Strain Fitness in Pseudomonas sp. S08-1 around OH686_18680

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
3,872,200	+		OH686_18675	0.46	+0.6
3,872,200	+		OH686_18675	0.46	+0.2
3,872,200	+		OH686_18675	0.46	-0.0
3,872,350	+		OH686_18675	0.56	-0.5
3,872,350	+		OH686_18675	0.56	-0.3
3,872,351	-		OH686_18675	0.56	+1.5
3,872,351	-		OH686_18675	0.56	+0.5
3,872,351	-		OH686_18675	0.56	+0.5
3,872,351	-		OH686_18675	0.56	+0.8
3,872,351	-		OH686_18675	0.56	+0.2
3,872,351	-		OH686_18675	0.56	-0.8
3,872,351	-		OH686_18675	0.56	-0.5
3,872,515	+		OH686_18675	0.67	+1.3
3,872,515	+		OH686_18675	0.67	-0.4
3,872,515	+		OH686_18675	0.67	-0.4
3,872,515	+		OH686_18675	0.67	+0.6
3,872,515	+		OH686_18675	0.67	+0.8
3,872,516	-		OH686_18675	0.67	-0.5
3,872,516	-		OH686_18675	0.67	-1.5
3,872,516	-		OH686_18675	0.67	-0.2
3,872,516	-		OH686_18675	0.67	+0.2
3,872,516	-		OH686_18675	0.67	+0.1
3,872,516	-		OH686_18675	0.67	+0.6
3,872,516	-		OH686_18675	0.67	+0.6
3,872,516	-		OH686_18675	0.67	-0.6
3,872,583	+		OH686_18675	0.71	+0.6
3,872,583	+		OH686_18675	0.71	-0.1
3,872,583	+		OH686_18675	0.71	+0.6
3,872,583	+		OH686_18675	0.71	-0.3
3,872,584	-		OH686_18675	0.71	+1.2
3,872,584	-		OH686_18675	0.71	+0.2
3,872,584	-		OH686_18675	0.71	+2.2
3,872,584	-		OH686_18675	0.71	+0.6
3,872,584	-		OH686_18675	0.71	-0.1
3,872,584	-		OH686_18675	0.71	+0.9
3,872,584	-		OH686_18675	0.71	-0.0
3,872,668	+		OH686_18675	0.76	-0.7
3,872,668	+		OH686_18675	0.76	+0.9
3,872,668	+		OH686_18675	0.76	-0.6
3,872,668	+		OH686_18675	0.76	+0.3
3,872,668	+		OH686_18675	0.76	+1.4
3,872,668	+		OH686_18675	0.76	+0.1
3,872,669	-		OH686_18675	0.76	-0.0
3,872,998	+				-0.6
3,872,998	+				-0.7
3,872,999	-				-1.0
3,873,017	+				-2.2
3,873,017	+				+0.6
3,873,017	+				+0.2
3,873,017	+				+0.5
3,873,018	-				+0.4
3,873,018	-				-0.1
3,873,018	-				+0.3
3,873,018	-				-1.3
3,873,018	-				+0.7
3,873,047	+				+0.8
3,873,047	+				-1.0
3,873,047	+				+0.0
3,873,047	+				+0.5
3,873,047	+				-0.3
3,873,047	+				+0.5
3,873,047	+				-1.2
3,873,047	+				+0.5
3,873,047	+				-0.3
3,873,047	+				-1.4
3,873,047	+				-1.8
3,873,047	+				-0.8
3,873,047	+				-0.5
3,873,048	-				-0.5
3,873,048	-				-1.6
3,873,048	-				+1.4
3,873,048	-				-1.4
3,873,048	-				-0.8
3,873,051	-				+0.3
3,873,051	-				-2.1
3,873,169	+				-0.3
3,873,169	+				-0.0
3,873,169	+				-0.6
3,873,169	+				-0.2
3,873,169	+				+0.2
3,873,169	+				+0.3
3,873,170	-				+0.2
3,873,170	-				+0.8
3,873,170	-				+0.2
3,873,170	-				+1.0
3,873,173	+				+1.4
3,873,173	+				+0.6
3,873,173	+				+0.0
3,873,173	+				-0.4
3,873,173	+				+1.5
3,873,173	+				-0.1
3,873,173	+				-1.0
3,873,173	+				-0.0
3,873,173	+				+1.0
3,873,173	+				-0.3
3,873,173	+				-1.1
3,873,173	+				+0.2
3,873,173	+				-0.4
3,873,174	-				+2.2
3,873,174	-				+1.3
3,873,174	-				-1.2
3,873,174	-				+0.1
3,873,174	-				+0.0
3,873,174	-				-0.4
3,873,174	-				-1.7
3,873,174	-				+0.2
3,873,174	-				-0.8
