Strain Fitness in Pseudomonas sp. S08-1 around OH686_19190

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
3,957,208	+				+0.3
3,957,208	+				-0.3
3,957,208	+				-0.0
3,957,208	+				-0.6
3,957,208	+				-0.6
3,957,209	-				-0.6
3,957,209	-				+0.3
3,957,209	-				-0.2
3,957,209	-				+0.1
3,957,209	-				+0.1
3,957,299	+		OH686_19180	0.13	-1.7
3,957,299	+		OH686_19180	0.13	+1.2
3,957,299	+		OH686_19180	0.13	-1.4
3,957,300	-		OH686_19180	0.13	-0.4
3,957,300	-		OH686_19180	0.13	+1.3
3,957,317	+		OH686_19180	0.16	+0.3
3,957,488	+		OH686_19180	0.41	+1.6
3,957,488	+		OH686_19180	0.41	+1.5
3,957,488	+		OH686_19180	0.41	-0.2
3,957,488	+		OH686_19180	0.41	+0.2
3,957,488	+		OH686_19180	0.41	-0.5
3,957,488	+		OH686_19180	0.41	-1.4
3,957,488	+		OH686_19180	0.41	-0.2
3,957,488	+		OH686_19180	0.41	-0.4
3,957,489	-		OH686_19180	0.41	-0.6
3,957,489	-		OH686_19180	0.41	-0.2
3,957,489	-		OH686_19180	0.41	-0.4
3,957,489	-		OH686_19180	0.41	+0.6
3,957,489	-		OH686_19180	0.41	+0.7
3,957,489	-		OH686_19180	0.41	+0.1
3,957,489	-		OH686_19180	0.41	-0.3
3,957,489	-		OH686_19180	0.41	+0.6
3,957,489	-		OH686_19180	0.41	-1.8
3,957,489	-		OH686_19180	0.41	+0.4
3,957,489	-		OH686_19180	0.41	+0.3
3,957,489	-		OH686_19180	0.41	-0.4
3,957,489	-		OH686_19180	0.41	+0.0
3,957,489	-		OH686_19180	0.41	-0.4
3,957,489	-		OH686_19180	0.41	-0.4
3,957,502	+		OH686_19180	0.43	-1.8
3,957,502	+		OH686_19180	0.43	-0.2
3,957,528	+		OH686_19180	0.47	+0.9
3,957,587	+		OH686_19180	0.56	-0.4
3,957,587	+		OH686_19180	0.56	+1.8
3,957,587	+		OH686_19180	0.56	+0.1
3,957,587	+		OH686_19180	0.56	+1.4
3,957,588	-		OH686_19180	0.56	-0.4
3,957,588	-		OH686_19180	0.56	+0.3
3,957,588	-		OH686_19180	0.56	+0.2
3,957,743	+		OH686_19180	0.79	+0.3
3,957,744	-		OH686_19180	0.79	-0.4
3,957,744	-		OH686_19180	0.79	+1.2
3,957,744	-		OH686_19180	0.79	+0.0
3,957,744	-		OH686_19180	0.79	+1.0
3,957,744	-		OH686_19180	0.79	-0.5
3,957,744	-		OH686_19180	0.79	-1.7
3,957,744	-		OH686_19180	0.79	+0.7
3,957,744	-		OH686_19180	0.79	+0.2
3,957,755	+		OH686_19180	0.81	-1.6
3,957,755	+		OH686_19180	0.81	-1.1
3,957,755	+		OH686_19180	0.81	+0.2
3,957,755	+		OH686_19180	0.81	-1.2
3,957,776	+		OH686_19180	0.84	+0.2
3,957,990	+		OH686_19185	0.64	+0.4
3,958,003	+		OH686_19185	0.82	-0.8
3,958,044	+				-0.3
3,958,044	+				-0.3
3,958,044	+				+0.0
3,958,045	-				+1.3
3,958,045	-				-0.4
3,958,045	-				-0.1
3,958,045	-				-0.5
3,958,084	+				+0.3
3,958,084	+				+0.6
3,958,084	+				+1.1
3,958,084	+				-0.1
3,958,084	+				+0.5
3,958,084	+				-0.5
3,958,085	-				-0.0
3,958,085	-				+0.2
3,958,085	-				-0.5
3,958,086	+				+0.0
3,958,086	+				+0.7
3,958,086	+				+0.2
3,958,086	+				-1.2
3,958,087	-				+0.4
3,958,087	-				-0.6
3,958,087	-				+0.4
3,958,107	+				+0.3
3,958,107	+				-0.6
3,958,107	+				+0.5
3,958,107	+				-0.8
3,958,107	+				-0.6
3,958,107	+				-0.7
3,958,107	+				-0.6
3,958,108	-				+0.8
3,958,108	-				-0.5
3,958,108	-				-0.9
3,958,108	-				+0.4
3,958,212	+				+0.2
3,958,212	+				+0.3
3,958,212	+				-0.2
3,958,213	-				+0.8
3,958,213	-				-0.6
3,958,213	-				-0.2
3,958,269	+		OH686_19190	0.14	-0.7
