Strain Fitness in Pseudomonas sp. S08-1 around OH686_13425

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
2,819,973	+		OH686_13420	0.48	-0.5
2,819,973	+		OH686_13420	0.48	-2.1
2,820,015	+		OH686_13420	0.51	-0.3
2,820,015	+		OH686_13420	0.51	-0.6
2,820,015	+		OH686_13420	0.51	-0.0
2,820,015	+		OH686_13420	0.51	-0.6
2,820,015	+		OH686_13420	0.51	-0.2
2,820,015	+		OH686_13420	0.51	+1.3
2,820,016	-		OH686_13420	0.51	-0.9
2,820,016	-		OH686_13420	0.51	-1.4
2,820,016	-		OH686_13420	0.51	-0.5
2,820,016	-		OH686_13420	0.51	-0.8
2,820,016	-		OH686_13420	0.51	-0.5
2,820,016	-		OH686_13420	0.51	-1.6
2,820,162	+		OH686_13420	0.60	-0.5
2,820,162	+		OH686_13420	0.60	-0.8
2,820,162	+		OH686_13420	0.60	-0.7
2,820,162	+		OH686_13420	0.60	-0.6
2,820,162	+		OH686_13420	0.60	-0.5
2,820,162	+		OH686_13420	0.60	-0.1
2,820,162	+		OH686_13420	0.60	-0.5
2,820,162	+		OH686_13420	0.60	-2.2
2,820,162	+		OH686_13420	0.60	+0.7
2,820,162	+		OH686_13420	0.60	-2.0
2,820,162	+		OH686_13420	0.60	-0.0
2,820,163	-		OH686_13420	0.60	-1.0
2,820,163	-		OH686_13420	0.60	-0.9
2,820,163	-		OH686_13420	0.60	+0.1
2,820,163	-		OH686_13420	0.60	-1.0
2,820,163	-		OH686_13420	0.60	+1.3
2,820,163	-		OH686_13420	0.60	+0.4
2,820,175	-		OH686_13420	0.60	+0.9
2,820,175	-		OH686_13420	0.60	-0.9
2,820,175	-		OH686_13420	0.60	-1.4
2,820,175	-		OH686_13420	0.60	+2.5
2,820,250	-		OH686_13420	0.65	-0.9
2,820,279	+		OH686_13420	0.67	-0.4
2,820,279	+		OH686_13420	0.67	-1.6
2,820,279	+		OH686_13420	0.67	-0.3
2,820,279	+		OH686_13420	0.67	-0.5
2,820,279	+		OH686_13420	0.67	-0.8
2,820,279	+		OH686_13420	0.67	-0.3
2,820,279	+		OH686_13420	0.67	-0.7
2,820,279	+		OH686_13420	0.67	-1.4
2,820,280	-		OH686_13420	0.67	-0.2
2,820,280	-		OH686_13420	0.67	+0.6
2,820,280	-		OH686_13420	0.67	-0.9
2,820,633	+		OH686_13420	0.88	-1.4
2,820,633	+		OH686_13420	0.88	+0.0
2,820,633	+		OH686_13420	0.88	-0.2
2,820,633	+		OH686_13420	0.88	-0.3
2,820,634	-		OH686_13420	0.88	-0.3
2,820,634	-		OH686_13420	0.88	-0.9
2,820,634	-		OH686_13420	0.88	-0.2
2,820,634	-		OH686_13420	0.88	+0.3
2,820,634	-		OH686_13420	0.88	-0.1
2,820,634	-		OH686_13420	0.88	-1.6
2,820,639	+		OH686_13420	0.88	+0.7
2,820,640	-		OH686_13420	0.88	+0.3
2,820,640	-		OH686_13420	0.88	-0.0
2,820,640	-		OH686_13420	0.88	+0.7
2,820,680	+				-0.3
2,820,680	+				+0.9
2,820,680	+				-0.6
2,820,681	-				-0.6
2,820,681	-				+0.7
2,820,681	-				-0.5
2,820,681	-				+0.1
2,820,684	+				-1.8
2,820,684	+				-0.3
2,820,684	+				-0.3
2,820,684	+				-0.6
2,820,684	+				-0.5
2,820,684	+				-1.7
2,820,684	+				+0.6
2,820,684	+				-0.2
2,820,684	+				-0.0
2,820,684	+				-0.8
2,820,685	-				+0.7
2,820,685	-				+0.8
2,820,685	-				-0.2
2,820,685	-				+0.8
2,820,685	-				+0.3
2,820,685	-				-0.5
2,820,685	-				-0.7
2,820,685	-				+0.9
2,820,685	-				-0.5
2,820,685	-				-1.0
2,820,685	-				-2.7
2,820,685	-				+1.6
2,820,685	-				-0.8
2,820,735	+				-0.0
2,820,736	-				-0.4
2,820,736	-				+0.9
2,820,736	-				-0.0
2,820,736	-				+1.6
