Strain Fitness in Pseudomonas sp. S08-1

Strain Fitness in Pseudomonas sp. S08-1 around OH686_15140

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	D,L-Malic Acid (C)
				remove
3,177,504	+			-1.1
3,177,504	+			-2.2
3,177,505	-			-0.7
3,177,844	+	OH686_15135	0.37	-3.8
3,178,192	+	OH686_15135	0.70	-1.9
3,178,383	+	OH686_15135	0.89	-3.5
3,178,383	+	OH686_15135	0.89	+0.5
3,178,383	+	OH686_15135	0.89	-1.4
3,178,384	-	OH686_15135	0.89	-1.3
3,178,384	-	OH686_15135	0.89	-1.2
3,178,384	-	OH686_15135	0.89	-3.5
3,178,467	+			-1.3
3,178,468	-			-2.8
3,178,475	+			+0.2
3,178,475	+			-0.7
3,178,475	+			-0.8
3,178,476	-			-1.7
3,178,476	-			-1.3
3,178,750	-	OH686_15140	0.30	-0.4
3,178,750	-	OH686_15140	0.30	-1.5
3,178,750	-	OH686_15140	0.30	-2.8
3,178,750	-	OH686_15140	0.30	-1.2
3,178,750	-	OH686_15140	0.30	-1.9
3,178,818	+	OH686_15140	0.38	-2.3
3,178,818	+	OH686_15140	0.38	-0.3
3,178,819	-	OH686_15140	0.39	-2.9
3,178,819	-	OH686_15140	0.39	-2.2
3,178,891	+	OH686_15140	0.47	-2.4
3,178,891	+	OH686_15140	0.47	-1.4
3,178,891	+	OH686_15140	0.47	-1.8
3,178,891	+	OH686_15140	0.47	-1.4
3,178,892	-	OH686_15140	0.47	-2.2
3,178,892	-	OH686_15140	0.47	-0.5
3,178,892	-	OH686_15140	0.47	-2.4
3,178,954	+	OH686_15140	0.55	-0.6
3,178,954	+	OH686_15140	0.55	-3.5
3,178,954	+	OH686_15140	0.55	-1.7
3,178,954	+	OH686_15140	0.55	-2.1
3,178,954	+	OH686_15140	0.55	-3.5
3,178,954	+	OH686_15140	0.55	-2.3
3,178,954	+	OH686_15140	0.55	-0.1
3,178,954	+	OH686_15140	0.55	-3.4
3,178,954	+	OH686_15140	0.55	-1.8
3,178,954	+	OH686_15140	0.55	-2.5
3,178,954	+	OH686_15140	0.55	-1.0
3,178,954	+	OH686_15140	0.55	-1.9
3,178,954	+	OH686_15140	0.55	-1.6
3,178,954	+	OH686_15140	0.55	-3.0
3,178,954	+	OH686_15140	0.55	-1.6
3,178,954	+	OH686_15140	0.55	-2.3
3,178,954	+	OH686_15140	0.55	-2.3
3,178,954	+	OH686_15140	0.55	-2.0
3,178,954	+	OH686_15140	0.55	-0.5
3,178,954	+	OH686_15140	0.55	-1.6
3,178,954	+	OH686_15140	0.55	-1.9
3,178,954	+	OH686_15140	0.55	-1.5
3,178,954	+	OH686_15140	0.55	-1.6
3,178,954	+	OH686_15140	0.55	-2.7
3,178,954	+	OH686_15140	0.55	-0.9
3,178,954	+	OH686_15140	0.55	-3.1
3,178,954	+	OH686_15140	0.55	-3.1
3,178,954	+	OH686_15140	0.55	-2.8
3,178,955	-	OH686_15140	0.55	+0.6
3,178,955	-	OH686_15140	0.55	-1.4
3,178,955	-	OH686_15140	0.55	-3.0
3,178,955	-	OH686_15140	0.55	-2.0
3,178,955	-	OH686_15140	0.55	-2.2
3,178,955	-	OH686_15140	0.55	-0.7
3,178,955	-	OH686_15140	0.55	-1.8
3,178,955	-	OH686_15140	0.55	-0.4
3,178,955	-	OH686_15140	0.55	-1.4
3,178,955	-	OH686_15140	0.55	-1.9
3,178,955	-	OH686_15140	0.55	-2.7
3,178,955	-	OH686_15140	0.55	-1.2