3,958,269	+		OH686_19190	0.14	-0.7
3,958,269	+		OH686_19190	0.14	-2.2
3,958,269	+		OH686_19190	0.14	+0.2
3,958,269	+		OH686_19190	0.14	-0.8
3,958,269	+		OH686_19190	0.14	-0.7
3,958,269	+		OH686_19190	0.14	-1.9
3,958,269	+		OH686_19190	0.14	-1.4
3,958,269	+		OH686_19190	0.14	-0.8
3,958,270	-		OH686_19190	0.14	+0.1
3,958,270	-		OH686_19190	0.14	-1.4
3,958,270	-		OH686_19190	0.14	-1.1
3,958,270	-		OH686_19190	0.14	-0.5
3,958,270	-		OH686_19190	0.14	-0.9
3,958,270	-		OH686_19190	0.14	-0.6
3,958,270	-		OH686_19190	0.14	-0.2
3,958,272	+		OH686_19190	0.14	-1.4
3,958,272	+		OH686_19190	0.14	-0.9
3,958,272	+		OH686_19190	0.14	+0.1
3,958,272	+		OH686_19190	0.14	-0.6
3,958,273	-		OH686_19190	0.14	+0.3
3,958,273	-		OH686_19190	0.14	+0.4
3,958,273	-		OH686_19190	0.14	-1.1
3,958,273	-		OH686_19190	0.14	-0.4
3,958,490	-		OH686_19190	0.34	-0.2
3,958,490	-		OH686_19190	0.34	-0.6
3,958,490	-		OH686_19190	0.34	-1.4
3,958,542	+		OH686_19190	0.39	-1.5
3,958,542	+		OH686_19190	0.39	+0.2
3,958,542	+		OH686_19190	0.39	-0.6
3,958,542	+		OH686_19190	0.39	-1.9
3,958,542	+		OH686_19190	0.39	+0.6
3,958,542	+		OH686_19190	0.39	-0.6
3,958,542	+		OH686_19190	0.39	-0.7
3,958,542	+		OH686_19190	0.39	-2.0
3,958,542	+		OH686_19190	0.39	-0.8
3,958,542	+		OH686_19190	0.39	-2.2
3,958,542	+		OH686_19190	0.39	-2.1
3,958,542	+		OH686_19190	0.39	-1.7
3,958,542	+		OH686_19190	0.39	-0.7
3,958,543	-		OH686_19190	0.39	-2.7
3,958,543	-		OH686_19190	0.39	-0.3
3,958,543	-		OH686_19190	0.39	+0.0
3,958,677	+		OH686_19190	0.52	+1.4
3,958,677	+		OH686_19190	0.52	-1.5
3,958,677	+		OH686_19190	0.52	-1.0
3,958,678	-		OH686_19190	0.52	-0.6
3,958,678	-		OH686_19190	0.52	-1.3
3,958,678	-		OH686_19190	0.52	-1.3
3,958,678	-		OH686_19190	0.52	+0.1
3,958,779	+		OH686_19190	0.62	+0.0
3,958,929	+		OH686_19190	0.76	-0.1
3,958,929	+		OH686_19190	0.76	-0.4
3,958,929	+		OH686_19190	0.76	-1.9
3,958,929	+		OH686_19190	0.76	-1.4
3,958,930	-		OH686_19190	0.76	-0.8
3,958,930	-		OH686_19190	0.76	-0.1
3,958,930	-		OH686_19190	0.76	-2.3
3,958,930	-		OH686_19190	0.76	-1.9
3,958,930	-		OH686_19190	0.76	-0.4
3,958,930	-		OH686_19190	0.76	-0.6
3,958,930	-		OH686_19190	0.76	-1.8
3,958,930	-		OH686_19190	0.76	-0.5
3,958,930	-		OH686_19190	0.76	-2.0
3,959,037	-		OH686_19190	0.86	-0.6
3,959,037	-		OH686_19190	0.86	-0.6
3,959,037	-		OH686_19190	0.86	-1.1
3,959,127	-				-2.2
3,959,185	+				+1.2
3,959,186	-				-0.5
3,959,186	-				+0.2
3,959,358	+				-0.3
3,959,359	-				+0.2
3,959,371	+				+0.3
3,959,372	-				-1.7
3,959,372	-				+1.8
3,959,379	+				+1.8
3,959,459	-		OH686_19195	0.15	-0.4
3,959,459	-		OH686_19195	0.15	-0.4
3,959,572	+		OH686_19195	0.23	-1.3
3,959,573	-		OH686_19195	0.23	-0.2
3,959,573	-		OH686_19195	0.23	+0.9
3,959,668	+		OH686_19195	0.30	-0.4
3,959,668	+		OH686_19195	0.30	+2.2
3,959,668	+		OH686_19195	0.30	+0.6
3,959,669	-		OH686_19195	0.30	-0.2
3,959,669	-		OH686_19195	0.30	+0.8
3,959,669	-		OH686_19195	0.30	+0.4
3,959,695	-		OH686_19195	0.32	-0.3
3,959,875	+		OH686_19195	0.45	-0.4
3,959,993	-		OH686_19195	0.53	+0.8
3,960,156	-		OH686_19195	0.64	-2.2
3,960,156	-		OH686_19195	0.64	+0.8