Strain Fitness in Pseudomonas sp. S08-1 around OH686_17910

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
3,732,322	+		OH686_17905	0.50	-0.3
3,732,366	-		OH686_17905	0.53	-0.9
3,732,450	+		OH686_17905	0.59	+1.4
3,732,450	+		OH686_17905	0.59	-0.6
3,732,450	+		OH686_17905	0.59	-0.4
3,732,450	+		OH686_17905	0.59	+0.2
3,732,450	+		OH686_17905	0.59	-0.4
3,732,450	+		OH686_17905	0.59	+0.6
3,732,451	-		OH686_17905	0.59	-0.2
3,732,451	-		OH686_17905	0.59	+0.5
3,732,451	-		OH686_17905	0.59	-0.9
3,732,451	-		OH686_17905	0.59	+1.1
3,732,451	-		OH686_17905	0.59	-0.2
3,732,604	+		OH686_17905	0.70	-1.3
3,732,605	-		OH686_17905	0.70	-0.6
3,732,605	-		OH686_17905	0.70	-0.4
3,733,094	+				+0.5
3,733,094	+				+0.1
3,733,094	+				-0.2
3,733,094	+				+0.1
3,733,094	+				-0.6
3,733,094	+				+0.1
3,733,095	-				-0.3
3,733,095	-				-0.1
3,733,157	+				+0.2
3,733,157	+				+0.6
3,733,157	+				-0.2
3,733,157	+				-1.7
3,733,157	+				+0.7
3,733,157	+				-0.2
3,733,157	+				+1.1
3,733,157	+				+0.2
3,733,157	+				+0.4
3,733,157	+				+0.3
3,733,158	-				+0.6
3,733,158	-				-0.1
3,733,158	-				-0.7
3,733,162	+				+1.0
3,733,163	-				-0.2
3,733,163	-				+1.3
3,733,163	-				-0.1
3,733,176	+				-0.4
3,733,177	-				+1.4
3,733,177	-				+0.1
3,733,177	-				+0.0
3,733,177	-				+1.3
3,733,177	-				-0.1
3,733,177	-				+0.0
3,733,177	-				-0.2
3,733,177	-				+0.1
3,733,298	+		OH686_17910	0.17	+0.5
3,733,298	+		OH686_17910	0.17	-0.8
3,733,298	+		OH686_17910	0.17	-0.1
3,733,298	+		OH686_17910	0.17	-0.2
3,733,299	-		OH686_17910	0.17	-0.4
3,733,299	-		OH686_17910	0.17	+0.0
3,733,299	-		OH686_17910	0.17	-0.4
3,733,299	-		OH686_17910	0.17	+0.7
3,733,299	-		OH686_17910	0.17	-0.8
3,733,299	-		OH686_17910	0.17	+0.5
3,733,299	-		OH686_17910	0.17	-0.6
3,733,299	-		OH686_17910	0.17	-0.2
3,733,796	+		OH686_17910	0.59	-0.6
3,733,796	+		OH686_17910	0.59	+0.1
3,733,797	-		OH686_17910	0.59	-0.1
3,733,797	-		OH686_17910	0.59	-0.6
3,733,797	-		OH686_17910	0.59	-0.4
3,733,797	-		OH686_17910	0.59	+0.1
3,733,838	+		OH686_17910	0.63	+0.5
3,733,838	+		OH686_17910	0.63	+0.9
3,733,838	+		OH686_17910	0.63	+1.1
3,733,838	+		OH686_17910	0.63	+0.1
3,733,838	+		OH686_17910	0.63	-0.3
3,733,838	+		OH686_17910	0.63	+0.6
3,733,838	+		OH686_17910	0.63	-0.9
3,733,838	+		OH686_17910	0.63	+1.1
3,733,838	+		OH686_17910	0.63	+0.8
3,733,838	+		OH686_17910	0.63	+0.5
3,733,838	+		OH686_17910	0.63	-1.3
3,733,838	+		OH686_17910	0.63	+0.2
3,733,838	+		OH686_17910	0.63	+0.8
3,733,838	+		OH686_17910	0.63	+1.1
3,733,838	+		OH686_17910	0.63	-1.0
3,733,838	+		OH686_17910	0.63	-0.5
3,733,838	+		OH686_17910	0.63	-0.7
3,733,838	+		OH686_17910	0.63	-0.4
3,733,838	+		OH686_17910	0.63	-0.0
3,733,838	+		OH686_17910	0.63	-0.4
3,733,838	+		OH686_17910	0.63	-0.5
3,733,838	+		OH686_17910	0.63	-0.3
3,733,838	+		OH686_17910	0.63	-1.0
3,733,839	-		OH686_17910	0.63	-0.1
3,733,839	-		OH686_17910	0.63	-0.4
3,733,839	-		OH686_17910	0.63	-0.0
3,733,839	-		OH686_17910	0.63	-0.1
3,733,839	-		OH686_17910	0.63	+0.1
3,733,839	-		OH686_17910	0.63	-0.1
3,733,839	-		OH686_17910	0.63	-0.1
3,733,839	-		OH686_17910	0.63	-0.2
3,733,839	-		OH686_17910	0.63	+1.3
3,733,839	-		OH686_17910	0.63	-0.3
3,733,839	-		OH686_17910	0.63	-0.4
3,733,839	-		OH686_17910	0.63	+0.3
3,733,839	-		OH686_17910	0.63	-0.4
3,733,839	-		OH686_17910	0.63	+0.6
3,733,839	-		OH686_17910	0.63	-0.5
