Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_14825 and OH686_14830 are separated by 93 nucleotides OH686_14830 and OH686_14835 are separated by 53 nucleotides OH686_14835 and OH686_14840 overlap by 24 nucleotides
OH686_14825: OH686_14825 - hypothetical protein, at 3,116,917 to 3,117,912
_14825
OH686_14830: OH686_14830 - CBS domain protein, at 3,118,006 to 3,118,440
_14830
OH686_14835: OH686_14835 - CDS, at 3,118,494 to 3,118,634
_14835
OH686_14840: OH686_14840 - Inner membrane protein CreD, at 3,118,611 to 3,120,014
_14840
Position (kb)
3118
3119 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3117.494 kb on - strand, within OH686_14825 at 3117.494 kb on - strand, within OH686_14825 at 3117.528 kb on + strand, within OH686_14825 at 3117.528 kb on + strand, within OH686_14825 at 3117.528 kb on + strand, within OH686_14825 at 3117.530 kb on - strand, within OH686_14825 at 3117.736 kb on + strand, within OH686_14825 at 3117.736 kb on + strand, within OH686_14825 at 3117.736 kb on + strand, within OH686_14825 at 3117.737 kb on - strand, within OH686_14825 at 3117.737 kb on - strand, within OH686_14825 at 3117.737 kb on - strand, within OH686_14825 at 3117.737 kb on - strand, within OH686_14825 at 3117.739 kb on + strand, within OH686_14825 at 3117.739 kb on + strand, within OH686_14825 at 3117.739 kb on + strand, within OH686_14825 at 3117.739 kb on + strand, within OH686_14825 at 3117.739 kb on + strand, within OH686_14825 at 3117.739 kb on + strand, within OH686_14825 at 3117.739 kb on + strand, within OH686_14825 at 3117.739 kb on + strand, within OH686_14825 at 3117.739 kb on + strand, within OH686_14825 at 3117.739 kb on + strand, within OH686_14825 at 3117.739 kb on + strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.740 kb on - strand, within OH686_14825 at 3117.920 kb on + strand at 3117.920 kb on + strand at 3117.921 kb on - strand at 3117.921 kb on - strand at 3117.921 kb on - strand at 3118.048 kb on + strand at 3118.048 kb on + strand at 3118.048 kb on + strand at 3118.048 kb on + strand at 3118.048 kb on + strand at 3118.048 kb on + strand at 3118.048 kb on + strand at 3118.048 kb on + strand at 3118.049 kb on - strand at 3118.049 kb on - strand at 3118.049 kb on - strand at 3118.049 kb on - strand at 3118.049 kb on - strand at 3118.049 kb on - strand at 3118.049 kb on - strand at 3118.049 kb on - strand at 3118.175 kb on - strand, within OH686_14830 at 3118.175 kb on - strand, within OH686_14830 at 3118.175 kb on - strand, within OH686_14830 at 3118.423 kb on + strand at 3118.423 kb on + strand at 3118.423 kb on + strand at 3118.423 kb on + strand at 3118.423 kb on + strand at 3118.423 kb on + strand at 3118.423 kb on + strand at 3118.424 kb on - strand at 3118.424 kb on - strand at 3118.424 kb on - strand at 3118.424 kb on - strand at 3118.424 kb on - strand at 3118.495 kb on + strand at 3118.495 kb on + strand at 3118.495 kb on + strand at 3118.495 kb on + strand at 3118.495 kb on + strand at 3118.495 kb on + strand at 3118.495 kb on + strand at 3118.495 kb on + strand at 3118.496 kb on - strand at 3118.496 kb on - strand at 3118.504 kb on + strand at 3118.504 kb on + strand at 3118.504 kb on + strand at 3118.505 kb on - strand at 3118.534 