0.74	-0.8
3,974,162	-		OH686_19320	0.74	-0.5
3,974,162	-		OH686_19320	0.74	-1.3
3,974,196	-		OH686_19320	0.88	-1.1
3,974,196	-		OH686_19320	0.88	-1.5
3,974,196	-		OH686_19320	0.88	+0.2
3,974,222	+				-0.8
3,974,222	+				-0.6
3,974,222	+				-0.7
3,974,222	+				+0.7
3,974,222	+				-0.9
3,974,223	-				-1.1
3,974,223	-				+0.6
3,974,223	-				+1.8
3,974,223	-				-0.2
3,974,223	-				-0.7
3,974,226	+				-0.9
3,974,226	+				-0.6
3,974,226	+				+0.4
3,974,226	+				+0.0
3,974,226	+				-0.1
3,974,226	+				+0.5
3,974,227	-				+0.1
3,974,227	-				-0.1
3,974,227	-				-0.1
3,974,227	-				-0.3
3,974,282	+		OH686_19325	0.18	+0.3
3,974,283	-		OH686_19325	0.19	+0.1
3,974,315	+		OH686_19325	0.28	-0.5
3,974,315	+		OH686_19325	0.28	+1.0
3,974,315	+		OH686_19325	0.28	-0.8
3,974,316	-		OH686_19325	0.29	-0.5
3,974,316	-		OH686_19325	0.29	-0.9
3,974,691	-		OH686_19330	0.40	-0.2
3,974,691	-		OH686_19330	0.40	-0.5
3,974,691	-		OH686_19330	0.40	-0.9
3,974,691	-		OH686_19330	0.40	-0.3
3,974,691	-		OH686_19330	0.40	+0.2
3,974,691	-		OH686_19330	0.40	+1.1
3,974,691	-		OH686_19330	0.40	-0.1
3,974,691	-		OH686_19330	0.40	+0.1
3,974,691	-		OH686_19330	0.40	-1.5
3,974,691	-		OH686_19330	0.40	-0.6
3,974,699	+		OH686_19330	0.42	-0.8
3,974,699	+		OH686_19330	0.42	-0.1
3,974,699	+		OH686_19330	0.42	+0.8
3,974,700	-		OH686_19330	0.43	-0.6
3,974,726	+		OH686_19330	0.50	+1.7
3,974,726	+		OH686_19330	0.50	-0.8
3,974,727	-		OH686_19330	0.50	+0.2
3,974,727	-		OH686_19330	0.50	-0.2
3,974,727	-		OH686_19330	0.50	-0.7
3,974,727	-		OH686_19330	0.50	-0.6
3,974,832	+		OH686_19330	0.78	-0.6
3,974,832	+		OH686_19330	0.78	-0.3
3,974,832	+		OH686_19330	0.78	-1.1
3,974,832	+		OH686_19330	0.78	+0.2
3,974,832	+		OH686_19330	0.78	+1.2
3,974,832	+		OH686_19330	0.78	+0.2
3,974,832	+		OH686_19330	0.78	-0.7
3,974,833	-		OH686_19330	0.78	+0.1
3,974,833	-		OH686_19330	0.78	+0.3
3,974,833	-		OH686_19330	0.78	-1.8
3,974,833	-		OH686_19330	0.78	-0.3
3,974,833	-		OH686_19330	0.78	-1.6
3,974,833	-		OH686_19330	0.78	+0.8
3,975,059	+		OH686_19335	0.55	-1.3
3,975,060	-		OH686_19335	0.56	-2.2
3,975,060	-		OH686_19335	0.56	-0.2
3,975,060	-		OH686_19335	0.56	-0.5
3,975,203	+				+0.4
3,975,203	+				-0.4
3,975,203	+				+0.2
3,975,203	+				-0.5
3,975,203	+				+0.1
3,975,203	+				+0.9
3,975,203	+				-1.7
3,975,204	-				-0.0
