Strain Fitness in Pseudomonas sp. S08-1 around OH686_12425

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
2,615,447	+		OH686_12415	0.86	+0.5
2,615,447	+		OH686_12415	0.86	-0.1
2,615,447	+		OH686_12415	0.86	+0.4
2,615,448	-		OH686_12415	0.86	+0.2
2,615,448	-		OH686_12415	0.86	+0.6
2,615,448	-		OH686_12415	0.86	+0.3
2,615,448	-		OH686_12415	0.86	+0.6
2,615,448	-		OH686_12415	0.86	-1.8
2,615,576	+				+0.2
2,615,576	+				+0.8
2,615,577	-				-0.4
2,615,577	-				-1.1
2,615,615	+				-0.8
2,615,615	+				-0.8
2,615,616	-				-0.7
2,615,644	+		OH686_12420	0.12	+0.9
2,615,644	+		OH686_12420	0.12	+0.6
2,615,644	+		OH686_12420	0.12	+0.3
2,615,644	+		OH686_12420	0.12	+0.4
2,615,644	+		OH686_12420	0.12	-0.1
2,615,644	+		OH686_12420	0.12	+0.6
2,615,644	+		OH686_12420	0.12	-0.3
2,615,644	+		OH686_12420	0.12	+0.1
2,615,645	-		OH686_12420	0.12	+0.7
2,615,645	-		OH686_12420	0.12	-0.9
2,615,645	-		OH686_12420	0.12	+0.2
2,615,645	-		OH686_12420	0.12	-0.3
2,615,645	-		OH686_12420	0.12	-1.2
2,615,645	-		OH686_12420	0.12	+0.4
2,615,645	-		OH686_12420	0.12	+0.0
2,615,645	-		OH686_12420	0.12	+0.1
2,615,645	-		OH686_12420	0.12	-0.3
2,615,703	-		OH686_12420	0.22	+1.0
2,615,703	-		OH686_12420	0.22	-0.8
2,615,713	+		OH686_12420	0.24	+0.5
2,615,713	+		OH686_12420	0.24	-1.0
2,615,713	+		OH686_12420	0.24	+0.5
2,615,713	+		OH686_12420	0.24	+0.9
2,615,713	+		OH686_12420	0.24	-0.8
2,615,713	+		OH686_12420	0.24	+0.2
2,615,713	+		OH686_12420	0.24	+2.0
2,615,713	+		OH686_12420	0.24	-0.5
2,615,713	+		OH686_12420	0.24	-0.8
2,615,714	-		OH686_12420	0.24	-0.4
2,615,714	-		OH686_12420	0.24	-0.3
2,615,714	-		OH686_12420	0.24	+0.6
2,615,714	-		OH686_12420	0.24	+1.3
2,615,714	-		OH686_12420	0.24	+0.5
2,615,714	-		OH686_12420	0.24	+1.1
2,615,714	-		OH686_12420	0.24	-0.6
2,615,964	+		OH686_12420	0.68	+1.3
2,615,964	+		OH686_12420	0.68	+1.4
2,615,964	+		OH686_12420	0.68	-0.2
2,615,964	+		OH686_12420	0.68	-0.4
2,615,964	+		OH686_12420	0.68	-0.4
2,615,964	+		OH686_12420	0.68	-0.5
2,615,964	+		OH686_12420	0.68	+0.8
2,615,964	+		OH686_12420	0.68	-0.8
2,615,964	+		OH686_12420	0.68	+0.7
2,615,964	+		OH686_12420	0.68	-0.0
2,615,964	+		OH686_12420	0.68	-0.0
2,615,964	+		OH686_12420	0.68	-0.9
2,615,965	-		OH686_12420	0.68	+2.9
2,615,965	-		OH686_12420	0.68	+0.3
2,615,965	-		OH686_12420	0.68	+0.2
2,615,965	-		OH686_12420	0.68	-1.4
2,615,965	-		OH686_12420	0.68	+0.2
2,615,965	-		OH686_12420	0.68	+0.6
2,615,965	-		OH686_12420	0.68	+0.1
2,615,965	-		OH686_12420	0.68	-0.3
