Strain Fitness in Pseudomonas sp. S08-1 around OH686_16245

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
3,399,858	+		OH686_16240	0.44	-0.6
3,399,858	+		OH686_16240	0.44	-1.0
3,399,858	+		OH686_16240	0.44	+1.0
3,399,858	+		OH686_16240	0.44	-0.5
3,399,858	+		OH686_16240	0.44	+0.1
3,399,858	+		OH686_16240	0.44	-0.0
3,399,858	+		OH686_16240	0.44	+1.4
3,399,858	+		OH686_16240	0.44	+0.1
3,399,858	+		OH686_16240	0.44	+0.3
3,399,859	-		OH686_16240	0.44	+0.6
3,399,859	-		OH686_16240	0.44	-1.1
3,399,859	-		OH686_16240	0.44	+0.0
3,399,859	-		OH686_16240	0.44	-2.0
3,399,859	-		OH686_16240	0.44	-0.7
3,399,859	-		OH686_16240	0.44	+1.2
3,400,062	+		OH686_16240	0.56	-1.4
3,400,062	+		OH686_16240	0.56	+0.7
3,400,062	+		OH686_16240	0.56	-0.6
3,400,062	+		OH686_16240	0.56	+0.5
3,400,063	-		OH686_16240	0.56	+0.1
3,400,063	-		OH686_16240	0.56	+0.4
3,400,063	-		OH686_16240	0.56	+0.1
3,400,063	-		OH686_16240	0.56	+0.3
3,400,063	-		OH686_16240	0.56	-0.1
3,400,063	-		OH686_16240	0.56	+0.9
3,400,063	-		OH686_16240	0.56	+1.4
3,400,063	-		OH686_16240	0.56	+0.0
3,400,063	-		OH686_16240	0.56	+0.9
3,400,125	+		OH686_16240	0.60	+0.6
3,400,125	+		OH686_16240	0.60	-0.8
3,400,211	+		OH686_16240	0.65	-2.3
3,400,386	+		OH686_16240	0.75	-0.4
3,400,386	+		OH686_16240	0.75	+0.7
3,400,386	+		OH686_16240	0.75	+0.8
3,400,386	+		OH686_16240	0.75	+1.2
3,400,386	+		OH686_16240	0.75	+0.1
3,400,386	+		OH686_16240	0.75	+0.6
3,400,386	+		OH686_16240	0.75	+0.2
3,400,386	+		OH686_16240	0.75	-1.1
3,400,386	+		OH686_16240	0.75	-0.7
3,400,386	+		OH686_16240	0.75	-0.4
3,400,386	+		OH686_16240	0.75	-1.3
3,400,386	+		OH686_16240	0.75	-1.2
3,400,387	-		OH686_16240	0.75	+0.0
3,400,387	-		OH686_16240	0.75	+0.4
3,400,387	-		OH686_16240	0.75	-0.5
3,400,387	-		OH686_16240	0.75	-0.7
3,400,387	-		OH686_16240	0.75	-0.0
3,400,387	-		OH686_16240	0.75	+0.4
3,400,387	-		OH686_16240	0.75	-0.8
3,400,387	-		OH686_16240	0.75	+0.6
3,400,387	-		OH686_16240	0.75	-0.1
3,400,387	-		OH686_16240	0.75	+0.4
3,400,387	-		OH686_16240	0.75	-0.1
3,400,408	-		OH686_16240	0.77	-0.6
3,400,408	-		OH686_16240	0.77	+0.6
3,400,668	+				+0.1
3,400,668	+				+1.3
3,400,669	-				-0.3
3,400,707	+				-0.8
3,400,707	+				-0.8
3,400,707	+				+0.4
3,400,707	+				+0.8
3,400,707	+				+0.7
3,400,707	+				+0.7
3,400,707	+				-1.4
3,400,707	+				-0.5
3,400,707	+				-0.4
3,400,708	-				-1.7
3,400,708	-				-0.4
3,400,708	-				-0.3
3,400,708	-				+0.3
3,400,708	-				-0.4
3,400,708	-				-1.3
3,400,708	-				+0.2
3,400,708	-				+0.0
3,400,708	-				+0.1
3,400,708	-				+0.7
3,400,708	-				+0.3
3,400,708	-				-1.1
3,400,716	+				+0.6
3,400,716	+				+0.7
3,400,716	+				-1.0
3,400,716	+				+0.9
3,400,716	+				-0.5
3,400,717	-				-1.0
3,400,776	+				-0.6
3,400,776	+				-0.2
3,400,776	+				-0.5
3,400,776	+				-0.5
3,400,777	-				+0.6
3,400,777	-				+0.4
3,400,777	-				-2.3
3,400,794	+				+0.3
3,400,794	+				+0.6
3,400,794	+				+0.5
3,400,794	+				-1.4
3,400,794	+				-0.1
3,400,795	-				+0.3
3,400,795	-				-1.1
3,400,860	+				-0.3
3,400,860	+				-0.1
3,400,860	+				-0.3
3,400,860	+				-0.7
3,400,861	-				+0.6
3,400,872	+				+0.7
3,400,873	-				-2.1
3,400,873	-				-0.3
3,400,873	-				+0.5
3,401,030	-		OH686_16245	0.40	-0.3
3,401,137	-		OH686_16245	0.62	-1.5
3,401,354	+				-0.4
3,401,354	+				-1.0
3,401,355	-				+0.4