kb on - strand, within OH686_14835 at 3118.545 kb on - strand, within OH686_14835 at 3118.840 kb on + strand, within OH686_14840 at 3118.840 kb on + strand, within OH686_14840 at 3118.840 kb on + strand, within OH686_14840 at 3118.840 kb on + strand, within OH686_14840 at 3118.840 kb on + strand, within OH686_14840 at 3118.840 kb on + strand, within OH686_14840 at 3118.840 kb on + strand, within OH686_14840 at 3118.841 kb on - strand, within OH686_14840 at 3118.841 kb on - strand, within OH686_14840 at 3118.900 kb on - strand, within OH686_14840 at 3118.932 kb on + strand, within OH686_14840 at 3118.932 kb on + strand, within OH686_14840 at 3118.932 kb on + strand, within OH686_14840 at 3118.932 kb on + strand, within OH686_14840 at 3118.932 kb on + strand, within OH686_14840 at 3118.932 kb on + strand, within OH686_14840 at 3118.933 kb on - strand, within OH686_14840 at 3118.933 kb on - strand, within OH686_14840 at 3118.933 kb on - strand, within OH686_14840 at 3118.998 kb on + strand, within OH686_14840 at 3118.998 kb on + strand, within OH686_14840 at 3118.998 kb on + strand, within OH686_14840 at 3118.999 kb on - strand, within OH686_14840 at 3118.999 kb on - strand, within OH686_14840 at 3118.999 kb on - strand, within OH686_14840 at 3118.999 kb on - strand, within OH686_14840 at 3118.999 kb on - strand, within OH686_14840 at 3118.999 kb on - strand, within OH686_14840 at 3119.394 kb on + strand, within OH686_14840 at 3119.394 kb on + strand, within OH686_14840 at 3119.395 kb on - strand, within OH686_14840 at 3119.565 kb on + strand, within OH686_14840 at 3119.566 kb on - strand, within OH686_14840 at 3119.566 kb on - strand, within OH686_14840 at 3119.592 kb on + strand, within OH686_14840 at 3119.592 kb on + strand, within OH686_14840 at 3119.592 kb on + strand, within OH686_14840 at 3119.593 kb on - strand, within OH686_14840 at 3119.593 kb on - strand, within OH686_14840 at 3119.593 kb on - strand, within OH686_14840 at 3119.593 kb on - strand, within OH686_14840 at 3119.593 kb on - strand, within OH686_14840 at 3119.593 kb on - strand, within OH686_14840 at 3119.593 kb on - strand, within OH686_14840 at 3119.593 kb on - strand, within OH686_14840 at 3119.593 kb on - strand, within OH686_14840 at 3119.593 kb on - strand, within OH686_14840 at 3119.593 kb on - strand, within OH686_14840
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 3,117,494 - OH686_14825 0.58 +0.9 3,117,494 - OH686_14825 0.58 +0.1 3,117,528 + OH686_14825 0.61 -0.0 3,117,528 + OH686_14825 0.61 +0.5 3,117,528 + OH686_14825 0.61 +0.6 3,117,530 - OH686_14825 0.62 -0.3 3,117,736 + OH686_14825 0.82 -1.9 3,117,736 + OH686_14825 0.82 +1.1 3,117,736 + OH686_14825 0.82 -1.9 3,117,737 - OH686_14825 0.82 +0.1 3,117,737 - OH686_14825 0.82 -0.6 3,117,737 - OH686_14825 0.82 +0.9 3,117,737 - OH686_14825 0.82 -0.8 3,117,739 + OH686_14825 0.83 -0.4 3,117,739 + OH686_14825 0.83 +0.1 3,117,739 + OH686_14825 0.83 -0.2 3,117,739 + OH686_14825 0.83 -0.1 3,117,739 + OH686_14825 0.83 -0.3 3,117,739 + OH686_14825 0.83 +0.2 3,117,739 + OH686_14825 0.83 -0.4 3,117,739 + OH686_14825 0.83 +0.3 3,117,739 + OH686_14825 0.83 +0.1 3,117,739 + OH686_14825 0.83 +0.0 3,117,739 + OH686_14825 0.83 +1.1 3,117,740 - OH686_14825 