3,975,204	-				+1.2
3,975,204	-				+0.3
3,975,204	-				+0.2
3,975,204	-				+1.6
3,975,204	-				-0.3
3,975,204	-				-0.3
3,975,204	-				+0.3
3,975,204	-				-0.4
3,975,204	-				-0.0
3,975,204	-				-0.1
3,975,262	+				-0.5
3,975,262	+				-0.1
3,975,262	+				-0.4
3,975,263	-				-0.2
3,975,349	+				-0.9
3,975,350	-				-0.4
3,975,350	-				-0.8
3,975,412	+				-0.1
3,975,412	+				+0.2
3,975,412	+				-0.3
3,975,412	+				-1.0
3,975,412	+				-0.7
3,975,413	-				-0.9
3,975,413	-				-0.8
3,975,413	-				-0.1
3,975,413	-				-0.3
3,975,413	-				-0.4
3,975,413	-				-0.3
3,975,413	-				-0.1
3,975,574	+		OH686_19340	0.37	-0.5
3,975,574	+		OH686_19340	0.37	-1.0
3,975,574	+		OH686_19340	0.37	+0.0
3,975,575	-		OH686_19340	0.37	+0.2
3,975,575	-		OH686_19340	0.37	+0.5
3,975,575	-		OH686_19340	0.37	-0.9
3,975,620	+		OH686_19340	0.52	+0.2
3,975,711	+		OH686_19340	0.81	-0.8
3,975,711	+		OH686_19340	0.81	+1.0
3,975,711	+		OH686_19340	0.81	-0.4
3,975,711	+		OH686_19340	0.81	-0.3
3,975,711	+		OH686_19340	0.81	+0.7
3,975,711	+		OH686_19340	0.81	+0.5
3,975,711	+		OH686_19340	0.81	-0.2
3,975,712	-		OH686_19340	0.82	-1.2
3,975,712	-		OH686_19340	0.82	-0.2
3,975,767	+				-0.6
3,975,767	+				-0.0
3,975,767	+				-0.1
3,975,767	+				-0.4
3,975,767	+				-0.5
3,975,767	+				-0.2
3,975,768	-				+0.7
3,975,768	-				-0.3
3,975,768	-				+0.2
3,975,768	-				-1.2
3,975,768	-				+0.1
3,975,768	-				-0.4
3,975,899	-		OH686_19345	0.37	+1.0
3,975,954	+		OH686_19345	0.64	+0.1
3,976,117	-		OH686_19350	0.10	+0.3
3,976,129	-		OH686_19350	0.11	-1.4
3,976,129	-		OH686_19350	0.11	-0.3
3,976,129	-		OH686_19350	0.11	-0.2
3,976,145	+		OH686_19350	0.13	+0.0
3,976,146	-		OH686_19350	0.13	-1.0
3,976,152	+		OH686_19350	0.14	+0.4
3,976,152	+		OH686_19350	0.14	+0.2
3,976,152	+		OH686_19350	0.14	+0.9
3,976,152	+		OH686_19350	0.14	-1.1
3,976,152	+		OH686_19350	0.14	-0.7
3,976,152	+		OH686_19350	0.14	-0.5
3,976,152	+		OH686_19350	0.14	-0.3
3,976,152	+		OH686_19350	0.14	-0.3
3,976,153	-		OH686_19350	0.14	+0.9
3,976,153	-		OH686_19350	0.14	-0.1
3,976,153	-		OH686_19350	0.14	+0.0
3,976,153	-		OH686_19350	0.14	-0.8
3,976,153	-		OH686_19350	0.14	-0.8
3,976,153	-		OH686_19350	0.14	+0.2
3,976,153	-		OH686_19350	0.14	+1.2
3,976,153	-		OH686_19350	0.14	+0.7
3,976,153	-		OH686_19350	0.14	-0.3
3,976,153	-		OH686_19350	0.14	-0.7