2,615,965	-		OH686_12420	0.68	-1.3
2,615,965	-		OH686_12420	0.68	-1.1
2,615,965	-		OH686_12420	0.68	-0.0
2,615,965	-		OH686_12420	0.68	-0.2
2,615,965	-		OH686_12420	0.68	+0.3
2,615,965	-		OH686_12420	0.68	-0.2
2,615,993	+		OH686_12420	0.73	-0.4
2,615,993	+		OH686_12420	0.73	+0.2
2,615,993	+		OH686_12420	0.73	-1.3
2,615,993	+		OH686_12420	0.73	-0.3
2,615,993	+		OH686_12420	0.73	+0.9
2,615,993	+		OH686_12420	0.73	+0.6
2,615,993	+		OH686_12420	0.73	+0.8
2,615,993	+		OH686_12420	0.73	+0.7
2,615,993	+		OH686_12420	0.73	-0.6
2,615,994	-		OH686_12420	0.74	+1.6
2,615,994	-		OH686_12420	0.74	-0.4
2,615,994	-		OH686_12420	0.74	-0.1
2,615,994	-		OH686_12420	0.74	+0.4
2,615,994	-		OH686_12420	0.74	-0.5
2,615,994	-		OH686_12420	0.74	-1.0
2,615,994	-		OH686_12420	0.74	-2.0
2,615,994	-		OH686_12420	0.74	-0.3
2,616,024	-		OH686_12420	0.79	+1.2
2,616,040	+		OH686_12420	0.82	+0.1
2,616,040	+		OH686_12420	0.82	+1.1
2,616,040	+		OH686_12420	0.82	-2.5
2,616,040	+		OH686_12420	0.82	-0.3
2,616,041	-		OH686_12420	0.82	-2.2
2,616,041	-		OH686_12420	0.82	-0.7
2,616,041	-		OH686_12420	0.82	-0.5
2,616,041	-		OH686_12420	0.82	-0.2
2,616,041	-		OH686_12420	0.82	+0.5
2,616,041	-		OH686_12420	0.82	+0.6
2,616,041	-		OH686_12420	0.82	+0.2
2,616,041	-		OH686_12420	0.82	-0.4
2,616,041	-		OH686_12420	0.82	+0.1
2,616,041	-		OH686_12420	0.82	+1.1
2,616,041	-		OH686_12420	0.82	-1.5
2,616,041	-		OH686_12420	0.82	+1.2
2,616,127	-				+0.8
2,616,127	-				-0.5
2,616,190	+				+1.3
2,616,223	+				+0.9
2,616,224	-				+0.4
2,616,264	+				+0.5
2,616,297	+				-0.5
2,616,326	+				-0.0
2,616,327	-				-0.0
2,616,327	-				+0.5
2,616,327	-				-0.3
2,616,353	+				-0.9
2,616,353	+				-1.2
2,616,353	+				-1.2
2,616,354	-				-4.0
2,616,354	-				-0.8
2,616,354	-				-1.1
2,616,354	-				-2.8
2,616,354	-				-2.0
2,616,354	-				-1.2
2,616,354	-				-2.2
2,616,354	-				-1.5
2,616,354	-				-2.3
2,616,439	+				-0.0
2,616,439	+				-3.1
2,616,439	+				-0.3
2,616,439	+				+0.1
2,616,439	+				-1.4
2,616,439	+				-0.7
2,616,439	+				-2.0
2,616,439	+				-0.6
2,616,439	+				-1.6
2,616,439	+				-0.5
2,616,439	+				-3.0
2,616,440	-				-2.7
2,616,440	-				-1.5
2,616,440	-				-2.4
2,616,440	-				-2.2
2,616,440	-				-3.0
2,616,440	-				-1.9
2,616,440	-				+0.8
2,616,487	+				-2.2
2,616,487	+				-3.7
2,616,487	+				-0.7
2,616,488	-				-1.5
2,616,488	-				-2.2
2,616,532	+		OH686_12425	0.13	-2.4
2,616,532	+		OH686_12425	0.13	-0.3
2,616,532	+		OH686_12425	0.13	-0.3
2,616,533	-		OH686_12425	0.14	-3.6
