Strain Fitness in Pseudomonas sp. S08-1 around OH686_13460

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
2,827,570	+		OH686_13455	0.40	+1.0
2,827,570	+		OH686_13455	0.40	+1.3
2,827,570	+		OH686_13455	0.40	+1.9
2,827,571	-		OH686_13455	0.40	-0.0
2,827,571	-		OH686_13455	0.40	+1.1
2,827,571	-		OH686_13455	0.40	+0.7
2,827,645	+		OH686_13455	0.46	-1.0
2,827,645	+		OH686_13455	0.46	+1.9
2,827,645	+		OH686_13455	0.46	+0.7
2,827,645	+		OH686_13455	0.46	-0.6
2,827,645	+		OH686_13455	0.46	+1.5
2,827,645	+		OH686_13455	0.46	-0.5
2,827,645	+		OH686_13455	0.46	-1.7
2,827,645	+		OH686_13455	0.46	+1.6
2,827,645	+		OH686_13455	0.46	+0.3
2,827,645	+		OH686_13455	0.46	+0.8
2,827,645	+		OH686_13455	0.46	+0.5
2,827,646	-		OH686_13455	0.46	-1.1
2,827,646	-		OH686_13455	0.46	-0.7
2,827,646	-		OH686_13455	0.46	+0.4
2,827,646	-		OH686_13455	0.46	-0.7
2,827,646	-		OH686_13455	0.46	-0.0
2,827,646	-		OH686_13455	0.46	+0.1
2,827,646	-		OH686_13455	0.46	-0.3
2,827,646	-		OH686_13455	0.46	+0.6
2,827,646	-		OH686_13455	0.46	-1.2
2,827,789	+		OH686_13455	0.57	+1.1
2,827,789	+		OH686_13455	0.57	-0.3
2,827,789	+		OH686_13455	0.57	-0.2
2,827,789	+		OH686_13455	0.57	+0.1
2,827,790	-		OH686_13455	0.57	-0.5
2,827,790	-		OH686_13455	0.57	+0.7
2,827,790	-		OH686_13455	0.57	-0.5
2,827,790	-		OH686_13455	0.57	+0.1
2,827,790	-		OH686_13455	0.57	-1.3
2,827,867	+		OH686_13455	0.62	+0.3
2,827,867	+		OH686_13455	0.62	+0.4
2,827,867	+		OH686_13455	0.62	-0.3
2,827,867	+		OH686_13455	0.62	+0.7
2,827,867	+		OH686_13455	0.62	+2.0
2,827,868	-		OH686_13455	0.63	-0.2
2,827,868	-		OH686_13455	0.63	+0.4
2,827,868	-		OH686_13455	0.63	-0.2
2,827,868	-		OH686_13455	0.63	+0.6
2,827,868	-		OH686_13455	0.63	+0.6
2,827,868	-		OH686_13455	0.63	+1.1
2,827,868	-		OH686_13455	0.63	-0.0
2,827,868	-		OH686_13455	0.63	-0.0
2,827,879	+		OH686_13455	0.63	-0.3
2,827,879	+		OH686_13455	0.63	+0.4
2,827,880	-		OH686_13455	0.63	-1.8
2,827,880	-		OH686_13455	0.63	-0.1
2,827,891	+		OH686_13455	0.64	-1.7
2,827,891	+		OH686_13455	0.64	+1.5
2,827,891	+		OH686_13455	0.64	+0.3
2,827,891	+		OH686_13455	0.64	+0.2
2,827,892	-		OH686_13455	0.64	-0.0
2,827,892	-		OH686_13455	0.64	-0.2
2,827,892	-		OH686_13455	0.64	+1.3
2,827,901	-		OH686_13455	0.65	+0.3
2,827,901	-		OH686_13455	0.65	-0.5
2,827,901	-		OH686_13455	0.65	-0.5
2,827,901	-		OH686_13455	0.65	+0.7
2,827,901	-		OH686_13455	0.65	-1.0
2,827,901	-		OH686_13455	0.65	+0.3
2,827,901	-		OH686_13455	0.65	+1.3
2,827,901	-		OH686_13455	0.65	-0.2
2,827,990	+		OH686_13455	0.72	+0.5
2,827,990	+		OH686_13455	0.72	-0.5