3,733,839	-		OH686_17910	0.63	+1.1
3,733,839	-		OH686_17910	0.63	+1.0
3,733,839	-		OH686_17910	0.63	+0.9
3,733,839	-		OH686_17910	0.63	+0.5
3,733,874	+		OH686_17910	0.66	-0.1
3,733,875	-		OH686_17910	0.66	+0.2
3,734,304	+				-1.0
3,734,305	-				-0.6
3,734,451	+		OH686_17915	0.33	-0.2
3,734,451	+		OH686_17915	0.33	-0.6
3,734,452	-		OH686_17915	0.34	+0.0
3,734,486	+		OH686_17915	0.41	-0.8
3,734,529	+		OH686_17915	0.51	-0.6
3,734,529	+		OH686_17915	0.51	-1.6
3,734,530	-		OH686_17915	0.51	-0.2
3,734,530	-		OH686_17915	0.51	-0.1
3,734,530	-		OH686_17915	0.51	+0.5
3,734,530	-		OH686_17915	0.51	+1.3
3,734,530	-		OH686_17915	0.51	+0.3
3,734,604	+		OH686_17915	0.69	+0.3
3,734,604	+		OH686_17915	0.69	+0.1
3,734,604	+		OH686_17915	0.69	-0.3
3,734,604	+		OH686_17915	0.69	-1.9
3,734,604	+		OH686_17915	0.69	-0.4
3,734,604	+		OH686_17915	0.69	-0.6
3,734,604	+		OH686_17915	0.69	+0.5
3,734,604	+		OH686_17915	0.69	-0.2
3,734,604	+		OH686_17915	0.69	-0.5
3,734,604	+		OH686_17915	0.69	-0.9
3,734,604	+		OH686_17915	0.69	-0.1
3,734,604	+		OH686_17915	0.69	-0.2
3,734,604	+		OH686_17915	0.69	-1.0
3,734,604	+		OH686_17915	0.69	-0.7
3,734,605	-		OH686_17915	0.69	-0.9
3,734,605	-		OH686_17915	0.69	+0.1
3,734,605	-		OH686_17915	0.69	-1.0
3,734,605	-		OH686_17915	0.69	+0.2
3,734,605	-		OH686_17915	0.69	-0.2
3,734,605	-		OH686_17915	0.69	-1.3
3,734,605	-		OH686_17915	0.69	+0.4
3,734,605	-		OH686_17915	0.69	-0.4
3,734,605	-		OH686_17915	0.69	-0.2
3,734,605	-		OH686_17915	0.69	-0.1
3,734,605	-		OH686_17915	0.69	-0.8
3,734,605	-		OH686_17915	0.69	+0.5
3,734,605	-		OH686_17915	0.69	+1.1
3,734,605	-		OH686_17915	0.69	+0.8
3,734,605	-		OH686_17915	0.69	-1.0
3,734,634	+		OH686_17915	0.75	-0.1
3,734,637	+		OH686_17915	0.76	-0.4
3,734,638	-		OH686_17915	0.76	+1.3
3,734,638	-		OH686_17915	0.76	-0.3
3,734,638	-		OH686_17915	0.76	-0.0
3,734,661	+		OH686_17915	0.82	+0.4
3,734,709	+				+1.0
3,734,710	-				-0.2
3,734,710	-				-1.4
3,734,770	-				-2.9
3,734,792	+				-0.3
3,734,811	+				+0.8
3,734,811	+				+1.1
3,734,811	+				+1.1
3,734,811	+				-0.6
3,734,812	-				-0.2
3,734,812	-				+0.6
3,734,812	-				-1.5
3,734,812	-				+0.3
3,734,812	-				-0.7
3,734,812	-				+0.6
3,734,812	-				+0.1
3,734,812	-				-0.2
3,734,812	-				-0.6
3,734,812	-				+0.2
3,734,821	+				-0.5
3,734,821	+				+0.0
3,734,822	-				-0.6
3,734,822	-				+0.6
3,734,822	-				-0.3
3,734,878	+				+1.8
3,734,878	+				-0.8
3,734,878	+				-0.1
3,734,878	+				+0.6
3,734,878	+				-0.3
3,734,878	+				+0.4
3,734,878	+				+0.8
3,734,878	+				-0.0
3,734,878	+				-0.4
3,734,878	+				+0.5
3,734,879	-				-0.3
3,734,879	-				-0.9
3,734,879	-				-0.5
3,734,879	-				-0.2
3,734,879	-				+1.0
3,734,879	-				+0.3
3,734,885	+				-1.0
3,734,885	+				-0.2
3,734,886	-				+0.1
3,734,886	-				-0.5
3,734,915	+				+0.9
3,734,916	-				+0.6
3,734,942	+				+0.9
3,734,942	+				-0.8
3,734,942	+				+0.5
3,734,942	+				+0.3
3,734,942	+				+1.1
3,734,942	+				+0.7
3,734,942	+				-0.6
3,734,943	-				-1.5
3,734,943	-				+0.1
3,734,943	-				-0.5
3,734,943	-				-0.2
3,734,943	-				+1.2
3,734,943	-				+1.3
3,734,943	-				-1.2
3,734,943	-				+0.2
3,734,943	-				+0.4
3,734,949	+				-0.4
3,734,950	-				+1.0
3,735,204	+		OH686_17920	0.22	-0.0
3,735,204	+		OH686_17920	0.22	+0.4
3,735,204	+		OH686_17920	0.22	-0.4
3,735,204	+		OH686_17920	0.22	-0.4
3,735,262	+		OH686_17920	0.27	+0.1