Strain Fitness in Pseudomonas sp. S08-1 around OH686_12360

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
2,605,630	+				+2.0
2,605,630	+				-1.3
2,605,630	+				-0.7
2,605,630	+				+0.0
2,605,630	+				+0.4
2,605,631	-				+0.1
2,605,631	-				+0.4
2,605,631	-				+0.5
2,605,672	+				+0.2
2,605,672	+				+0.2
2,605,672	+				-0.8
2,605,672	+				-0.2
2,605,672	+				+0.5
2,605,672	+				+0.5
2,605,672	+				+0.4
2,605,673	-				-0.1
2,605,673	-				-0.7
2,605,673	-				-0.0
2,605,954	+		OH686_12350	0.66	-0.7
2,605,954	+		OH686_12350	0.66	-0.9
2,605,955	-		OH686_12350	0.67	-0.5
2,605,955	-		OH686_12350	0.67	-1.5
2,606,038	+		OH686_12350	0.84	+1.0
2,606,039	-		OH686_12350	0.84	+0.1
2,606,428	+				+0.5
2,606,663	+		OH686_12360	0.10	-0.4
2,606,663	+		OH686_12360	0.10	-0.2
2,606,663	+		OH686_12360	0.10	-2.0
2,606,663	+		OH686_12360	0.10	-1.7
2,606,663	+		OH686_12360	0.10	+1.9
2,606,663	+		OH686_12360	0.10	-0.5
2,606,663	+		OH686_12360	0.10	-0.8
2,606,663	+		OH686_12360	0.10	+1.2
2,606,663	+		OH686_12360	0.10	-1.6
2,606,663	+		OH686_12360	0.10	+0.0
2,606,663	+		OH686_12360	0.10	+0.5
2,606,663	+		OH686_12360	0.10	-1.3
2,606,663	+		OH686_12360	0.10	-0.4
2,606,663	+		OH686_12360	0.10	-0.3
2,606,663	+		OH686_12360	0.10	-0.3
2,606,664	-		OH686_12360	0.10	-1.6
2,606,664	-		OH686_12360	0.10	+1.2
2,606,664	-		OH686_12360	0.10	+0.3
2,606,664	-		OH686_12360	0.10	-0.9
2,606,664	-		OH686_12360	0.10	-0.7
2,606,664	-		OH686_12360	0.10	-0.4
2,606,664	-		OH686_12360	0.10	+0.4
2,606,664	-		OH686_12360	0.10	-1.1
2,606,664	-		OH686_12360	0.10	+1.6
2,606,664	-		OH686_12360	0.10	+0.4
2,606,664	-		OH686_12360	0.10	+0.7
2,606,664	-		OH686_12360	0.10	+0.7
2,606,664	-		OH686_12360	0.10	+0.1
2,606,664	-		OH686_12360	0.10	-0.1
2,606,664	-		OH686_12360	0.10	-0.7
2,606,669	+		OH686_12360	0.11	-0.0
2,606,669	+		OH686_12360	0.11	-0.8
2,606,669	+		OH686_12360	0.11	-1.0
2,606,669	+		OH686_12360	0.11	+0.3
2,606,669	+		OH686_12360	0.11	-2.0
2,606,669	+		OH686_12360	0.11	-0.3
2,606,669	+		OH686_12360	0.11	+1.5
2,606,669	+		OH686_12360	0.11	+0.2
2,606,669	+		OH686_12360	0.11	+0.2
2,606,669	+		OH686_12360	0.11	-0.7
2,606,669	+		OH686_12360	0.11	-0.2
2,606,670	-		OH686_12360	0.11	+1.4
2,606,670	-		OH686_12360	0.11	+0.6
2,606,670	-		OH686_12360	0.11	-0.4
2,606,670	-		OH686_12360	0.11	+0.2
2,606,670	-		OH686_12360	0.11	+0.2
2,606,670	-		OH686_12360	0.11	+0.1
2,606,670	-		OH686_12360	0.11	+0.7