2,827,991	-		OH686_13455	0.72	+1.3
2,827,991	-		OH686_13455	0.72	+1.3
2,827,991	-		OH686_13455	0.72	+0.3
2,828,000	+		OH686_13455	0.72	+0.2
2,828,001	-		OH686_13455	0.72	-0.9
2,828,001	-		OH686_13455	0.72	-0.2
2,828,001	-		OH686_13455	0.72	-0.4
2,828,158	+		OH686_13455	0.84	+0.6
2,828,158	+		OH686_13455	0.84	-1.5
2,828,159	-		OH686_13455	0.84	-1.3
2,828,159	-		OH686_13455	0.84	-0.2
2,828,354	+				+0.3
2,828,355	-				+0.3
2,828,355	-				-0.0
2,828,355	-				-0.4
2,828,355	-				-0.0
2,828,355	-				-0.9
2,828,373	+				-0.7
2,828,374	-				+0.0
2,828,376	+				+0.3
2,828,376	+				-0.0
2,828,376	+				-0.3
2,828,377	-				+0.8
2,828,377	-				-0.7
2,828,377	-				+0.1
2,828,377	-				-0.6
2,828,377	-				+0.8
2,828,377	-				+0.6
2,828,377	-				-0.4
2,828,377	-				-0.5
2,828,377	-				+0.3
2,828,377	-				+1.0
2,828,396	+				-0.2
2,828,614	+		OH686_13460	0.13	+0.2
2,828,615	-		OH686_13460	0.13	-1.4
2,828,740	+		OH686_13460	0.23	+0.4
2,828,740	+		OH686_13460	0.23	-1.5
2,828,740	+		OH686_13460	0.23	-0.3
2,828,740	+		OH686_13460	0.23	-0.6
2,828,740	+		OH686_13460	0.23	+0.5
2,828,741	-		OH686_13460	0.23	-0.5
2,828,741	-		OH686_13460	0.23	+0.2
2,828,741	-		OH686_13460	0.23	+0.5
2,828,741	-		OH686_13460	0.23	-1.2
2,828,741	-		OH686_13460	0.23	+1.6
2,828,741	-		OH686_13460	0.23	-1.0
2,828,741	-		OH686_13460	0.23	+0.9
2,828,741	-		OH686_13460	0.23	-0.7
2,828,741	-		OH686_13460	0.23	-0.6
2,829,196	+		OH686_13460	0.58	-0.5
2,829,196	+		OH686_13460	0.58	-1.2
2,829,196	+		OH686_13460	0.58	-0.8
2,829,265	+		OH686_13460	0.63	-0.2
2,829,265	+		OH686_13460	0.63	-1.0
2,829,265	+		OH686_13460	0.63	-0.7
2,829,266	-		OH686_13460	0.63	+0.1
2,829,266	-		OH686_13460	0.63	-0.5
2,829,283	+		OH686_13460	0.64	-2.2
2,829,283	+		OH686_13460	0.64	-0.7
2,829,283	+		OH686_13460	0.64	-2.0
2,829,284	-		OH686_13460	0.65	-1.0
2,829,284	-		OH686_13460	0.65	-1.1
2,829,508	+		OH686_13460	0.82	+1.1
2,829,508	+		OH686_13460	0.82	+0.3
2,829,508	+		OH686_13460	0.82	+1.3
2,829,508	+		OH686_13460	0.82	-0.3
2,829,508	+		OH686_13460	0.82	-1.8
2,829,508	+		OH686_13460	0.82	+0.1
2,829,508	+		OH686_13460	0.82	-1.2
2,829,508	+		OH686_13460	0.82	+0.1
2,829,508	+		OH686_13460	0.82	-0.3
2,829,508	+		OH686_13460	0.82	-0.5
2,829,508	+		OH686_13460	0.82	+0.1
2,829,508	+		OH686_13460	0.82	-2.1
2,829,508	+		OH686_13460	0.82	+0.7
2,829,508	+		OH686_13460	0.82	-0.7
2,829,508	+		OH686_13460	0.82	-0.0
2,829,508	+		OH686_13460	0.82	-0.7
2,829,508	+		OH686_13460	0.82	+1.3
2,829,509	-		OH686_13460	0.82	-1.6
2,829,509	-		OH686_13460	0.82	-0.6
