Strain Fitness in Pseudomonas sp. S08-1 around OH686_13410

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
2,814,836	+		OH686_13405	0.44	+1.3
2,814,836	+		OH686_13405	0.44	+0.2
2,814,890	+		OH686_13405	0.49	+0.3
2,814,890	+		OH686_13405	0.49	-0.8
2,814,890	+		OH686_13405	0.49	-0.5
2,814,891	-		OH686_13405	0.49	-0.2
2,814,891	-		OH686_13405	0.49	-0.0
2,814,891	-		OH686_13405	0.49	-0.5
2,815,017	+		OH686_13405	0.58	+0.5
2,815,017	+		OH686_13405	0.58	+0.2
2,815,017	+		OH686_13405	0.58	-0.6
2,815,017	+		OH686_13405	0.58	-2.5
2,815,017	+		OH686_13405	0.58	+0.3
2,815,017	+		OH686_13405	0.58	-0.5
2,815,018	-		OH686_13405	0.58	+0.1
2,815,018	-		OH686_13405	0.58	-0.2
2,815,018	-		OH686_13405	0.58	+0.7
2,815,018	-		OH686_13405	0.58	+0.0
2,815,018	-		OH686_13405	0.58	-0.0
2,815,018	-		OH686_13405	0.58	-0.9
2,815,247	+		OH686_13405	0.76	-1.2
2,815,247	+		OH686_13405	0.76	+0.5
2,815,247	+		OH686_13405	0.76	-0.1
2,815,247	+		OH686_13405	0.76	-0.3
2,815,247	+		OH686_13405	0.76	-0.4
2,815,248	-		OH686_13405	0.76	+0.0
2,815,248	-		OH686_13405	0.76	-0.1
2,815,248	-		OH686_13405	0.76	-0.2
2,815,248	-		OH686_13405	0.76	-2.0
2,815,248	-		OH686_13405	0.76	-0.4
2,815,289	+		OH686_13405	0.79	+0.7
2,815,289	+		OH686_13405	0.79	+0.4
2,815,289	+		OH686_13405	0.79	+0.2
2,815,289	+		OH686_13405	0.79	-0.8
2,815,289	+		OH686_13405	0.79	+0.6
2,815,289	+		OH686_13405	0.79	+0.3
2,815,289	+		OH686_13405	0.79	-0.6
2,815,289	+		OH686_13405	0.79	-1.7
2,815,289	+		OH686_13405	0.79	-0.2
2,815,289	+		OH686_13405	0.79	-1.3
2,815,289	+		OH686_13405	0.79	-0.4
2,815,290	-		OH686_13405	0.79	+1.4
2,815,290	-		OH686_13405	0.79	-0.2
2,815,290	-		OH686_13405	0.79	+0.4
2,815,290	-		OH686_13405	0.79	+0.1
2,815,290	-		OH686_13405	0.79	+0.1
2,815,290	-		OH686_13405	0.79	-0.1
2,815,290	-		OH686_13405	0.79	-0.1
2,815,290	-		OH686_13405	0.79	+0.8
2,815,290	-		OH686_13405	0.79	+0.4
2,815,290	-		OH686_13405	0.79	-0.3
2,815,290	-		OH686_13405	0.79	+0.4
2,815,290	-		OH686_13405	0.79	-0.4
2,815,391	+		OH686_13405	0.87	-1.0
2,815,391	+		OH686_13405	0.87	+0.6
2,815,391	+		OH686_13405	0.87	+0.6
2,815,391	+		OH686_13405	0.87	+1.2
2,815,391	+		OH686_13405	0.87	+1.5
2,815,391	+		OH686_13405	0.87	+0.5
2,815,391	+		OH686_13405	0.87	+0.1
2,815,392	-		OH686_13405	0.87	-1.2
2,815,392	-		OH686_13405	0.87	-0.4
2,815,392	-		OH686_13405	0.87	-0.6
2,815,392	-		OH686_13405	0.87	-0.3
2,815,392	-		OH686_13405	0.87	-0.4
2,815,392	-		OH686_13405	0.87	+0.7
2,815,392	-		OH686_13405	0.87	+0.2
2,815,392	-		OH686_13405	0.87	-0.2
2,815,392	-		OH686_13405	0.87	-0.0
2,815,403	+		OH686_13405	0.88	-0.5
2,815,404	-		OH686_13405	0.88	+0.2
2,815,475	+				+0.1
2,815,475	+				-0.0
2,815,475	+				-1.6
2,815,475	+				-0.0
2,815,476	-				+0.9
2,815,476	-				+0.1
2,815,476	-				+0.7
2,815,476	-				+2.0
2,815,476	-				+0.3
2,815,478	+				-0.6
2,815,478	+				-0.1
2,815,478	+				+0.8
2,815,478	+				-1.2
2,815,478	+				-0.5
2,815,478	+				+0.0
2,815,479	-				-1.4
2,815,479	-				-0.2
2,815,479	-				-0.6
2,815,479	-				+0.9