2,616,533	-		OH686_12425	0.14	-2.1
2,616,533	-		OH686_12425	0.14	-3.8
2,616,533	-		OH686_12425	0.14	-4.2
2,616,533	-		OH686_12425	0.14	-1.5
2,616,533	-		OH686_12425	0.14	-2.8
2,616,533	-		OH686_12425	0.14	+0.2
2,616,533	-		OH686_12425	0.14	-1.4
2,616,533	-		OH686_12425	0.14	-2.1
2,616,547	+		OH686_12425	0.15	-1.6
2,616,547	+		OH686_12425	0.15	-2.6
2,616,547	+		OH686_12425	0.15	-1.9
2,616,548	-		OH686_12425	0.15	-1.5
2,616,548	-		OH686_12425	0.15	-3.6
2,616,548	-		OH686_12425	0.15	-2.7
2,616,572	-		OH686_12425	0.17	-0.7
2,616,572	-		OH686_12425	0.17	-1.8
2,616,572	-		OH686_12425	0.17	-1.6
2,616,572	-		OH686_12425	0.17	-1.3
2,616,616	+		OH686_12425	0.20	-2.5
2,616,616	+		OH686_12425	0.20	-2.1
2,616,616	+		OH686_12425	0.20	-2.8
2,616,616	+		OH686_12425	0.20	-0.0
2,616,616	+		OH686_12425	0.20	-1.6
2,616,616	+		OH686_12425	0.20	-3.0
2,616,616	+		OH686_12425	0.20	-1.4
2,616,616	+		OH686_12425	0.20	-0.3
2,616,617	-		OH686_12425	0.20	-1.8
2,616,617	-		OH686_12425	0.20	-2.5
2,616,617	-		OH686_12425	0.20	+1.3
2,616,952	+		OH686_12425	0.48	-2.3
2,616,952	+		OH686_12425	0.48	-1.4
2,616,952	+		OH686_12425	0.48	-1.4
2,616,952	+		OH686_12425	0.48	-2.1
2,616,952	+		OH686_12425	0.48	-1.4
2,616,952	+		OH686_12425	0.48	-2.1
2,616,952	+		OH686_12425	0.48	-2.5
2,616,952	+		OH686_12425	0.48	+0.6
2,616,952	+		OH686_12425	0.48	-3.0
2,616,952	+		OH686_12425	0.48	-1.0
2,616,952	+		OH686_12425	0.48	-0.7
2,616,953	-		OH686_12425	0.48	+0.3
2,616,953	-		OH686_12425	0.48	-2.4
2,616,953	-		OH686_12425	0.48	-1.4
2,616,953	-		OH686_12425	0.48	-3.2
2,616,986	-		OH686_12425	0.50	-2.7
2,617,137	+		OH686_12425	0.63	+0.3
2,617,137	+		OH686_12425	0.63	-0.7
2,617,138	-		OH686_12425	0.63	-2.6
2,617,138	-		OH686_12425	0.63	-0.5
2,617,138	-		OH686_12425	0.63	+0.3
2,617,138	-		OH686_12425	0.63	-2.1
2,617,138	-		OH686_12425	0.63	-2.4
2,617,138	-		OH686_12425	0.63	-3.4
2,617,366	+		OH686_12425	0.81	-0.3
2,617,366	+		OH686_12425	0.81	-1.6
2,617,366	+		OH686_12425	0.81	-3.3
2,617,367	-		OH686_12425	0.81	-3.3
2,617,367	-		OH686_12425	0.81	-2.3
2,617,367	-		OH686_12425	0.81	-3.2
2,617,367	-		OH686_12425	0.81	-1.3
2,617,680	+		OH686_12430	0.11	-1.2
2,617,680	+		OH686_12430	0.11	-1.9
2,617,680	+		OH686_12430	0.11	-3.1
2,617,680	+		OH686_12430	0.11	-2.1
2,617,680	+		OH686_12430	0.11	+1.0
2,617,681	-		OH686_12430	0.11	-2.5
2,617,681	-		OH686_12430	0.11	-2.6
2,617,681	-		OH686_12430	0.11	-1.2
2,617,681	-		OH686_12430	0.11	-2.0
2,617,681	-		OH686_12430	0.11	-3.0