0.83 -2.0 3,117,740 - OH686_14825 0.83 +0.2 3,117,740 - OH686_14825 0.83 -0.0 3,117,740 - OH686_14825 0.83 +0.2 3,117,740 - OH686_14825 0.83 +0.1 3,117,740 - OH686_14825 0.83 -0.5 3,117,740 - OH686_14825 0.83 +0.4 3,117,740 - OH686_14825 0.83 -0.1 3,117,740 - OH686_14825 0.83 -0.8 3,117,740 - OH686_14825 0.83 +0.4 3,117,740 - OH686_14825 0.83 -1.3 3,117,740 - OH686_14825 0.83 -0.1 3,117,740 - OH686_14825 0.83 +1.1 3,117,740 - OH686_14825 0.83 +0.5 3,117,740 - OH686_14825 0.83 +0.3 3,117,740 - OH686_14825 0.83 +0.6 3,117,740 - OH686_14825 0.83 -0.7 3,117,740 - OH686_14825 0.83 +0.7 3,117,920 + -0.3 3,117,920 + +0.2 3,117,921 - +0.3 3,117,921 - +1.2 3,117,921 - +0.5 3,118,048 + +1.2 3,118,048 + +2.2 3,118,048 + -0.0 3,118,048 + -1.5 3,118,048 + +0.3 3,118,048 + +0.1 3,118,048 + +0.5 3,118,048 + -0.0 3,118,049 - -1.0 3,118,049 - +1.3 3,118,049 - +0.2 3,118,049 - +1.1 3,118,049 - -0.4 3,118,049 - +0.8 3,118,049 - +1.8 3,118,049 - -0.6 3,118,175 - OH686_14830 0.39 +0.8 3,118,175 - OH686_14830 0.39 +0.4 3,118,175 - OH686_14830 0.39 +0.7 3,118,423 + +1.1 3,118,423 + -0.3 3,118,423 + -0.6 3,118,423 + +0.0 3,118,423 + +1.1 3,118,423 + -0.3 3,118,423 + -1.1 3,118,424 - +1.1 3,118,424 - -0.7 3,118,424 - +1.4 3,118,424 - +0.3 3,118,424 - +0.9 3,118,495 + -0.1 3,118,495 + +0.1 3,118,495 + -0.1 3,118,495 + +0.6 3,118,495 + +0.5 3,118,495 + +0.2 3,118,495 + -1.7 3,118,495 + +0.8 3,118,496 - -0.8 3,118,496 - +0.3 3,118,504 + +0.4 3,118,504 + +0.3 3,118,504 + -0.6 3,118,505 - -0.1 3,118,534 - OH686_14835 0.28 -1.2 3,118,545 - OH686_14835 0.36 -1.2 3,118,840 + OH686_14840 0.16 +0.8 3,118,840 + OH686_14840 0.16 +0.1 3,118,840 + OH686_14840 0.16 -0.6 3,118,840 + OH686_14840 0.16 -1.2 3,118,840 + OH686_14840 0.16 +1.2 3,118,840 + OH686_14840 0.16 +0.7 3,118,840 + OH686_14840 0.16 +1.0 3,118,841 - OH686_14840 0.16 -1.2 3,118,841 - OH686_14840 0.16 -0.8 3,118,900 - OH686_14840 0.21 -0.5 3,118,932 + OH686_14840 0.23 -1.3 3,118,932 + OH686_14840 0.23 +0.4 3,118,932 + OH686_14840 0.23 +0.2 3,118,932 + OH686_14840 0.23 -0.8 3,118,932 + OH686_14840 0.23 -1.0 3,118,932 + OH686_14840 0.23 +0.0 3,118,933 - OH686_14840 0.23 -0.8 3,118,933 - OH686_14840 0.23 -0.2 3,118,933 - OH686_14840 0.23 +0.3 3,118,998 + OH686_14840 0.28 -0.1 3,118,998 + OH686_14840 0.28 -0.1 3,118,998 + OH686_14840 0.28 +0.9 3,118,999 - OH686_14840 0.28 +0.6 3,118,999 - OH686_14840 0.28 +1.1 3,118,999 - OH686_14840 0.28 -0.9 3,118,999 - OH686_14840 0.28 +0.3 3,118,999 - OH686_14840 0.28 -0.7 3,118,999 - OH686_14840 0.28 -0.0 3,119,394 + OH686_14840 0.56 +1.4 3,119,394 + OH686_14840 0.56 +2.5 3,119,395 - OH686_14840 0.56 -1.1 3,119,565 + OH686_14840 0.68 +0.2 3,119,566 - OH686_14840 0.68 -0.5 3,119,566 - OH686_14840 0.68 -0.2 3,119,592 + OH686_14840 0.70 +0.6 3,119,592 + OH686_14840 0.70 -0.1 3,119,592 + OH686_14840 0.70 +0.1 3,119,593 - OH686_14840 0.70 +0.5 3,119,593 - OH686_14840 0.70 -1.8 3,119,593 - OH686_14840 0.70 +1.2 3,119,593 - OH686_14840 0.70 -0.1 3,119,593 - OH686_14840 0.70 -0.9 3,119,593 - OH686_14840 0.70 +0.2 3,119,593 - OH686_14840 0.70 -0.6 3,119,593 - OH686_14840 0.70 -0.5 3,119,593 - OH686_14840 0.70 -1.6 3,119,593 - OH686_14840 0.70 -0.2 3,119,593 - OH686_14840 0.70 +0.4
Or see this region's nucleotide sequence