2,815,479	-				-2.2
2,815,479	-				+0.2
2,815,479	-				+1.1
2,815,479	-				+0.4
2,815,479	-				-0.4
2,815,479	-				+0.5
2,815,479	-				+0.4
2,815,479	-				+0.2
2,815,479	-				-0.5
2,815,620	+				+0.2
2,815,645	+				+0.2
2,815,645	+				-0.3
2,815,645	+				-0.3
2,815,645	+				-0.9
2,815,645	+				-1.7
2,815,646	-				-0.3
2,815,646	-				+0.3
2,815,646	-				+0.4
2,815,646	-				-0.5
2,815,663	+				+0.1
2,815,663	+				+0.2
2,815,663	+				+0.2
2,815,663	+				+0.8
2,815,663	+				+0.5
2,815,664	-				+1.3
2,815,669	+				-1.2
2,815,669	+				+0.0
2,815,669	+				-0.1
2,815,669	+				+1.1
2,815,669	+				+0.8
2,815,669	+				-1.1
2,815,669	+				+0.9
2,815,670	-				-0.7
2,815,670	-				+0.1
2,815,670	-				-0.1
2,815,670	-				+0.3
2,815,670	-				+0.5
2,815,670	-				-0.7
2,815,670	-				-0.3
2,815,670	-				-0.7
2,815,670	-				-0.5
2,815,703	+				-0.4
2,815,703	+				-0.5
2,815,703	+				-0.9
2,815,703	+				+0.0
2,815,704	-				-1.3
2,815,704	-				-0.0
2,815,704	-				+0.6
2,815,765	-				-0.5
2,815,765	-				+0.3
2,815,775	-				-0.5
2,815,811	+				-1.9
2,815,811	+				-1.2
2,815,812	-		OH686_13410	0.10	-1.4
2,815,812	-		OH686_13410	0.10	-0.9
2,815,831	-		OH686_13410	0.12	-0.2
2,815,898	+		OH686_13410	0.19	+0.3
2,815,898	+		OH686_13410	0.19	-1.3
2,815,898	+		OH686_13410	0.19	-1.4
2,815,898	+		OH686_13410	0.19	-1.6
2,815,898	+		OH686_13410	0.19	-1.3
2,815,898	+		OH686_13410	0.19	-0.8
2,815,899	-		OH686_13410	0.19	-1.2
2,815,899	-		OH686_13410	0.19	+0.1
2,815,899	-		OH686_13410	0.19	-2.7
2,815,899	-		OH686_13410	0.19	-1.7
2,815,899	-		OH686_13410	0.19	-1.4
2,815,899	-		OH686_13410	0.19	-0.8
2,815,899	-		OH686_13410	0.19	+0.3
2,815,899	-		OH686_13410	0.19	-0.4
2,815,900	+		OH686_13410	0.19	-0.5
2,815,900	+		OH686_13410	0.19	-1.7
2,815,900	+		OH686_13410	0.19	+0.7
2,815,900	+		OH686_13410	0.19	-2.5
2,815,900	+		OH686_13410	0.19	-1.4
2,815,900	+		OH686_13410	0.19	-1.6
2,815,900	+		OH686_13410	0.19	-1.3
2,815,900	+		OH686_13410	0.19	-1.0
2,815,900	+		OH686_13410	0.19	+0.2
2,815,900	+		OH686_13410	0.19	-1.0
2,815,900	+		OH686_13410	0.19	-1.0
2,815,900	+		OH686_13410	0.19	+0.7
2,815,900	+		OH686_13410	0.19	-0.7
2,815,900	+		OH686_13410	0.19	-0.3
2,815,900	+		OH686_13410	0.19	+0.3
2,815,900	+		OH686_13410	0.19	+0.0
2,815,900	+		OH686_13410	0.19	-0.7
2,815,901	-		OH686_13410	0.19	-1.7
2,815,901	-		OH686_13410	0.19	+0.8
2,815,901	-		OH686_13410	0.19	-1.0
2,815,901	-		OH686_13410	0.19	-1.1
2,815,901	-		OH686_13410	0.19	-0.7
2,815,901	-		OH686_13410	0.19	-0.4
2,815,901	-		OH686_13410	0.19	+0.7
2,815,901	-		OH686_13410	0.19	-1.6
2,815,901	-		OH686_13410	0.19	-0.6
2,815,901	-		OH686_13410	0.19	-1.1
2,815,901	-		OH686_13410	0.19	-0.9
2,815,901	-		OH686_13410	0.19	-0.5
2,815,901	-		OH686_13410	0.19	-1.7
2,815,901	-		OH686_13410	0.19	-0.4
2,815,901	-		OH686_13410	0.19	-1.6
2,815,901	-		OH686_13410	0.19	-0.5
2,815,901	-		OH686_13410	0.19	-1.0
2,815,910	+		OH686_13410	0.20	-0.3
2,815,911	-		OH686_13410	0.20	+1.1
2,816,051	+		OH686_13410	0.35	+0.6
2,816,052	-		OH686_13410	0.35	-2.6