2,617,681	-		OH686_12430	0.11	-1.1
2,617,685	+		OH686_12430	0.11	-1.3
2,617,685	+		OH686_12430	0.11	+0.5
2,617,686	-		OH686_12430	0.11	-0.3
2,617,896	+		OH686_12430	0.37	-2.7
2,617,896	+		OH686_12430	0.37	-2.5
2,617,896	+		OH686_12430	0.37	-1.5
2,617,897	-		OH686_12430	0.38	+0.3
2,617,897	-		OH686_12430	0.38	+1.0
2,617,897	-		OH686_12430	0.38	-1.7
2,617,897	-		OH686_12430	0.38	-1.5
2,617,914	+		OH686_12430	0.40	-0.6
2,617,914	+		OH686_12430	0.40	-0.9
2,617,914	+		OH686_12430	0.40	-0.9
2,617,914	+		OH686_12430	0.40	-0.3
2,617,914	+		OH686_12430	0.40	-1.8
2,617,914	+		OH686_12430	0.40	-3.0
2,617,914	+		OH686_12430	0.40	+1.3
2,617,914	+		OH686_12430	0.40	-2.5
2,617,915	-		OH686_12430	0.40	-0.6
2,617,915	-		OH686_12430	0.40	-3.0
2,617,915	-		OH686_12430	0.40	-0.9
2,617,915	-		OH686_12430	0.40	-2.7
2,617,915	-		OH686_12430	0.40	+0.7
2,617,915	-		OH686_12430	0.40	-3.4
2,617,915	-		OH686_12430	0.40	-0.9
2,617,915	-		OH686_12430	0.40	-1.7
2,617,917	+		OH686_12430	0.40	-1.0
2,617,917	+		OH686_12430	0.40	-2.4
2,617,917	+		OH686_12430	0.40	-3.0
2,617,917	+		OH686_12430	0.40	-0.4
2,617,918	-		OH686_12430	0.40	-0.3
2,617,918	-		OH686_12430	0.40	-0.3
2,617,918	-		OH686_12430	0.40	-2.8
2,617,997	+		OH686_12430	0.50	-1.3
2,617,997	+		OH686_12430	0.50	-3.2
2,617,997	+		OH686_12430	0.50	-2.1
2,617,997	+		OH686_12430	0.50	-1.6
2,617,998	-		OH686_12430	0.50	-2.0
2,617,998	-		OH686_12430	0.50	-0.1
2,617,998	-		OH686_12430	0.50	-2.1
2,617,998	-		OH686_12430	0.50	-0.5
2,618,060	+		OH686_12430	0.58	-2.2
2,618,060	+		OH686_12430	0.58	-0.9
2,618,090	-		OH686_12430	0.61	-1.2
2,618,115	+		OH686_12430	0.64	-1.2
2,618,115	+		OH686_12430	0.64	-1.8
2,618,115	+		OH686_12430	0.64	-2.0
2,618,115	+		OH686_12430	0.64	-2.0
2,618,115	+		OH686_12430	0.64	+0.1
2,618,116	-		OH686_12430	0.65	-2.0
2,618,116	-		OH686_12430	0.65	-3.4
2,618,116	-		OH686_12430	0.65	-3.1
2,618,116	-		OH686_12430	0.65	-1.5
2,618,116	-		OH686_12430	0.65	-3.0
2,618,116	-		OH686_12430	0.65	-1.8
2,618,116	-		OH686_12430	0.65	-2.2
2,618,116	-		OH686_12430	0.65	-2.6
2,618,116	-		OH686_12430	0.65	-2.1
2,618,116	-		OH686_12430	0.65	-0.6
2,618,116	-		OH686_12430	0.65	-1.7
2,618,118	+		OH686_12430	0.65	-2.0
2,618,118	+		OH686_12430	0.65	-0.9
2,618,118	+		OH686_12430	0.65	-1.3
2,618,118	+		OH686_12430	0.65	-0.0
2,618,118	+		OH686_12430	0.65	-0.9
2,618,118	+		OH686_12430	0.65	-0.7
2,618,118	+		OH686_12430	0.65	-0.5
2,618,118	+		OH686_12430	0.65	+0.1
2,618,118	+		OH686_12430	0.65	-1.0
2,618,118	+		OH686_12430	0.65	-2.6