3,873,174	-				-0.2
3,873,174	-				+1.3
3,873,174	-				+1.5
3,873,174	-				+0.2
3,873,174	-				+0.2
3,873,174	-				-0.1
3,873,174	-				+0.1
3,873,174	-				+0.8
3,873,174	-				+0.2
3,873,174	-				+0.7
3,873,174	-				+0.2
3,873,174	-				-0.5
3,873,174	-				-0.2
3,873,174	-				+0.0
3,873,174	-				+0.4
3,873,174	-				-0.4
3,873,266	+		OH686_18680	0.17	-1.4
3,873,530	+		OH686_18680	0.63	+0.6
3,873,530	+		OH686_18680	0.63	-0.7
3,873,530	+		OH686_18680	0.63	+1.2
3,873,530	+		OH686_18680	0.63	+0.2
3,873,530	+		OH686_18680	0.63	+1.4
3,873,530	+		OH686_18680	0.63	+0.7
3,873,530	+		OH686_18680	0.63	+1.2
3,873,530	+		OH686_18680	0.63	-0.3
3,873,531	-		OH686_18680	0.64	+0.2
3,873,531	-		OH686_18680	0.64	-0.2
3,873,531	-		OH686_18680	0.64	-0.2
3,873,531	-		OH686_18680	0.64	-1.2
3,873,531	-		OH686_18680	0.64	+0.7
3,873,531	-		OH686_18680	0.64	-0.8
3,873,531	-		OH686_18680	0.64	-1.5
3,873,531	-		OH686_18680	0.64	-0.8
3,873,531	-		OH686_18680	0.64	-2.5
3,873,531	-		OH686_18680	0.64	+1.6
3,873,531	-		OH686_18680	0.64	-0.7
3,873,531	-		OH686_18680	0.64	+0.6
3,873,531	-		OH686_18680	0.64	+0.0
3,873,531	-		OH686_18680	0.64	+0.6
3,873,563	+		OH686_18680	0.69	-0.4
3,873,564	-		OH686_18680	0.70	+0.3
3,873,564	-		OH686_18680	0.70	-0.4
3,873,564	-		OH686_18680	0.70	-0.7
3,873,564	-		OH686_18680	0.70	-1.2
3,873,761	+				+1.8
3,873,761	+				-0.0
3,873,762	-				+0.5
3,873,762	-				-0.4
3,873,762	-				-0.4
3,873,778	+				+0.9
3,873,840	+				+0.8
3,873,840	+				+0.2
3,873,854	+				-1.7
3,873,854	+				+0.6
3,873,855	-				-0.5
3,873,855	-				-0.2
3,873,855	-				-0.4
3,873,872	+				+0.4
3,873,872	+				-1.5
3,873,872	+				-0.5
3,873,872	+				-1.3
3,873,872	+				+0.8
3,873,872	+				+0.5
3,873,872	+				+0.1
3,873,873	-				-0.2
3,873,928	+				+0.2
3,873,928	+				-0.1
3,873,928	+				+0.1
3,873,928	+				-0.0
3,873,928	+				-0.5
3,873,928	+				+0.6
3,873,928	+				-0.3
3,873,928	+				+1.3
3,873,929	-				-1.3
3,873,929	-				+0.1
3,873,929	-				+0.5
3,873,929	-				-0.1
3,873,929	-				+0.2
3,873,929	-				-0.4
3,873,929	-				+0.5
3,873,932	+				+1.0
3,873,932	+				-0.4
3,873,932	+				-0.3
3,873,932	+				-0.3
3,873,932	+				+0.6
3,873,932	+				-0.4
3,873,933	-				+0.2
3,873,933	-				-0.5
3,873,933	-				+0.0
3,873,933	-				-0.6
3,873,933	-				+0.1
3,873,933	-				-0.4
3,873,933	-				+0.4
3,873,933	-				-0.1
3,873,933	-				-0.0
3,873,933	-				-1.5
3,873,933	-				+0.3
3,873,933	-				-0.5
3,873,933	-				+1.1
3,873,980	+		OH686_18685	0.16	+0.2
3,873,981	-		OH686_18685	0.17	-0.2
3,873,981	-		OH686_18685	0.17	+0.6
3,874,023	+		OH686_18685	0.23	-0.1
3,874,024	-		OH686_18685	0.24	+0.3
3,874,127	+		OH686_18685	0.41	-0.8
3,874,127	+		OH686_18685	0.41	+1.2
3,874,473	+				+0.3
3,874,473	+				+0.6
3,874,473	+				+1.1
3,874,473	+				+0.3
3,874,473	+				-1.4
3,874,474	-				+0.1
3,874,474	-				-0.3
3,874,518	+				-0.1
3,874,518	+				+0.4
3,874,519	-				-0.4
3,874,614	+				+0.4
3,874,615	-				+0.9
3,874,684	-				-0.9