Strain Fitness in Pseudomonas sp. S08-1 around OH686_15870

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
3,309,692	+		OH686_15860	0.79	+0.7
3,309,693	-		OH686_15860	0.79	-1.3
3,309,693	-		OH686_15860	0.79	+0.6
3,309,693	-		OH686_15860	0.79	+0.8
3,309,693	-		OH686_15860	0.79	-0.4
3,309,693	-		OH686_15860	0.79	-0.1
3,309,857	+				+0.3
3,309,857	+				+0.9
3,309,857	+				-1.1
3,309,857	+				+1.0
3,309,857	+				+0.6
3,309,857	+				+0.7
3,309,858	-				-1.2
3,309,858	-				+1.3
3,309,858	-				+0.2
3,309,897	+				+1.2
3,309,897	+				+0.2
3,309,897	+				-0.3
3,309,897	+				-0.6
3,309,897	+				-0.6
3,309,897	+				-0.3
3,309,897	+				+1.0
3,309,897	+				-0.8
3,309,897	+				-0.6
3,309,897	+				-0.1
3,309,897	+				-0.0
3,309,898	-				+0.2
3,309,898	-				+0.2
3,309,898	-				+0.3
3,309,898	-				-0.3
3,309,898	-				+0.5
3,309,898	-				+0.9
3,309,898	-				+1.3
3,310,087	+		OH686_15865	0.25	+0.1
3,310,087	+		OH686_15865	0.25	-0.0
3,310,088	-		OH686_15865	0.25	+0.2
3,310,114	+		OH686_15865	0.28	-0.6
3,310,114	+		OH686_15865	0.28	-1.4
3,310,114	+		OH686_15865	0.28	+1.7
3,310,114	+		OH686_15865	0.28	-1.9
3,310,115	-		OH686_15865	0.28	+0.5
3,310,115	-		OH686_15865	0.28	-0.8
3,310,115	-		OH686_15865	0.28	-2.0
3,310,165	+		OH686_15865	0.35	+0.3
3,310,165	+		OH686_15865	0.35	-0.5
3,310,165	+		OH686_15865	0.35	-0.8
3,310,166	-		OH686_15865	0.35	+0.6
3,310,204	+		OH686_15865	0.40	-0.9
3,310,204	+		OH686_15865	0.40	-0.8
3,310,204	+		OH686_15865	0.40	-0.8
3,310,204	+		OH686_15865	0.40	-2.1
3,310,204	+		OH686_15865	0.40	+0.8
3,310,204	+		OH686_15865	0.40	-0.2
3,310,204	+		OH686_15865	0.40	+0.3
3,310,205	-		OH686_15865	0.40	+0.5
3,310,315	+		OH686_15865	0.54	-1.7
3,310,321	+		OH686_15865	0.55	-1.5
3,310,321	+		OH686_15865	0.55	+0.5
3,310,322	-		OH686_15865	0.55	+0.2
3,310,322	-		OH686_15865	0.55	+1.5
3,310,322	-		OH686_15865	0.55	+1.4
3,310,322	-		OH686_15865	0.55	-2.1
3,310,322	-		OH686_15865	0.55	+0.5
3,310,322	-		OH686_15865	0.55	-2.1
3,310,345	+		OH686_15865	0.58	+0.3
3,310,345	+		OH686_15865	0.58	-1.3
3,310,345	+		OH686_15865	0.58	-0.8
3,310,345	+		OH686_15865	0.58	+0.0
3,310,345	+		OH686_15865	0.58	-1.3
3,310,345	+		OH686_15865	0.58	-1.5
3,310,345	+		OH686_15865	0.58	-1.9
3,310,345	+		OH686_15865	0.58	+0.9
3,310,345	+		OH686_15865	0.58	+0.0
3,310,345	+		OH686_15865	0.58	-0.8
3,310,346	-		OH686_15865	0.58	+0.9
3,310,346	-		OH686_15865	0.58	-0.7
3,310,346	-		OH686_15865	0.58	+1.0
3,310,346	-		OH686_15865	0.58	-0.4
3,310,346	-		OH686_15865	0.58	+0.2
3,310,346	-		OH686_15865	0.58	-0.5
