Strain Fitness in Pseudomonas sp. S08-1 around OH686_18760

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
3,883,784	+				+0.6
3,883,784	+				+0.2
3,883,784	+				-1.3
3,883,785	-				+0.5
3,883,800	+				+0.2
3,883,800	+				+1.3
3,883,801	-				+0.6
3,883,801	-				+0.2
3,884,112	+		OH686_18750	0.74	+0.4
3,884,112	+		OH686_18750	0.74	+0.4
3,884,112	+		OH686_18750	0.74	-0.4
3,884,112	+		OH686_18750	0.74	-2.8
3,884,113	-		OH686_18750	0.74	+1.0
3,884,118	+		OH686_18750	0.76	-0.7
3,884,118	+		OH686_18750	0.76	-1.5
3,884,118	+		OH686_18750	0.76	+0.1
3,884,119	-		OH686_18750	0.76	-0.2
3,884,119	-		OH686_18750	0.76	+0.1
3,884,119	-		OH686_18750	0.76	-0.2
3,884,259	-		OH686_18755	0.20	+1.2
3,884,259	-		OH686_18755	0.20	+0.5
3,884,280	-		OH686_18755	0.27	+0.3
3,884,292	-		OH686_18755	0.31	-0.7
3,884,354	+		OH686_18755	0.52	-0.2
3,884,354	+		OH686_18755	0.52	-0.1
3,884,354	+		OH686_18755	0.52	+0.1
3,884,354	+		OH686_18755	0.52	+0.5
3,884,355	-		OH686_18755	0.53	-0.1
3,884,355	-		OH686_18755	0.53	-0.3
3,884,407	-		OH686_18755	0.70	-0.2
3,884,407	-		OH686_18755	0.70	-0.9
3,884,493	+				-1.1
3,884,493	+				-1.7
3,884,493	+				-1.7
3,884,493	+				-0.4
3,884,494	-				-1.8
3,884,494	-				+0.1
3,884,538	-				+0.2
3,884,538	-				+1.3
3,884,538	-				-0.5
3,884,548	+				-1.3
3,884,578	+				+0.0
3,884,578	+				+0.4
3,884,578	+				+1.4
3,884,578	+				+0.4
3,884,578	+				+0.1
3,884,578	+				+0.0
3,884,578	+				-1.1
3,884,579	-				+0.3
3,884,579	-				-0.9
3,884,579	-				-1.5
3,884,579	-				+0.2
3,884,579	-				-0.7
3,884,579	-				-0.2
3,884,579	-				-0.9
3,884,579	-				-0.4
3,884,588	-				+0.7
3,884,588	-				+0.5
3,884,588	-				-0.0
3,884,588	-				-0.2
3,884,588	-				+0.6
3,884,588	-				+0.3
3,884,588	-				-0.5
3,884,588	-				+1.5
3,884,588	-				-0.3
3,884,733	+		OH686_18760	0.21	+0.2
3,884,847	+		OH686_18760	0.52	-0.3
3,884,847	+		OH686_18760	0.52	-0.0
3,884,847	+		OH686_18760	0.52	-1.5
3,884,848	-		OH686_18760	0.52	-0.8
3,884,848	-		OH686_18760	0.52	-0.2
3,884,848	-		OH686_18760	0.52	-0.7
3,885,027	+				+0.3
3,885,027	+				-0.8
3,885,027	+				-0.3
3,885,027	+				-0.4
3,885,027	+				-0.7
3,885,027	+				-0.0
3,885,027	+				-0.8
3,885,027	+				+0.6
3,885,027	+				-0.2
3,885,027	+				-0.3
3,885,027	+				+0.5
3,885,027	+				+0.5
3,885,027	+				+0.4
3,885,027	+				-0.6
3,885,027	+				-1.0
3,885,028	-				-0.7
3,885,028	-				-0.0
3,885,028	-				+0.6
3,885,028	-				-0.2
3,885,028	-				+1.6
3,885,028	-				+1.7
3,885,028	-				+1.1
3,885,028	-				-0.1