3,401,355	-				+0.5
3,401,355	-				+1.7
3,401,355	-				+0.8
3,401,371	+				-2.0
3,401,371	+				+0.6
3,401,371	+				+0.1
3,401,371	+				+0.2
3,401,372	-				-0.5
3,401,372	-				+1.0
3,401,372	-				-0.6
3,401,372	-				-0.4
3,401,372	-				+0.2
3,401,372	-				-1.2
3,401,372	-				-0.6
3,401,372	-				-0.1
3,401,372	-				+0.6
3,401,372	-				-0.8
3,401,372	-				-0.1
3,401,372	-				+0.1
3,401,427	+				+0.1
3,401,427	+				+0.3
3,401,427	+				-0.4
3,401,427	+				+0.6
3,401,427	+				+0.1
3,401,427	+				+0.6
3,401,427	+				+0.2
3,401,428	-				+0.2
3,401,428	-				+0.2
3,401,428	-				-0.2
3,401,428	-				+1.2
3,401,428	-				+1.2
3,401,428	-				-1.1
3,401,428	-				-0.4
3,401,602	+		OH686_16250	0.22	+0.4
3,401,602	+		OH686_16250	0.22	+0.6
3,401,603	-		OH686_16250	0.22	-0.0
3,401,603	-		OH686_16250	0.22	+1.9
3,401,718	+		OH686_16250	0.31	+1.1
3,401,718	+		OH686_16250	0.31	-0.8
3,401,718	+		OH686_16250	0.31	-0.0
3,401,718	+		OH686_16250	0.31	+0.3
3,401,718	+		OH686_16250	0.31	+0.7
3,401,718	+		OH686_16250	0.31	+0.5
3,401,718	+		OH686_16250	0.31	-0.1
3,401,718	+		OH686_16250	0.31	+0.1
3,401,718	+		OH686_16250	0.31	-0.8
3,401,718	+		OH686_16250	0.31	-0.4
3,401,718	+		OH686_16250	0.31	+0.6
3,401,718	+		OH686_16250	0.31	-0.1
3,401,718	+		OH686_16250	0.31	-1.0
3,401,718	+		OH686_16250	0.31	+0.4
3,401,718	+		OH686_16250	0.31	-0.2
3,401,718	+		OH686_16250	0.31	+1.1
3,401,718	+		OH686_16250	0.31	+0.2
3,401,718	+		OH686_16250	0.31	-0.3
3,401,719	-		OH686_16250	0.31	-0.0
3,401,719	-		OH686_16250	0.31	+0.6
3,401,719	-		OH686_16250	0.31	+0.6
3,401,719	-		OH686_16250	0.31	+0.6
3,401,719	-		OH686_16250	0.31	-0.1
3,401,719	-		OH686_16250	0.31	-0.6
3,401,719	-		OH686_16250	0.31	+0.8
3,401,719	-		OH686_16250	0.31	-1.3
3,401,719	-		OH686_16250	0.31	-1.1
3,401,719	-		OH686_16250	0.31	-0.4
3,401,719	-		OH686_16250	0.31	+0.9
3,401,719	-		OH686_16250	0.31	-0.1
3,401,719	-		OH686_16250	0.31	+0.4
3,401,719	-		OH686_16250	0.31	-0.4
3,401,829	+		OH686_16250	0.40	+0.1
3,401,829	+		OH686_16250	0.40	-0.2
3,401,830	-		OH686_16250	0.40	+0.7
3,401,830	-		OH686_16250	0.40	+0.1
3,401,830	-		OH686_16250	0.40	-1.1
3,401,830	-		OH686_16250	0.40	-0.6
3,401,830	-		OH686_16250	0.40	-0.4
3,401,830	-		OH686_16250	0.40	-1.1
3,401,859	+		OH686_16250	0.43	+2.2
3,401,859	+		OH686_16250	0.43	+0.4
3,401,859	+		OH686_16250	0.43	-0.3
3,401,859	+		OH686_16250	0.43	-0.0
3,401,859	+		OH686_16250	0.43	-1.2
3,401,859	+		OH686_16250	0.43	-0.9
3,401,860	-		OH686_16250	0.43	+1.0
3,401,860	-		OH686_16250	0.43	+1.2
3,401,860	-		OH686_16250	0.43	+0.5
3,401,860	-		OH686_16250	0.43	-0.4
3,401,860	-		OH686_16250	0.43	-0.7
3,401,860	-		OH686_16250	0.43	+0.5
3,401,860	-		OH686_16250	0.43	+0.2
3,401,860	-		OH686_16250	0.43	-0.0
3,401,860	-		OH686_16250	0.43	+0.0
3,401,860	-		OH686_16250	0.43	-0.4
3,401,860	-		OH686_16250	0.43	+0.4
3,401,892	+		OH686_16250	0.45	-0.7
3,401,892	+		OH686_16250	0.45	+0.4
3,401,893	-		OH686_16250	0.45	-1.0
3,401,893	-		OH686_16250	0.45	+0.2
3,401,893	-		OH686_16250	0.45	+0.3
3,401,893	-		OH686_16250	0.45	+0.9
3,402,111	+		OH686_16250	0.63	-0.6
3,402,111	+		OH686_16250	0.63	-0.8
3,402,111	+		OH686_16250	0.63	+0.7
3,402,112	-		OH686_16250	0.63	-0.2
3,402,112	-		OH686_16250	0.63	-0.0
3,402,112	-		OH686_16250	0.63	-0.4
3,402,112	-		OH686_16250	0.63	+0.3