3,178,955	-	OH686_15140	0.55	-2.4
3,178,955	-	OH686_15140	0.55	-0.7
3,178,955	-	OH686_15140	0.55	-1.3
3,178,955	-	OH686_15140	0.55	-3.3
3,178,955	-	OH686_15140	0.55	-2.0
3,178,955	-	OH686_15140	0.55	-0.6
3,178,955	-	OH686_15140	0.55	-1.4
3,178,955	-	OH686_15140	0.55	-0.6
3,178,955	-	OH686_15140	0.55	-1.3
3,178,955	-	OH686_15140	0.55	-3.8
3,178,955	-	OH686_15140	0.55	-2.5
3,178,955	-	OH686_15140	0.55	-2.0
3,178,955	-	OH686_15140	0.55	-1.9
3,178,955	-	OH686_15140	0.55	-2.9
3,178,955	-	OH686_15140	0.55	-2.3
3,178,958	+	OH686_15140	0.55	-1.3
3,178,958	+	OH686_15140	0.55	-1.8
3,178,958	+	OH686_15140	0.55	-2.7
3,178,958	+	OH686_15140	0.55	-2.9
3,178,958	+	OH686_15140	0.55	-1.0
3,178,958	+	OH686_15140	0.55	+0.9
3,178,958	+	OH686_15140	0.55	-2.9
3,178,958	+	OH686_15140	0.55	-1.1
3,178,959	-	OH686_15140	0.55	-2.2
3,178,959	-	OH686_15140	0.55	-3.5
3,178,959	-	OH686_15140	0.55	-0.4
3,178,959	-	OH686_15140	0.55	-4.0
3,178,959	-	OH686_15140	0.55	-2.2
3,178,959	-	OH686_15140	0.55	-0.9
3,178,959	-	OH686_15140	0.55	-0.8
3,178,959	-	OH686_15140	0.55	-1.7
3,179,220	+	OH686_15140	0.87	-3.2
3,179,220	+	OH686_15140	0.87	-0.8
3,179,220	+	OH686_15140	0.87	-1.5
3,179,220	+	OH686_15140	0.87	-0.9
3,179,220	+	OH686_15140	0.87	-0.9
3,179,220	+	OH686_15140	0.87	-1.8
3,179,220	+	OH686_15140	0.87	-2.2
3,179,221	-	OH686_15140	0.87	-2.9
3,179,221	-	OH686_15140	0.87	-1.9
3,179,221	-	OH686_15140	0.87	-0.7
3,179,221	-	OH686_15140	0.87	-3.1
3,179,221	-	OH686_15140	0.87	+0.7
3,179,221	-	OH686_15140	0.87	-0.5
3,179,221	-	OH686_15140	0.87	-1.9
3,179,342	+			-2.9
3,179,343	-			+0.3
3,179,372	+			-0.1
3,179,373	-			+0.7
3,179,373	-			-0.1
3,179,392	+			-0.6
3,179,392	+			-0.0
3,179,393	-			-1.6
3,179,403	+			-0.2
3,179,432	+			+0.0
3,179,432	+			-0.7
3,179,432	+			+0.6
3,179,432	+			+0.6
3,179,432	+			+0.4
3,179,432	+			-0.1
3,179,432	+			+1.2
3,179,432	+			-1.1
3,179,432	+			+1.2
3,179,432	+			+0.4
3,179,432	+			-0.1
3,179,433	-			-0.9
3,179,433	-			+0.1
3,179,433	-			-1.3
3,179,433	-			+0.6
3,179,433	-			+0.8
3,179,433	-			+0.4
3,179,441	+			+0.6
3,179,441	+			+1.2
3,179,441	+			-0.3
3,179,441	+			+0.9
3,179,441	+			+0.1
3,179,441	+			+0.6
3,179,441	+			-0.3
3,179,441	+			+0.5
3,179,442	-			-0.2
3,179,442	-			-0.3
3,179,442	-			-0.3
3,179,735	+	OH686_15145	0.37	+0.4
3,179,735	+	OH686_15145	0.37	-0.1
3,179,735	+	OH686_15145	0.37	-0.7
3,179,736	-	OH686_15145	0.37	+0.0
3,179,787	+	OH686_15145	0.45	-0.3
3,179,787	+	OH686_15145	0.45	+0.1
3,179,788	-	OH686_15145	0.45	-0.0
3,179,832	+	OH686_15145	0.52	-0.3
3,179,832	+	OH686_15145	0.52	+0.4