2,816,052	-		OH686_13410	0.35	+0.4
2,816,179	+		OH686_13410	0.48	-1.5
2,816,180	-		OH686_13410	0.48	-0.6
2,816,273	+		OH686_13410	0.58	-1.0
2,816,273	+		OH686_13410	0.58	-1.0
2,816,273	+		OH686_13410	0.58	-1.9
2,816,273	+		OH686_13410	0.58	-1.2
2,816,273	+		OH686_13410	0.58	-0.7
2,816,273	+		OH686_13410	0.58	-2.2
2,816,273	+		OH686_13410	0.58	-1.4
2,816,273	+		OH686_13410	0.58	-1.6
2,816,274	-		OH686_13410	0.58	-1.0
2,816,274	-		OH686_13410	0.58	-0.1
2,816,274	-		OH686_13410	0.58	-0.6
2,816,274	-		OH686_13410	0.58	-0.3
2,816,279	+		OH686_13410	0.58	-1.1
2,816,279	+		OH686_13410	0.58	-1.9
2,816,279	+		OH686_13410	0.58	+0.5
2,816,280	-		OH686_13410	0.58	-0.7
2,816,280	-		OH686_13410	0.58	-0.0
2,816,280	-		OH686_13410	0.58	-2.0
2,816,280	-		OH686_13410	0.58	-0.2
2,816,405	+		OH686_13410	0.71	-0.6
2,816,406	-		OH686_13410	0.72	-0.4
2,816,522	+		OH686_13410	0.84	-2.1
2,816,522	+		OH686_13410	0.84	-1.0
2,816,522	+		OH686_13410	0.84	-0.8
2,816,522	+		OH686_13410	0.84	-1.4
2,816,523	-		OH686_13410	0.84	+0.4
2,816,523	-		OH686_13410	0.84	+0.4
2,816,523	-		OH686_13410	0.84	-1.1
2,816,624	+				-0.7
2,816,624	+				-0.7
2,816,624	+				-1.4
2,816,624	+				-0.8
2,816,624	+				-0.7
2,816,624	+				-0.1
2,816,624	+				-1.3
2,816,624	+				-0.6
2,816,625	-				-1.1
2,816,625	-				-1.4
2,816,625	-				-0.3
2,816,625	-				-1.0
2,816,625	-				-0.4
2,816,625	-				-0.9
2,816,625	-				-0.3
2,816,625	-				-0.4
2,816,625	-				-0.2
2,816,625	-				+0.6
2,816,625	-				-0.9
2,816,625	-				+0.3
2,816,625	-				-0.2
2,816,625	-				-0.8
2,816,625	-				-2.2
2,816,625	-				-0.6
2,816,625	-				+0.3
2,816,625	-				-0.5
2,816,625	-				-1.3
2,816,625	-				+1.1
2,816,625	-				-0.9
2,816,777	+				-2.4
2,816,778	-				+1.9
2,816,802	+				-0.1
2,816,812	+				-0.9
2,816,812	+				+0.4
2,816,812	+				+1.3
2,816,812	+				+1.9
2,816,812	+				-0.2
2,816,812	+				+0.1
2,816,813	-				+0.5
2,816,813	-				-0.5
2,816,813	-				-0.1
2,816,947	+				-0.7
2,816,981	+				-0.0
2,816,981	+				-0.2
2,816,982	-				-1.5
2,816,982	-				-0.7
2,816,982	-				-0.0
2,817,035	+				-0.5
2,817,036	-				-0.0
2,817,036	-				-1.4
2,817,044	+				-0.5
2,817,044	+				+0.4
2,817,044	+				-1.4
2,817,044	+				-0.7
2,817,044	+				+0.1
2,817,044	+				+0.4
2,817,044	+				-1.3
2,817,044	+				-0.5
2,817,044	+				-0.0
2,817,045	-				-1.2
2,817,045	-				-1.0
2,817,045	-				-1.6
2,817,045	-				-0.1
2,817,045	-				+0.4
2,817,045	-				-0.9
2,817,234	-		OH686_13415	0.16	-0.0
2,817,350	+		OH686_13415	0.22	-0.8
2,817,350	+		OH686_13415	0.22	-0.5
2,817,350	+		OH686_13415	0.22	-1.2
2,817,350	+		OH686_13415	0.22	+0.3
2,817,351	-		OH686_13415	0.22	+1.0
2,817,351	-		OH686_13415	0.22	-0.0
2,817,351	-		OH686_13415	0.22	-1.4
2,817,351	-		OH686_13415	0.22	+0.4
2,817,401	+		OH686_13415	0.24	-2.1
2,817,401	+		OH686_13415	0.24	+0.2
2,817,402	-		OH686_13415	0.24	-1.0
2,817,459	+		OH686_13415	0.26	-1.0
2,817,459	+		OH686_13415	0.26	+0.8
2,817,459	+		OH686_13415	0.26	-2.3
2,817,459	+		OH686_13415	0.26	-1.2
2,817,460	-		OH686_13415	0.26	+0.3