Strain Fitness in Pseudomonas sp. S08-1 around OH686_18575

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
3,854,119	-				-0.8
3,854,119	-				-1.0
3,854,119	-				-1.1
3,854,158	+				-0.6
3,854,159	-				+0.6
3,854,159	-				-1.2
3,854,159	-				-1.5
3,854,159	-				+0.6
3,854,159	-				-0.2
3,854,159	-				-0.1
3,854,161	+				-1.4
3,854,161	+				-0.2
3,854,161	+				-1.1
3,854,161	+				-0.4
3,854,161	+				+0.9
3,854,161	+				+0.1
3,854,162	-				-0.9
3,854,162	-				-0.2
3,854,162	-				+0.4
3,854,162	-				-0.8
3,854,162	-				+0.6
3,854,202	+				+0.1
3,854,233	+				-0.1
3,854,233	+				+0.6
3,854,233	+				-0.7
3,854,234	-				+0.1
3,854,234	-				+0.0
3,854,322	-		OH686_18570	0.11	-0.7
3,854,397	+		OH686_18570	0.20	+1.5
3,854,397	+		OH686_18570	0.20	+0.0
3,854,397	+		OH686_18570	0.20	-0.3
3,854,397	+		OH686_18570	0.20	-1.0
3,854,574	+		OH686_18570	0.41	+0.4
3,854,574	+		OH686_18570	0.41	-0.5
3,854,574	+		OH686_18570	0.41	+0.6
3,854,574	+		OH686_18570	0.41	+0.2
3,854,574	+		OH686_18570	0.41	-0.5
3,854,575	-		OH686_18570	0.41	+0.7
3,854,575	-		OH686_18570	0.41	+2.1
3,854,828	-		OH686_18570	0.72	-0.0
3,854,888	+		OH686_18570	0.79	-0.7
3,854,888	+		OH686_18570	0.79	+0.4
3,854,888	+		OH686_18570	0.79	-0.8
3,854,888	+		OH686_18570	0.79	+0.2
3,854,889	-		OH686_18570	0.79	-0.5
3,854,889	-		OH686_18570	0.79	+1.0
3,854,889	-		OH686_18570	0.79	-0.9
3,855,015	+				-0.8
3,855,015	+				-0.7
3,855,015	+				+0.2
3,855,016	-				-0.9
3,855,059	+				-0.0
3,855,059	+				+0.4
3,855,060	-				+0.4
3,855,120	+				+0.4
3,855,120	+				+0.5
3,855,120	+				-0.4
3,855,120	+				+0.1
3,855,120	+				-0.7
3,855,120	+				-0.2
3,855,120	+				-0.9
3,855,120	+				-1.2
3,855,120	+				-0.6
3,855,120	+				+0.5
3,855,121	-				+0.7
3,855,121	-				+0.6
3,855,121	-				+0.3
3,855,121	-				-0.0
3,855,121	-				-0.7
3,855,121	-				+0.5
3,855,121	-				+1.9
3,855,121	-				-0.8
3,855,121	-				+0.4
3,855,121	-				-0.4
3,855,121	-				+0.1
3,855,121	-				+0.5
3,855,189	-				+0.1
3,855,196	+				-0.3
3,855,197	-				-0.0
3,855,219	+		OH686_18575	0.11	-0.2
3,855,320	+		OH686_18575	0.23	-0.0
3,855,321	-		OH686_18575	0.23	-2.3
3,855,405	+		OH686_18575	0.32	-0.5
3,855,405	+		OH686_18575	0.32	+0.0
3,855,405	+		OH686_18575	0.32	+0.6
3,855,405	+		OH686_18575	0.32	-1.7
3,855,406	-		OH686_18575	0.32	+0.5
3,855,406	-		OH686_18575	0.32	+0.7
3,855,406	-		OH686_18575	0.32	-1.6