3,179,832	+	OH686_15145	0.52	-0.5
3,179,832	+	OH686_15145	0.52	+0.4
3,179,832	+	OH686_15145	0.52	-1.5
3,179,833	-	OH686_15145	0.52	+0.7
3,179,833	-	OH686_15145	0.52	+0.2
3,179,833	-	OH686_15145	0.52	+0.9
3,179,833	-	OH686_15145	0.52	-0.1
3,179,949	+	OH686_15145	0.70	+0.1
3,179,950	-	OH686_15145	0.70	+0.5
3,179,950	-	OH686_15145	0.70	-0.4
3,179,950	-	OH686_15145	0.70	+1.0
3,180,045	+	OH686_15145	0.85	+0.6
3,180,045	+	OH686_15145	0.85	+1.1
3,180,045	+	OH686_15145	0.85	-1.8
3,180,045	+	OH686_15145	0.85	+0.1
3,180,045	+	OH686_15145	0.85	-0.5
3,180,045	+	OH686_15145	0.85	-2.3
3,180,045	+	OH686_15145	0.85	+0.8
3,180,045	+	OH686_15145	0.85	+0.6
3,180,045	+	OH686_15145	0.85	+0.6
3,180,045	+	OH686_15145	0.85	+0.1
3,180,045	+	OH686_15145	0.85	+0.5
3,180,046	-	OH686_15145	0.85	-0.2
3,180,046	-	OH686_15145	0.85	+1.8
3,180,046	-	OH686_15145	0.85	+0.8
3,180,046	-	OH686_15145	0.85	+0.2
3,180,046	-	OH686_15145	0.85	+0.1
3,180,046	-	OH686_15145	0.85	-0.5
3,180,067	+	OH686_15145	0.88	+1.5
3,180,069	+	OH686_15145	0.89	-0.8
3,180,069	+	OH686_15145	0.89	+0.4
3,180,069	+	OH686_15145	0.89	+0.3
3,180,104	+			-0.9
3,180,124	+			+0.7
3,180,124	+			-0.1
3,180,124	+			-0.4
3,180,125	-			-0.4
3,180,125	-			+0.3
3,180,125	-			+0.2
3,180,125	-			-0.6
3,180,133	+			+0.4
3,180,133	+			+0.0
3,180,133	+			-0.2
3,180,133	+			-0.2
3,180,133	+			+0.3
3,180,133	+			-0.1
3,180,133	+			-0.3
3,180,133	+			-0.0
3,180,133	+			+0.2
3,180,133	+			+0.6
3,180,133	+			-0.1
3,180,133	+			-0.2
3,180,133	+			-0.0
3,180,133	+			-0.3
3,180,133	+			-0.7
3,180,133	+			+0.5
3,180,133	+			+0.3
3,180,133	+			-0.2
3,180,133	+			-0.1
3,180,133	+			+0.6
3,180,133	+			-0.1
3,180,133	+			+1.0
3,180,134	-			+0.4
3,180,134	-			-0.4
3,180,134	-			-0.6
3,180,134	-			+2.1
3,180,134	-			-0.1
3,180,134	-			+0.9
3,180,134	-			-0.6
3,180,134	-			+1.1
3,180,134	-			+0.5
3,180,134	-			+0.4
3,180,134	-			-0.1
3,180,137	+			-0.2
3,180,137	+			-0.3
3,180,137	+			-0.4
3,180,137	+			+0.0
3,180,137	+			+0.2
3,180,137	+			+0.6
3,180,137	+			-0.1
3,180,137	+			+1.2
3,180,137	+			+0.4
3,180,137	+			+0.9
3,180,138	-			+0.9
3,180,138	-			+1.1
3,180,138	-			+0.1
3,180,138	-			+1.0
3,180,138	-			+1.4
3,180,138	-			+0.7
3,180,138	-			+0.3
3,180,163	+			+0.0
3,180,163	+			+0.9
3,180,163	+			+0.2
3,180,163	+			+0.1
3,180,163	+			-1.5
3,180,164	-			+0.1
3,180,164	-			-0.3
3,180,191	+			+0.8
3,180,191	+			-0.3
3,180,194	+			+2.2
3,180,194	+			-0.0
3,180,195	-			+0.2
3,180,199	-			-0.1
3,180,234	+			-0.9
3,180,325	+			-0.6
3,180,326	-			-2.7
3,180,326	-			+0.2

Or see this region's nucleotide sequence