2,820,819	+				-1.6
2,820,819	+				-1.0
2,820,819	+				+0.6
2,820,819	+				-0.6
2,820,819	+				+0.4
2,820,819	+				-1.1
2,820,819	+				-1.6
2,820,820	-				+1.3
2,820,820	-				+0.4
2,820,820	-				+0.3
2,820,820	-				-0.5
2,820,820	-				+0.5
2,820,899	+				+1.3
2,820,904	+				+0.1
2,820,904	+				+2.9
2,820,905	-				+0.3
2,820,905	-				+0.3
2,820,930	+				-0.2
2,820,930	+				+0.2
2,820,930	+				+0.3
2,820,930	+				+0.4
2,820,930	+				+0.6
2,820,930	+				-1.2
2,820,930	+				-0.0
2,820,930	+				-0.9
2,820,931	-				-0.7
2,820,931	-				+0.3
2,820,931	-				-0.5
2,820,931	-				+0.1
2,820,931	-				-0.0
2,820,931	-				-1.3
2,820,931	-				-0.2
2,821,035	-		OH686_13425	0.14	+1.3
2,821,214	+		OH686_13425	0.36	-1.7
2,821,214	+		OH686_13425	0.36	-1.3
2,821,214	+		OH686_13425	0.36	+1.9
2,821,214	+		OH686_13425	0.36	+0.2
2,821,214	+		OH686_13425	0.36	-0.9
2,821,214	+		OH686_13425	0.36	-1.0
2,821,214	+		OH686_13425	0.36	-0.0
2,821,214	+		OH686_13425	0.36	-1.7
2,821,214	+		OH686_13425	0.36	+0.1
2,821,215	-		OH686_13425	0.36	-1.4
2,821,215	-		OH686_13425	0.36	+0.3
2,821,215	-		OH686_13425	0.36	-1.0
2,821,298	+		OH686_13425	0.46	-0.3
2,821,298	+		OH686_13425	0.46	-0.7
2,821,298	+		OH686_13425	0.46	-0.7
2,821,298	+		OH686_13425	0.46	+1.0
2,821,298	+		OH686_13425	0.46	-0.5
2,821,298	+		OH686_13425	0.46	-2.0
2,821,299	-		OH686_13425	0.46	-1.2
2,821,299	-		OH686_13425	0.46	-0.3
2,821,299	-		OH686_13425	0.46	+0.0
2,821,299	-		OH686_13425	0.46	-0.3
2,821,299	-		OH686_13425	0.46	-0.7
2,821,299	-		OH686_13425	0.46	-1.5
2,821,313	+		OH686_13425	0.47	+0.3
2,821,474	+		OH686_13425	0.67	+0.1
2,821,565	+		OH686_13425	0.78	-0.5
2,821,565	+		OH686_13425	0.78	+0.1
2,821,565	+		OH686_13425	0.78	-0.7
2,821,565	+		OH686_13425	0.78	+0.1
2,821,566	-		OH686_13425	0.78	-0.1
2,821,583	+		OH686_13425	0.80	-1.4
2,821,583	+		OH686_13425	0.80	-0.1
2,821,583	+		OH686_13425	0.80	-2.2
2,821,583	+		OH686_13425	0.80	+0.7
2,821,583	+		OH686_13425	0.80	-0.3
2,821,583	+		OH686_13425	0.80	-0.2
2,821,583	+		OH686_13425	0.80	-0.0
2,821,583	+		OH686_13425	0.80	-0.0
2,821,583	+		OH686_13425	0.80	-0.5
2,821,584	-		OH686_13425	0.80	-0.5
2,821,584	-		OH686_13425	0.80	-1.2
2,821,584	-		OH686_13425	0.80	+1.1
2,821,584	-		OH686_13425	0.80	-1.2
2,821,584	-		OH686_13425	0.80	-0.7
2,821,584	-		OH686_13425	0.80	-0.3
2,821,584	-		OH686_13425	0.80	-1.6
2,821,637	+		OH686_13425	0.86	-0.3
2,821,637	+		OH686_13425	0.86	+0.1
2,821,637	+		OH686_13425	0.86	-0.1
2,821,652	+		OH686_13425	0.88	-2.2
2,821,652	+		OH686_13425	0.88	-0.5
2,821,652	+		OH686_13425	0.88	-1.0
2,821,652	+		OH686_13425	0.88	-0.8
2,821,652	+		OH686_13425	0.88	+1.0
2,821,652	+		OH686_13425	0.88	+0.3
2,821,652	+		OH686_13425	0.88	-1.2
2,821,652	+		OH686_13425	0.88	+0.3
2,821,652	+		OH686_13425	0.88	-0.3
2,821,652	+		OH686_13425	0.88	-0.7
2,821,652	+		OH686_13425	0.88	-0.3
2,821,652	+		OH686_13425	0.88	+0.5
2,821,652	+		OH686_13425	0.88	-0.5
2,821,652	+		OH686_13425	0.88	-0.5
2,821,653	-		OH686_13425	0.88	-0.2