2,606,670	-		OH686_12360	0.11	-0.0
2,606,670	-		OH686_12360	0.11	-0.1
2,606,670	-		OH686_12360	0.11	-0.2
2,606,670	-		OH686_12360	0.11	-1.2
2,606,670	-		OH686_12360	0.11	-0.0
2,606,670	-		OH686_12360	0.11	-2.6
2,606,672	+		OH686_12360	0.11	-0.5
2,606,700	+		OH686_12360	0.12	-0.5
2,606,700	+		OH686_12360	0.12	-0.1
2,606,701	-		OH686_12360	0.12	+0.7
2,606,701	-		OH686_12360	0.12	-0.6
2,606,701	-		OH686_12360	0.12	+1.0
2,606,712	+		OH686_12360	0.13	-0.0
2,606,712	+		OH686_12360	0.13	+0.3
2,606,712	+		OH686_12360	0.13	-0.5
2,606,712	+		OH686_12360	0.13	-0.2
2,606,712	+		OH686_12360	0.13	-0.4
2,606,712	+		OH686_12360	0.13	+0.6
2,606,713	-		OH686_12360	0.13	-1.9
2,606,713	-		OH686_12360	0.13	-1.3
2,606,933	+		OH686_12360	0.23	-1.0
2,606,933	+		OH686_12360	0.23	+0.1
2,606,933	+		OH686_12360	0.23	-0.0
2,606,934	-		OH686_12360	0.24	+1.3
2,606,934	-		OH686_12360	0.24	+0.4
2,606,934	-		OH686_12360	0.24	+0.9
2,606,934	-		OH686_12360	0.24	-0.4
2,607,213	+		OH686_12360	0.37	+0.8
2,607,213	+		OH686_12360	0.37	+1.1
2,607,263	+		OH686_12360	0.40	-0.3
2,607,264	-		OH686_12360	0.40	+0.6
2,607,264	-		OH686_12360	0.40	+0.6
2,607,264	-		OH686_12360	0.40	-0.7
2,607,340	-		OH686_12360	0.43	+0.3
2,607,374	+		OH686_12360	0.45	+0.6
2,607,458	+		OH686_12360	0.49	+0.6
2,607,458	+		OH686_12360	0.49	+0.6
2,607,459	-		OH686_12360	0.49	-0.8
2,607,459	-		OH686_12360	0.49	-0.0
2,607,488	+		OH686_12360	0.51	-0.9
2,607,488	+		OH686_12360	0.51	-2.1
2,607,488	+		OH686_12360	0.51	+0.0
2,607,488	+		OH686_12360	0.51	-0.7
2,607,489	-		OH686_12360	0.51	+1.0
2,607,489	-		OH686_12360	0.51	-0.2
2,607,489	-		OH686_12360	0.51	+0.6
2,607,659	+		OH686_12360	0.59	+1.6
2,607,659	+		OH686_12360	0.59	-0.3
2,607,659	+		OH686_12360	0.59	+0.3
2,607,659	+		OH686_12360	0.59	-2.7
2,607,660	-		OH686_12360	0.59	+1.0
2,607,660	-		OH686_12360	0.59	-0.1
2,607,776	+		OH686_12360	0.65	-2.1
2,607,776	+		OH686_12360	0.65	+0.3
2,607,785	+		OH686_12360	0.65	+0.7
2,607,785	+		OH686_12360	0.65	-1.5
2,607,785	+		OH686_12360	0.65	+0.5
2,607,785	+		OH686_12360	0.65	-0.3
2,607,785	+		OH686_12360	0.65	-0.7
2,607,785	+		OH686_12360	0.65	-0.9
2,607,785	+		OH686_12360	0.65	+0.1
2,607,785	+		OH686_12360	0.65	-0.0
2,607,786	-		OH686_12360	0.65	-1.1
2,607,786	-		OH686_12360	0.65	+0.6
2,607,786	-		OH686_12360	0.65	+0.5
2,607,786	-		OH686_12360	0.65	-0.5
2,607,786	-		OH686_12360	0.65	-0.1
2,607,786	-		OH686_12360	0.65	+0.6