3,310,346	-		OH686_15865	0.58	+0.3
3,310,346	-		OH686_15865	0.58	+1.0
3,310,346	-		OH686_15865	0.58	-0.1
3,310,363	+		OH686_15865	0.60	-0.4
3,310,363	+		OH686_15865	0.60	-0.1
3,310,364	-		OH686_15865	0.60	-0.1
3,310,415	-		OH686_15865	0.67	+0.2
3,310,432	+		OH686_15865	0.69	+0.0
3,310,432	+		OH686_15865	0.69	-0.6
3,310,432	+		OH686_15865	0.69	+0.6
3,310,433	-		OH686_15865	0.69	+0.4
3,310,433	-		OH686_15865	0.69	+0.3
3,310,517	+		OH686_15865	0.80	-0.5
3,310,517	+		OH686_15865	0.80	+0.8
3,310,518	-		OH686_15865	0.80	-0.5
3,310,612	+				-0.1
3,310,612	+				-0.5
3,310,612	+				-0.0
3,310,612	+				-0.4
3,310,613	-				+0.0
3,310,950	+		OH686_15870	0.23	+0.5
3,310,951	-		OH686_15870	0.23	-0.1
3,311,023	-		OH686_15870	0.29	-0.1
3,311,023	-		OH686_15870	0.29	-0.1
3,311,023	-		OH686_15870	0.29	+1.2
3,311,023	-		OH686_15870	0.29	+0.2
3,311,079	+		OH686_15870	0.34	-0.1
3,311,079	+		OH686_15870	0.34	-0.6
3,311,080	-		OH686_15870	0.34	+0.0
3,311,091	+		OH686_15870	0.35	+0.6
3,311,091	+		OH686_15870	0.35	+0.2
3,311,092	-		OH686_15870	0.35	-0.1
3,311,092	-		OH686_15870	0.35	+1.5
3,311,136	+		OH686_15870	0.38	+2.2
3,311,137	-		OH686_15870	0.38	+1.4
3,311,137	-		OH686_15870	0.38	+0.4
3,311,322	+		OH686_15870	0.54	-0.1
3,311,322	+		OH686_15870	0.54	-0.4
3,311,322	+		OH686_15870	0.54	-0.4
3,311,322	+		OH686_15870	0.54	-1.0
3,311,322	+		OH686_15870	0.54	-0.1
3,311,322	+		OH686_15870	0.54	-0.4
3,311,322	+		OH686_15870	0.54	+0.5
3,311,323	-		OH686_15870	0.54	+0.2
3,311,323	-		OH686_15870	0.54	+1.0
3,311,323	-		OH686_15870	0.54	+0.4
3,311,355	+		OH686_15870	0.57	+0.9
3,311,355	+		OH686_15870	0.57	+0.5
3,311,355	+		OH686_15870	0.57	-0.1
3,311,355	+		OH686_15870	0.57	+0.2
3,311,355	+		OH686_15870	0.57	+0.4
3,311,355	+		OH686_15870	0.57	+0.2
3,311,356	-		OH686_15870	0.57	-0.1
3,311,356	-		OH686_15870	0.57	+1.0
3,311,356	-		OH686_15870	0.57	-1.3
3,311,697	+		OH686_15870	0.85	-0.1
3,311,698	-		OH686_15870	0.85	+0.4
3,311,766	+				+0.2
3,311,781	+				-0.1
3,311,844	+				+0.9
3,311,845	-				-1.3
3,311,881	+				+0.2
3,311,881	+				-1.1
3,311,881	+				-0.3
3,311,882	-				+1.3
3,311,882	-				-0.3
3,311,882	-				-1.9
3,312,050	+				+1.0
3,312,050	+				-0.4
3,312,050	+				-0.8
3,312,050	+				-0.7
3,312,050	+				-1.1
3,312,051	-				+0.5
3,312,051	-				-0.1
3,312,051	-				+0.1
3,312,051	-				+0.7
3,312,051	-				+0.8
3,312,153	+		OH686_15875	0.22	+0.9
3,312,268	+		OH686_15875	0.37	+0.6
3,312,268	+		OH686_15875	0.37	-0.4
3,312,269	-		OH686_15875	0.38	+0.6
3,312,269	-		OH686_15875	0.38	-0.4