2,829,509	-		OH686_13460	0.82	-0.8
2,829,509	-		OH686_13460	0.82	-0.9
2,829,509	-		OH686_13460	0.82	-0.0
2,829,509	-		OH686_13460	0.82	-0.3
2,829,509	-		OH686_13460	0.82	+0.5
2,829,509	-		OH686_13460	0.82	+0.8
2,829,542	-		OH686_13460	0.84	-1.1
2,829,626	-				-1.6
2,829,658	+				-0.7
2,829,658	+				-1.1
2,829,659	-				+1.0
2,829,659	-				+1.6
2,829,748	+				+0.3
2,829,748	+				-1.0
2,829,748	+				-0.1
2,829,748	+				-0.7
2,829,748	+				-0.3
2,829,748	+				-2.7
2,829,748	+				+0.3
2,829,748	+				+0.3
2,829,748	+				-1.1
2,829,748	+				-0.4
2,829,748	+				-0.5
2,829,748	+				+1.2
2,829,749	-				-0.8
2,829,749	-				+0.1
2,829,749	-				+0.8
2,829,749	-				+0.1
2,829,749	-				+0.7
2,829,749	-				-0.8
2,829,749	-				+0.3
2,829,749	-				-0.8
2,829,749	-				+0.5
2,829,749	-				+0.3
2,829,841	+				-0.2
2,829,841	+				-0.4
2,829,842	-				-0.1
2,829,842	-				+0.6
2,829,890	+		OH686_13465	0.16	+1.5
2,829,904	+		OH686_13465	0.18	-0.4
2,829,904	+		OH686_13465	0.18	-1.0
2,829,904	+		OH686_13465	0.18	+0.1
2,829,904	+		OH686_13465	0.18	-0.1
2,829,904	+		OH686_13465	0.18	+0.4
2,829,904	+		OH686_13465	0.18	-0.1
2,829,904	+		OH686_13465	0.18	+0.4
2,829,904	+		OH686_13465	0.18	+1.2
2,829,904	+		OH686_13465	0.18	+0.4
2,829,904	+		OH686_13465	0.18	-0.2
2,829,904	+		OH686_13465	0.18	-0.4
2,829,904	+		OH686_13465	0.18	-0.6
2,829,904	+		OH686_13465	0.18	+0.1
2,829,904	+		OH686_13465	0.18	+0.2
2,829,904	+		OH686_13465	0.18	+0.6
2,829,904	+		OH686_13465	0.18	+0.1
2,829,904	+		OH686_13465	0.18	+0.4
2,829,904	+		OH686_13465	0.18	+0.4
2,829,904	+		OH686_13465	0.18	-0.8
2,829,904	+		OH686_13465	0.18	-0.5
2,829,904	+		OH686_13465	0.18	-0.3
2,829,904	+		OH686_13465	0.18	-0.2
2,829,904	+		OH686_13465	0.18	+0.3
2,829,905	-		OH686_13465	0.18	+0.1
2,829,905	-		OH686_13465	0.18	+0.3
2,829,905	-		OH686_13465	0.18	+0.3
2,829,905	-		OH686_13465	0.18	-1.3
2,829,905	-		OH686_13465	0.18	-0.7
2,829,905	-		OH686_13465	0.18	-0.9
2,829,905	-		OH686_13465	0.18	+0.5
2,829,905	-		OH686_13465	0.18	+1.3
2,829,905	-		OH686_13465	0.18	-0.1
2,829,905	-		OH686_13465	0.18	+0.3
2,829,905	-		OH686_13465	0.18	-0.5
2,829,905	-		OH686_13465	0.18	+1.1
2,829,905	-		OH686_13465	0.18	-0.8
2,829,905	-		OH686_13465	0.18	+0.1
2,829,905	-		OH686_13465	0.18	-0.4
2,829,905	-		OH686_13465	0.18	+0.7
2,829,905	-		OH686_13465	0.18	-0.9
2,829,905	-		OH686_13465	0.18	+0.1
2,829,905	-		OH686_13465	0.18	-0.6
2,829,905	-		OH686_13465	0.18	-0.4
2,829,905	-		OH686_13465	0.18	-0.4
2,829,905	-		OH686_13465	0.18	+0.5
2,829,905	-		OH686_13465	0.18	-0.7
2,829,905	-		OH686_13465	0.18	+0.2