3,855,486	+		OH686_18575	0.41	-0.8
3,855,486	+		OH686_18575	0.41	-0.0
3,855,486	+		OH686_18575	0.41	-0.5
3,855,487	-		OH686_18575	0.42	-2.3
3,855,487	-		OH686_18575	0.42	-0.2
3,855,501	+		OH686_18575	0.43	-0.5
3,855,501	+		OH686_18575	0.43	-0.4
3,855,501	+		OH686_18575	0.43	-0.9
3,855,501	+		OH686_18575	0.43	-0.5
3,855,501	+		OH686_18575	0.43	+1.4
3,855,501	+		OH686_18575	0.43	-1.0
3,855,501	+		OH686_18575	0.43	+0.1
3,855,502	-		OH686_18575	0.43	+0.2
3,855,502	-		OH686_18575	0.43	-1.0
3,855,502	-		OH686_18575	0.43	-0.5
3,855,502	-		OH686_18575	0.43	-0.4
3,855,677	+		OH686_18575	0.63	-0.2
3,855,694	-		OH686_18575	0.65	+0.1
3,855,801	+		OH686_18575	0.77	-0.9
3,855,801	+		OH686_18575	0.77	-0.4
3,855,801	+		OH686_18575	0.77	+1.4
3,855,801	+		OH686_18575	0.77	-0.2
3,855,802	-		OH686_18575	0.77	-0.3
3,855,802	-		OH686_18575	0.77	-0.5
3,855,802	-		OH686_18575	0.77	-1.1
3,855,802	-		OH686_18575	0.77	+0.5
3,855,802	-		OH686_18575	0.77	-0.7
3,855,802	-		OH686_18575	0.77	-0.0
3,855,870	+		OH686_18575	0.85	-0.7
3,855,870	+		OH686_18575	0.85	+0.8
3,855,870	+		OH686_18575	0.85	+0.2
3,855,870	+		OH686_18575	0.85	+0.3
3,855,870	+		OH686_18575	0.85	-1.0
3,855,870	+		OH686_18575	0.85	-0.5
3,855,871	-		OH686_18575	0.85	-0.5
3,855,871	-		OH686_18575	0.85	-0.4
3,855,871	-		OH686_18575	0.85	-0.9
3,856,075	+				-0.0
3,856,075	+				-0.3
3,856,075	+				-0.3
3,856,075	+				+1.1
3,856,076	-				-0.3
3,856,076	-				-0.0
3,856,076	-				+1.1
3,856,097	+				+1.1
3,856,417	+		OH686_18580	0.30	-0.4
3,856,417	+		OH686_18580	0.30	-0.4
3,856,417	+		OH686_18580	0.30	-0.1
3,856,417	+		OH686_18580	0.30	-0.1
3,856,418	-		OH686_18580	0.30	-0.7
3,856,418	-		OH686_18580	0.30	+0.4
3,856,418	-		OH686_18580	0.30	-0.2
3,856,500	+		OH686_18580	0.39	-0.9
3,856,500	+		OH686_18580	0.39	-0.8
3,856,500	+		OH686_18580	0.39	+1.1
3,856,500	+		OH686_18580	0.39	-0.0
3,856,500	+		OH686_18580	0.39	-0.2
3,856,500	+		OH686_18580	0.39	-0.1
3,856,501	-		OH686_18580	0.39	+0.1
3,856,630	+		OH686_18580	0.52	-0.7
3,856,630	+		OH686_18580	0.52	-0.4
3,856,631	-		OH686_18580	0.52	-1.2
3,856,631	-		OH686_18580	0.52	-0.4
3,856,631	-		OH686_18580	0.52	-0.7
3,856,717	+		OH686_18580	0.61	-0.4
3,856,717	+		OH686_18580	0.61	-0.0
3,856,717	+		OH686_18580	0.61	-0.4
3,856,717	+		OH686_18580	0.61	-1.0
3,856,717	+		OH686_18580	0.61	-0.0
3,856,717	+		OH686_18580	0.61	+0.3
