Strain Fitness in Pseudomonas sp. S08-1 around OH686_13550

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
2,842,853	+		OH686_13540	0.28	+0.5
2,842,853	+		OH686_13540	0.28	-0.9
2,842,853	+		OH686_13540	0.28	+0.4
2,842,854	-		OH686_13540	0.28	-0.6
2,842,854	-		OH686_13540	0.28	+0.2
2,842,854	-		OH686_13540	0.28	-0.9
2,842,955	+		OH686_13540	0.42	+0.3
2,842,955	+		OH686_13540	0.42	-0.3
2,842,955	+		OH686_13540	0.42	+0.5
2,842,955	+		OH686_13540	0.42	+0.7
2,842,964	+		OH686_13540	0.43	+0.7
2,842,964	+		OH686_13540	0.43	+0.2
2,842,964	+		OH686_13540	0.43	-0.3
2,842,964	+		OH686_13540	0.43	-0.0
2,842,964	+		OH686_13540	0.43	-0.2
2,842,965	-		OH686_13540	0.43	+0.5
2,842,965	-		OH686_13540	0.43	-1.6
2,843,048	+		OH686_13540	0.55	+0.7
2,843,048	+		OH686_13540	0.55	-1.8
2,843,048	+		OH686_13540	0.55	-0.2
2,843,049	-		OH686_13540	0.55	-1.8
2,843,049	-		OH686_13540	0.55	-0.4
2,843,049	-		OH686_13540	0.55	+0.4
2,843,049	-		OH686_13540	0.55	+0.8
2,843,114	+		OH686_13540	0.64	-0.2
2,843,114	+		OH686_13540	0.64	-0.1
2,843,114	+		OH686_13540	0.64	-0.9
2,843,115	-		OH686_13540	0.64	-1.3
2,843,115	-		OH686_13540	0.64	-1.7
2,843,183	+		OH686_13540	0.73	-0.5
2,843,183	+		OH686_13540	0.73	-0.1
2,843,183	+		OH686_13540	0.73	+1.1
2,843,183	+		OH686_13540	0.73	-0.1
2,843,183	+		OH686_13540	0.73	-0.7
2,843,183	+		OH686_13540	0.73	-0.5
2,843,183	+		OH686_13540	0.73	+0.2
2,843,183	+		OH686_13540	0.73	+0.0
2,843,184	-		OH686_13540	0.74	+0.5
2,843,184	-		OH686_13540	0.74	-0.0
2,843,184	-		OH686_13540	0.74	-0.4
2,843,184	-		OH686_13540	0.74	-0.2
2,843,184	-		OH686_13540	0.74	-0.6
2,843,184	-		OH686_13540	0.74	-0.6
2,843,184	-		OH686_13540	0.74	+0.5
2,843,184	-		OH686_13540	0.74	-0.3
2,843,184	-		OH686_13540	0.74	+0.0
2,843,184	-		OH686_13540	0.74	-0.1
2,843,184	-		OH686_13540	0.74	-0.2
2,843,184	-		OH686_13540	0.74	+0.4
2,843,184	-		OH686_13540	0.74	+1.0
2,843,383	-				-0.7
2,843,383	-				-1.4
2,843,478	+		OH686_13545	0.25	-2.6
2,843,478	+		OH686_13545	0.25	-1.4
2,843,478	+		OH686_13545	0.25	-2.4
2,843,676	+		OH686_13545	0.77	-0.1
2,843,676	+		OH686_13545	0.77	-2.5
2,843,676	+		OH686_13545	0.77	-3.9
2,843,676	+		OH686_13545	0.77	-1.9
2,843,676	+		OH686_13545	0.77	-1.9
2,843,676	+		OH686_13545	0.77	-2.9
2,843,676	+		OH686_13545	0.77	-0.8
2,843,676	+		OH686_13545	0.77	-1.4
2,843,676	+		OH686_13545	0.77	-3.1
2,843,676	+		OH686_13545	0.77	-2.7
2,843,677	-		OH686_13545	0.78	-3.2
2,843,677	-		OH686_13545	0.78	-2.3
2,843,677	-		OH686_13545	0.78	-0.9
2,843,677	-		OH686_13545	0.78	-2.9
2,843,677	-		OH686_13545	0.78	-3.6
2,843,677	-		OH686_13545	0.78	-2.6
2,843,677	-		OH686_13545	0.78	-3.2
2,843,677	-		OH686_13545	0.78	-3.0
2,843,677	-		OH686_13545	0.78	-0.9
2,843,677	-		OH686_13545	0.78	-2.5
2,843,677	-		OH686_13545	0.78	-1.5
2,843,709	+		OH686_13545	0.86	-2.0
2,843,709	+		OH686_13545	0.86	-3.0
2,843,709	+		OH686_13545	0.86	-2.0
2,843,709	+		OH686_13545	0.86	-2.6
2,843,709	+		OH686_13545	0.86	-2.6
2,843,710	-		OH686_13545	0.86	-2.3
2,843,710	-		OH686_13545	0.86	-0.9