3,312,269	-		OH686_15875	0.38	+1.1
3,312,269	-		OH686_15875	0.38	+0.3
3,312,269	-		OH686_15875	0.38	-2.1
3,312,313	+		OH686_15875	0.43	-1.0
3,312,313	+		OH686_15875	0.43	-0.4
3,312,313	+		OH686_15875	0.43	-0.4
3,312,313	+		OH686_15875	0.43	-0.9
3,312,313	+		OH686_15875	0.43	+0.5
3,312,314	-		OH686_15875	0.44	-0.3
3,312,314	-		OH686_15875	0.44	+0.1
3,312,314	-		OH686_15875	0.44	-0.5
3,312,314	-		OH686_15875	0.44	+0.4
3,312,314	-		OH686_15875	0.44	+0.5
3,312,314	-		OH686_15875	0.44	+0.3
3,312,314	-		OH686_15875	0.44	-0.5
3,312,314	-		OH686_15875	0.44	-1.1
3,312,314	-		OH686_15875	0.44	+1.0
3,312,373	+		OH686_15875	0.51	-0.5
3,312,415	+		OH686_15875	0.57	+1.2
3,312,415	+		OH686_15875	0.57	-0.1
3,312,416	-		OH686_15875	0.57	-0.7
3,312,416	-		OH686_15875	0.57	+1.0
3,312,424	+		OH686_15875	0.58	+0.2
3,312,424	+		OH686_15875	0.58	-0.7
3,312,424	+		OH686_15875	0.58	-0.1
3,312,424	+		OH686_15875	0.58	-0.8
3,312,424	+		OH686_15875	0.58	+0.2
3,312,424	+		OH686_15875	0.58	-0.3
3,312,424	+		OH686_15875	0.58	-0.1
3,312,424	+		OH686_15875	0.58	-0.7
3,312,425	-		OH686_15875	0.58	+0.2
3,312,425	-		OH686_15875	0.58	-0.0
3,312,425	-		OH686_15875	0.58	-1.3
3,312,425	-		OH686_15875	0.58	-0.4
3,312,425	-		OH686_15875	0.58	-0.1
3,312,425	-		OH686_15875	0.58	-0.1
3,312,425	-		OH686_15875	0.58	+0.1
3,312,425	-		OH686_15875	0.58	+0.7
3,312,559	+		OH686_15875	0.76	-0.7
3,312,559	+		OH686_15875	0.76	+1.5
3,312,559	+		OH686_15875	0.76	+0.2
3,312,560	-		OH686_15875	0.76	+0.8
3,312,560	-		OH686_15875	0.76	-0.3
3,312,628	+		OH686_15875	0.85	+0.5
3,312,629	-		OH686_15875	0.85	+1.2
3,312,629	-		OH686_15875	0.85	-0.9
3,312,629	-		OH686_15875	0.85	+0.7
3,312,652	+		OH686_15875	0.88	-0.1
3,312,685	+				+1.1
3,312,686	-				+1.1
3,312,718	+				-0.8
3,312,718	+				+0.1
3,312,718	+				+0.2
3,312,718	+				+0.4
3,312,718	+				+0.5
3,312,718	+				+0.9
3,312,718	+				-0.5
3,312,718	+				-0.3
3,312,718	+				+0.2
3,312,718	+				-1.3
3,312,719	-				-1.4
3,312,719	-				-1.0
3,312,719	-				-0.6
3,312,719	-				-0.9
3,312,719	-				+0.7
3,312,719	-				+0.4
3,312,719	-				+0.2
3,312,719	-				+1.2
3,312,719	-				+0.9
3,312,838	+				-0.1
3,312,838	+				+0.0
3,312,838	+				-1.7
3,312,838	+				+0.8
3,312,838	+				-1.1
3,312,838	+				-2.1
3,312,838	+				-0.7
3,312,838	+				+0.5
3,312,838	+				+1.0
3,312,838	+				-0.3
3,312,838	+				+0.2
3,312,839	-				-0.2
3,312,839	-				-0.7
3,312,839	-				+0.9
3,312,839	-				-0.1
3,312,839	-				+0.1
3,312,839	-				-0.7
3,312,839	-				-0.1
3,312,839	-				+0.3
3,312,839	-				+0.5