3,856,717	+		OH686_18580	0.61	-0.6
3,856,717	+		OH686_18580	0.61	+0.0
3,856,717	+		OH686_18580	0.61	-0.9
3,856,717	+		OH686_18580	0.61	-1.4
3,856,718	-		OH686_18580	0.61	-0.4
3,856,718	-		OH686_18580	0.61	-0.3
3,856,718	-		OH686_18580	0.61	+0.0
3,856,718	-		OH686_18580	0.61	-0.5
3,856,718	-		OH686_18580	0.61	+2.3
3,856,718	-		OH686_18580	0.61	+0.0
3,856,729	+		OH686_18580	0.62	+0.5
3,856,729	+		OH686_18580	0.62	+0.1
3,856,729	+		OH686_18580	0.62	-0.1
3,856,730	-		OH686_18580	0.62	-1.9
3,856,730	-		OH686_18580	0.62	-0.2
3,856,730	-		OH686_18580	0.62	-1.2
3,856,730	-		OH686_18580	0.62	-0.5
3,856,730	-		OH686_18580	0.62	+1.7
3,856,759	+		OH686_18580	0.65	-0.4
3,856,759	+		OH686_18580	0.65	-0.5
3,856,760	-		OH686_18580	0.65	+0.3
3,856,760	-		OH686_18580	0.65	+1.3
3,856,813	+		OH686_18580	0.70	+0.8
3,856,813	+		OH686_18580	0.70	+0.5
3,856,813	+		OH686_18580	0.70	+0.4
3,856,813	+		OH686_18580	0.70	-0.5
3,856,814	-		OH686_18580	0.70	-0.4
3,856,814	-		OH686_18580	0.70	+0.0
3,856,814	-		OH686_18580	0.70	+0.9
3,856,814	-		OH686_18580	0.70	-1.8
3,856,816	-		OH686_18580	0.71	+0.0
3,856,816	-		OH686_18580	0.71	-0.3
3,856,816	-		OH686_18580	0.71	+0.1
3,856,826	+		OH686_18580	0.72	+0.1
3,856,826	+		OH686_18580	0.72	-1.2
3,856,826	+		OH686_18580	0.72	+0.4
3,856,826	+		OH686_18580	0.72	+0.2
3,856,826	+		OH686_18580	0.72	-1.1
3,856,826	+		OH686_18580	0.72	-0.1
3,856,826	+		OH686_18580	0.72	+0.3
3,856,826	+		OH686_18580	0.72	-0.8
3,856,826	+		OH686_18580	0.72	-0.6
3,856,826	+		OH686_18580	0.72	+1.7
3,856,826	+		OH686_18580	0.72	-2.2
3,856,826	+		OH686_18580	0.72	-0.2
3,856,827	-		OH686_18580	0.72	-0.0
3,856,827	-		OH686_18580	0.72	+0.2
3,856,827	-		OH686_18580	0.72	+0.6
3,856,827	-		OH686_18580	0.72	+1.4
3,856,827	-		OH686_18580	0.72	-1.7
3,856,827	-		OH686_18580	0.72	-0.1
3,856,827	-		OH686_18580	0.72	+0.3
3,856,827	-		OH686_18580	0.72	-0.3
3,856,827	-		OH686_18580	0.72	+0.6
3,856,827	-		OH686_18580	0.72	-0.4
3,856,827	-		OH686_18580	0.72	+0.3
3,856,888	+		OH686_18580	0.78	+1.1
3,856,888	+		OH686_18580	0.78	-0.3
3,856,888	+		OH686_18580	0.78	-0.3
3,856,888	+		OH686_18580	0.78	+0.6
3,856,888	+		OH686_18580	0.78	-0.3
3,856,889	-		OH686_18580	0.78	+0.1
3,856,889	-		OH686_18580	0.78	+0.5
3,856,889	-		OH686_18580	0.78	+0.1
3,856,889	-		OH686_18580	0.78	-0.9
3,856,889	-		OH686_18580	0.78	+0.3
3,856,889	-		OH686_18580	0.78	+0.2