2,618,118	+		OH686_12430	0.65	-0.3
2,618,118	+		OH686_12430	0.65	-1.7
2,618,118	+		OH686_12430	0.65	-0.7
2,618,118	+		OH686_12430	0.65	-0.7
2,618,118	+		OH686_12430	0.65	-0.5
2,618,118	+		OH686_12430	0.65	-1.4
2,618,118	+		OH686_12430	0.65	-2.1
2,618,118	+		OH686_12430	0.65	+0.1
2,618,118	+		OH686_12430	0.65	-1.6
2,618,118	+		OH686_12430	0.65	-2.9
2,618,118	+		OH686_12430	0.65	-0.9
2,618,118	+		OH686_12430	0.65	-2.1
2,618,118	+		OH686_12430	0.65	-2.4
2,618,119	-		OH686_12430	0.65	-1.1
2,618,119	-		OH686_12430	0.65	-0.0
2,618,119	-		OH686_12430	0.65	-3.3
2,618,119	-		OH686_12430	0.65	-2.4
2,618,119	-		OH686_12430	0.65	-1.4
2,618,119	-		OH686_12430	0.65	-2.2
2,618,119	-		OH686_12430	0.65	-1.3
2,618,119	-		OH686_12430	0.65	-1.5
2,618,119	-		OH686_12430	0.65	-1.8
2,618,119	-		OH686_12430	0.65	-0.3
2,618,119	-		OH686_12430	0.65	-0.5
2,618,119	-		OH686_12430	0.65	-2.3
2,618,119	-		OH686_12430	0.65	-2.6
2,618,119	-		OH686_12430	0.65	-2.2
2,618,119	-		OH686_12430	0.65	-1.6
2,618,119	-		OH686_12430	0.65	-1.5
2,618,119	-		OH686_12430	0.65	-2.5
2,618,119	-		OH686_12430	0.65	+0.3
2,618,119	-		OH686_12430	0.65	-0.9
2,618,119	-		OH686_12430	0.65	-2.0
2,618,119	-		OH686_12430	0.65	+0.5
2,618,416	+				-0.3
2,618,416	+				+0.9
2,618,417	-				-0.0
2,618,450	+				+0.3
2,618,451	-				+0.0
2,618,457	+				-0.3
2,618,549	+				-0.8
2,618,549	+				+0.3
2,618,549	+				-0.0
2,618,549	+				-0.1
2,618,549	+				-1.2
2,618,549	+				-0.1
2,618,549	+				+0.4
2,618,549	+				+0.3
2,618,549	+				-1.1
2,618,549	+				-0.8
2,618,550	-				-0.3
2,618,550	-				-1.4
2,618,550	-				-0.0
2,618,550	-				-0.7
2,618,550	-				-1.1
2,618,585	+		OH686_12435	0.13	-0.3
2,618,585	+		OH686_12435	0.13	-0.2
2,618,585	+		OH686_12435	0.13	+1.0
2,618,585	+		OH686_12435	0.13	-0.3
2,618,585	+		OH686_12435	0.13	+1.3
2,618,585	+		OH686_12435	0.13	-0.0
2,618,585	+		OH686_12435	0.13	+0.5
2,618,585	+		OH686_12435	0.13	-1.2
2,618,585	+		OH686_12435	0.13	-0.4
2,618,585	+		OH686_12435	0.13	+0.5
2,618,585	+		OH686_12435	0.13	-0.7
2,618,586	-		OH686_12435	0.13	-0.3
2,618,586	-		OH686_12435	0.13	-1.0
2,618,586	-		OH686_12435	0.13	-0.0
2,618,586	-		OH686_12435	0.13	+0.9
2,618,586	-		OH686_12435	0.13	-1.2
2,618,586	-		OH686_12435	0.13	-1.2
2,618,586	-		OH686_12435	0.13	+0.2
2,618,586	-		OH686_12435	0.13	-0.7
2,618,586	-		OH686_12435	0.13	-0.0
2,618,586	-		OH686_12435	0.13	-0.9
2,618,586	-		OH686_12435	0.13	-0.3
2,618,586	-		OH686_12435	0.13	-1.0
2,618,586	-		OH686_12435	0.13	+0.0