2,843,710	-		OH686_13545	0.86	-1.1
2,843,710	-		OH686_13545	0.86	-0.7
2,843,710	-		OH686_13545	0.86	-2.1
2,843,710	-		OH686_13545	0.86	-3.3
2,843,710	-		OH686_13545	0.86	+0.3
2,843,710	-		OH686_13545	0.86	-0.5
2,843,710	-		OH686_13545	0.86	-2.9
2,843,710	-		OH686_13545	0.86	-3.6
2,843,710	-		OH686_13545	0.86	-2.0
2,843,713	+		OH686_13545	0.87	-1.0
2,843,713	+		OH686_13545	0.87	-2.0
2,843,714	-		OH686_13545	0.87	-1.5
2,843,792	+				-0.3
2,843,792	+				-0.2
2,843,792	+				+0.0
2,843,792	+				+0.2
2,843,793	-				+0.4
2,843,793	-				+0.5
2,843,793	-				-0.4
2,843,793	-				-0.2
2,844,166	-		OH686_13550	0.17	-0.5
2,844,210	+		OH686_13550	0.19	-0.6
2,844,211	-		OH686_13550	0.19	+0.3
2,844,310	-		OH686_13550	0.24	+0.3
2,844,369	+		OH686_13550	0.27	+1.3
2,845,907	+				+0.3
2,845,907	+				+1.3
2,845,907	+				-1.3
2,845,907	+				-0.4
2,845,907	+				-0.1
2,845,907	+				-0.3
2,845,907	+				-0.5
2,845,907	+				-2.1
2,845,907	+				-2.3
2,845,907	+				-1.0
2,845,907	+				+0.8
2,845,907	+				+0.9
2,845,907	+				+0.9
2,845,907	+				-0.7
2,845,907	+				-0.4
2,845,907	+				-0.8
2,845,907	+				-1.7
2,845,907	+				+0.3
2,845,907	+				-1.3
2,845,908	-				-0.7
2,845,908	-				-0.3
2,845,908	-				-0.8
2,845,908	-				+0.7
2,845,908	-				+0.3
2,845,908	-				-0.7
2,845,908	-				-0.8
2,845,908	-				-0.9
2,845,908	-				-0.1
2,845,908	-				-1.3
2,845,908	-				-0.8
2,845,908	-				-0.7
2,845,908	-				-0.4
2,845,908	-				-1.8
2,845,908	-				+0.3
2,845,908	-				-1.0
2,845,908	-				-1.0
2,845,908	-				-0.1
2,845,977	+				+0.6
2,845,977	+				-0.9
2,845,977	+				-0.3
2,845,977	+				+0.5
2,845,977	+				-0.8
2,845,977	+				+0.4
2,845,977	+				+1.9
2,845,977	+				-0.2
2,845,977	+				+0.9
2,845,978	-				+0.1
2,845,978	-				+1.3
2,845,978	-				+0.7
2,845,978	-				+0.0
2,845,978	-				+0.4
2,845,978	-				-0.7
2,845,978	-				-0.7
2,845,978	-				-0.3
2,845,983	+				-1.0
2,845,983	+				-0.7
2,845,983	+				-0.5
2,845,984	-				-0.2
2,845,984	-				-1.9
2,845,984	-				-0.6
2,845,984	-				-0.5
2,845,984	-				-0.4
2,845,984	-				-0.3
2,846,210	+		OH686_13555	0.85	-0.9
2,846,210	+		OH686_13555	0.85	+0.9
2,846,210	+		OH686_13555	0.85	+0.3
2,846,210	+		OH686_13555	0.85	+0.7
2,846,210	+		OH686_13555	0.85	-0.1
2,846,210	+		OH686_13555	0.85	+0.7
2,846,211	-		OH686_13555	0.86	+0.6
2,846,211	-		OH686_13555	0.86	+1.0
2,846,211	-		OH686_13555	0.86	-0.1
2,846,211	-		OH686_13555	0.86	+0.6
2,846,211	-		OH686_13555	0.86	+0.3
2,846,211	-		OH686_13555	0.86	+0.9
2,846,211	-		OH686_13555	0.86	+0.4
2,846,211	-		OH686_13555	0.86	+0.6
2,846,211	-		OH686_13555	0.86	-0.8
2,846,268	-				+0.9
2,846,268	-				+0.1
2,846,274	+				+0.5
2,846,274	+				-0.3
2,846,274	+				-0.7
2,846,274	+				-1.3
2,846,274	+				+0.9
2,846,274	+				+0.5
2,846,274	+				+1.5
2,846,274	+				+0.3
2,846,275	-				-0.1
2,846,275	-				+0.1
2,846,275	-				-0.6
2,846,275	-				+0.3
2,846,275	-				+0.1
2,846,275	-				+0.5
2,846,275	-				-1.4
2,846,275	-				+0.3
2,846,275	-				-0.1
2,846,275	-				+0.5
2,846,275	-				+0.7