2,829,905	-		OH686_13465	0.18	+0.2
2,829,949	+		OH686_13465	0.24	+0.2
2,829,949	+		OH686_13465	0.24	-0.1
2,829,949	+		OH686_13465	0.24	+0.3
2,829,949	+		OH686_13465	0.24	+0.2
2,829,949	+		OH686_13465	0.24	-0.3
2,829,949	+		OH686_13465	0.24	-0.1
2,829,949	+		OH686_13465	0.24	+0.4
2,829,949	+		OH686_13465	0.24	-0.4
2,829,949	+		OH686_13465	0.24	+0.6
2,829,950	-		OH686_13465	0.24	+0.8
2,829,950	-		OH686_13465	0.24	-0.5
2,829,950	-		OH686_13465	0.24	-0.4
2,829,950	-		OH686_13465	0.24	+0.2
2,829,950	-		OH686_13465	0.24	-0.7
2,829,950	-		OH686_13465	0.24	-0.3
2,829,950	-		OH686_13465	0.24	-0.1
2,829,950	-		OH686_13465	0.24	+0.3
2,829,950	-		OH686_13465	0.24	-0.1
2,829,950	-		OH686_13465	0.24	+0.3
2,829,950	-		OH686_13465	0.24	-0.8
2,829,950	-		OH686_13465	0.24	+0.2
2,829,950	-		OH686_13465	0.24	+1.0
2,829,971	+		OH686_13465	0.27	-1.1
2,829,971	+		OH686_13465	0.27	-1.8
2,829,971	+		OH686_13465	0.27	+0.5
2,829,971	+		OH686_13465	0.27	-1.3
2,829,972	-		OH686_13465	0.27	+0.5
2,829,972	-		OH686_13465	0.27	+0.2
2,829,991	+		OH686_13465	0.30	+0.5
2,830,165	+		OH686_13465	0.55	+0.4
2,830,165	+		OH686_13465	0.55	-0.6
2,830,165	+		OH686_13465	0.55	-2.4
2,830,165	+		OH686_13465	0.55	-0.7
2,830,165	+		OH686_13465	0.55	+0.2
2,830,165	+		OH686_13465	0.55	+0.1
2,830,165	+		OH686_13465	0.55	-0.0
2,830,165	+		OH686_13465	0.55	-2.2
2,830,165	+		OH686_13465	0.55	+0.9
2,830,165	+		OH686_13465	0.55	-1.7
2,830,165	+		OH686_13465	0.55	+0.2
2,830,165	+		OH686_13465	0.55	+0.0
2,830,165	+		OH686_13465	0.55	+0.1
2,830,165	+		OH686_13465	0.55	-0.2
2,830,165	+		OH686_13465	0.55	-0.8
2,830,166	-		OH686_13465	0.56	-1.1
2,830,166	-		OH686_13465	0.56	-0.1
2,830,166	-		OH686_13465	0.56	-0.9
2,830,166	-		OH686_13465	0.56	-0.1
2,830,166	-		OH686_13465	0.56	+1.9
2,830,166	-		OH686_13465	0.56	-0.8
2,830,166	-		OH686_13465	0.56	-0.0
2,830,166	-		OH686_13465	0.56	+0.1
2,830,166	-		OH686_13465	0.56	-0.0
2,830,166	-		OH686_13465	0.56	-0.1
2,830,166	-		OH686_13465	0.56	-0.1
2,830,166	-		OH686_13465	0.56	+0.1
2,830,391	-		OH686_13465	0.88	+0.3
2,830,508	+				+0.2
2,830,508	+				+0.3
2,830,508	+				-1.3
2,830,508	+				-2.1
2,830,508	+				-0.0
2,830,508	+				+0.9
2,830,509	-				-0.9
2,830,509	-				-0.0
2,830,509	-				-1.4
2,830,509	-				+0.3
2,830,509	-				-0.1
2,830,509	-				-1.1
2,830,509	-				-0.4
2,830,509	-				+0.3
2,830,512	+				+0.5
2,830,522	-				-0.6
2,830,522	-				+0.6
2,830,522	-				+1.0
2,830,561	-				+0.3
2,830,561	-				-0.4
2,830,561	-				+0.3
2,830,561	-				+0.2
2,830,572	+				-0.6
2,830,573	-				-0.6