3,885,028	-				+0.9
3,885,028	-				+0.2
3,885,098	-		OH686_18765	0.13	+0.2
3,885,098	-		OH686_18765	0.13	-0.8
3,885,208	+		OH686_18765	0.33	-0.5
3,885,209	-		OH686_18765	0.33	-0.1
3,885,261	+		OH686_18765	0.42	+0.1
3,885,261	+		OH686_18765	0.42	-0.3
3,885,261	+		OH686_18765	0.42	+1.5
3,885,261	+		OH686_18765	0.42	-0.3
3,885,261	+		OH686_18765	0.42	+0.1
3,885,261	+		OH686_18765	0.42	-1.3
3,885,261	+		OH686_18765	0.42	+0.1
3,885,261	+		OH686_18765	0.42	-0.2
3,885,261	+		OH686_18765	0.42	+0.1
3,885,261	+		OH686_18765	0.42	-0.1
3,885,261	+		OH686_18765	0.42	+0.7
3,885,261	+		OH686_18765	0.42	-1.0
3,885,261	+		OH686_18765	0.42	-0.8
3,885,261	+		OH686_18765	0.42	+0.2
3,885,262	-		OH686_18765	0.43	-0.5
3,885,262	-		OH686_18765	0.43	+1.4
3,885,262	-		OH686_18765	0.43	-0.8
3,885,262	-		OH686_18765	0.43	+0.7
3,885,262	-		OH686_18765	0.43	-1.3
3,885,262	-		OH686_18765	0.43	-0.6
3,885,262	-		OH686_18765	0.43	+0.1
3,885,262	-		OH686_18765	0.43	+0.4
3,885,262	-		OH686_18765	0.43	-1.3
3,885,262	-		OH686_18765	0.43	+0.7
3,885,319	-		OH686_18765	0.53	+0.7
3,885,319	-		OH686_18765	0.53	+0.3
3,885,319	-		OH686_18765	0.53	-0.4
3,885,319	-		OH686_18765	0.53	-1.3
3,885,372	+		OH686_18765	0.62	-0.1
3,885,372	+		OH686_18765	0.62	+0.5
3,885,372	+		OH686_18765	0.62	-0.0
3,885,372	+		OH686_18765	0.62	+0.3
3,885,372	+		OH686_18765	0.62	-0.2
3,885,474	+		OH686_18765	0.81	-0.2
3,885,474	+		OH686_18765	0.81	+0.5
3,885,474	+		OH686_18765	0.81	-0.7
3,885,474	+		OH686_18765	0.81	+0.1
3,885,474	+		OH686_18765	0.81	+1.4
3,885,474	+		OH686_18765	0.81	-0.6
3,885,475	-		OH686_18765	0.81	+1.0
3,885,475	-		OH686_18765	0.81	-0.2
3,885,475	-		OH686_18765	0.81	+0.8
3,885,475	-		OH686_18765	0.81	-0.1
3,885,561	+				-1.2
3,885,562	-				+0.4
3,885,640	+				-0.6
3,885,640	+				-0.1
3,885,640	+				-0.8
3,885,640	+				+0.2
3,885,641	-				-0.2
3,885,641	-				-0.2
3,885,641	-				-0.7
3,885,641	-				-0.7
3,885,658	+				+1.2
3,885,659	-				+1.3
3,885,673	+		OH686_18770	0.12	-0.1
3,885,673	+		OH686_18770	0.12	-0.2
3,885,674	-		OH686_18770	0.12	-0.7
3,885,674	-		OH686_18770	0.12	-1.4
3,885,674	-		OH686_18770	0.12	-0.4
3,885,674	-		OH686_18770	0.12	-0.7
3,885,674	-		OH686_18770	0.12	+1.7
3,885,702	+		OH686_18770	0.16	+0.2
3,885,703	-		OH686_18770	0.16	-0.2
3,885,703	-		OH686_18770	0.16	-0.0
3,885,703	-		OH686_18770	0.16	-1.0
3,885,733	+		OH686_18770	0.20	-0.0
3,885,859	+		OH686_18770	0.38	+0.2
3,885,967	+		OH686_18770	0.53	+0.1
3,885,968	-		OH686_18770	0.53	-0.1