2,821,653	-		OH686_13425	0.88	-0.8
2,821,653	-		OH686_13425	0.88	+0.5
2,821,653	-		OH686_13425	0.88	-0.1
2,821,653	-		OH686_13425	0.88	-0.6
2,821,653	-		OH686_13425	0.88	+0.3
2,821,653	-		OH686_13425	0.88	-1.3
2,821,653	-		OH686_13425	0.88	-1.2
2,821,653	-		OH686_13425	0.88	-0.0
2,821,653	-		OH686_13425	0.88	-1.4
2,821,653	-		OH686_13425	0.88	-0.1
2,821,653	-		OH686_13425	0.88	-0.3
2,821,653	-		OH686_13425	0.88	-0.2
2,821,653	-		OH686_13425	0.88	+0.5
2,821,727	+				+0.7
2,821,727	+				-0.9
2,821,727	+				+0.5
2,821,728	-				+0.3
2,821,728	-				-0.0
2,821,764	+				+1.4
2,821,764	+				-0.2
2,821,764	+				-1.1
2,821,764	+				-0.2
2,821,764	+				-1.3
2,821,764	+				+0.2
2,821,764	+				+0.2
2,821,764	+				+0.8
2,821,764	+				-2.0
2,821,764	+				-0.3
2,821,764	+				-0.8
2,821,764	+				+0.3
2,821,764	+				-0.5
2,821,765	-				-0.4
2,821,765	-				+0.2
2,821,765	-				+0.1
2,821,765	-				-0.0
2,821,765	-				-1.1
2,821,765	-				-0.8
2,821,765	-				-0.7
2,821,765	-				-1.7
2,821,765	-				+0.1
2,821,765	-				-0.5
2,821,765	-				-0.4
2,821,765	-				+0.3
2,821,765	-				-0.8
2,821,765	-				+0.0
2,821,765	-				+0.6
2,821,765	-				-0.0
2,821,765	-				+0.5
2,821,765	-				-0.5
2,821,765	-				+0.0
2,821,765	-				-0.9
2,821,791	+				-0.1
2,821,791	+				-0.3
2,821,792	-				-0.5
2,821,792	-				-0.3
2,822,451	+		OH686_13430	0.89	-0.3
2,822,451	+		OH686_13430	0.89	+0.4
2,822,451	+		OH686_13430	0.89	-0.0
2,822,451	+		OH686_13430	0.89	+0.3
2,822,451	+		OH686_13430	0.89	+0.2
2,822,451	+		OH686_13430	0.89	-0.0
2,822,451	+		OH686_13430	0.89	-0.3
2,822,451	+		OH686_13430	0.89	+0.6
2,822,451	+		OH686_13430	0.89	-1.5
2,822,451	+		OH686_13430	0.89	-0.7
2,822,451	+		OH686_13430	0.89	+1.0
2,822,451	+		OH686_13430	0.89	+0.2
2,822,451	+		OH686_13430	0.89	-1.9
2,822,451	+		OH686_13430	0.89	+0.2
2,822,452	-		OH686_13430	0.89	-1.2
2,822,452	-		OH686_13430	0.89	-0.5
2,822,452	-		OH686_13430	0.89	+0.4
2,822,452	-		OH686_13430	0.89	-1.4
2,822,452	-		OH686_13430	0.89	-0.4
2,822,452	-		OH686_13430	0.89	+0.2
2,822,527	-				+0.6
2,822,617	+				-0.5
2,822,617	+				+0.8
2,822,617	+				-0.0
2,822,617	+				-0.6
2,822,617	+				+0.4
2,822,617	+				+0.7
2,822,617	+				+1.9
2,822,617	+				-0.6
2,822,617	+				-1.1
2,822,617	+				+0.5
2,822,617	+				-0.3
2,822,617	+				+0.4
2,822,617	+				-1.0
2,822,617	+				+0.2
2,822,617	+				-0.3
2,822,617	+				-1.1
2,822,617	+				-0.2
2,822,617	+				+0.4
2,822,617	+				+0.9
2,822,617	+				-0.7
2,822,617	+				-0.5
2,822,617	+				+0.7
2,822,617	+				-0.4
2,822,617	+				-1.5
2,822,617	+				-0.3
2,822,617	+				-0.4
2,822,617	+				+0.3
2,822,618	-				-0.6
2,822,618	-				-0.1
2,822,618	-				-0.6
2,822,618	-				-1.0
2,822,618	-				+0.2
2,822,618	-				-0.2
2,822,618	-				+0.7
2,822,618	-				-0.7
2,822,618	-				+0.3
2,822,618	-				-0.8
2,822,618	-				+0.2
2,822,618	-				-0.3
2,822,618	-				+1.1
2,822,618	-				+0.1
2,822,618	-				-0.1
2,822,618	-				+0.5
2,822,618	-				-0.3
2,822,618	-				+0.5
2,822,618	-				+0.3
2,822,618	-				+0.5
2,822,618	-				+0.1