2,607,786	-		OH686_12360	0.65	-0.5
2,607,786	-		OH686_12360	0.65	-1.1
2,607,786	-		OH686_12360	0.65	+0.5
2,607,786	-		OH686_12360	0.65	-1.1
2,607,786	-		OH686_12360	0.65	-1.0
2,607,786	-		OH686_12360	0.65	-1.3
2,607,786	-		OH686_12360	0.65	-0.3
2,607,786	-		OH686_12360	0.65	+0.4
2,607,786	-		OH686_12360	0.65	+0.6
2,607,786	-		OH686_12360	0.65	-1.0
2,607,818	+		OH686_12360	0.67	-1.2
2,607,818	+		OH686_12360	0.67	+1.6
2,607,818	+		OH686_12360	0.67	-0.4
2,607,818	+		OH686_12360	0.67	-0.1
2,607,819	-		OH686_12360	0.67	-0.5
2,607,819	-		OH686_12360	0.67	+0.0
2,607,819	-		OH686_12360	0.67	+0.4
2,607,819	-		OH686_12360	0.67	+0.3
2,607,819	-		OH686_12360	0.67	+0.5
2,607,819	-		OH686_12360	0.67	+0.8
2,607,833	+		OH686_12360	0.67	+0.4
2,607,833	+		OH686_12360	0.67	-0.9
2,607,833	+		OH686_12360	0.67	-0.5
2,607,834	-		OH686_12360	0.67	-0.2
2,607,834	-		OH686_12360	0.67	-0.2
2,607,834	-		OH686_12360	0.67	+0.3
2,607,836	+		OH686_12360	0.68	-2.6
2,607,836	+		OH686_12360	0.68	-0.0
2,607,836	+		OH686_12360	0.68	-0.9
2,607,836	+		OH686_12360	0.68	-0.7
2,607,836	+		OH686_12360	0.68	-0.4
2,607,836	+		OH686_12360	0.68	+0.4
2,607,836	+		OH686_12360	0.68	-0.2
2,607,837	-		OH686_12360	0.68	+0.8
2,607,837	-		OH686_12360	0.68	+1.3
2,607,837	-		OH686_12360	0.68	-1.5
2,607,837	-		OH686_12360	0.68	-1.2
2,607,837	-		OH686_12360	0.68	+1.0
2,607,837	-		OH686_12360	0.68	-0.6
2,607,837	-		OH686_12360	0.68	-1.9
2,608,163	+		OH686_12360	0.84	-1.4
2,608,163	+		OH686_12360	0.84	-0.3
2,608,163	+		OH686_12360	0.84	-0.8
2,608,163	+		OH686_12360	0.84	-1.0
2,608,163	+		OH686_12360	0.84	-1.6
2,608,164	-		OH686_12360	0.84	+0.3
2,608,164	-		OH686_12360	0.84	-0.5
2,608,164	-		OH686_12360	0.84	-1.0
2,608,164	-		OH686_12360	0.84	-0.9
2,608,205	+		OH686_12360	0.86	+0.1
2,608,206	-		OH686_12360	0.86	+0.2
2,608,206	-		OH686_12360	0.86	+1.5
2,608,206	-		OH686_12360	0.86	+0.7
2,608,235	+		OH686_12360	0.87	+1.2
2,608,235	+		OH686_12360	0.87	-1.8
2,608,235	+		OH686_12360	0.87	+0.8
2,608,236	-		OH686_12360	0.87	-2.0
2,608,260	+		OH686_12360	0.88	-0.9
2,608,260	+		OH686_12360	0.88	-0.4
2,608,260	+		OH686_12360	0.88	-0.3
2,608,260	+		OH686_12360	0.88	+0.7
2,608,260	+		OH686_12360	0.88	-0.3
2,608,260	+		OH686_12360	0.88	-0.0
2,608,261	-		OH686_12360	0.88	-0.5
2,608,261	-		OH686_12360	0.88	-1.0
2,608,261	-		OH686_12360	0.88	-0.7
2,608,261	-		OH686_12360	0.88	-0.5
2,608,261	-		OH686_12360	0.88	-0.2
2,608,261	-		OH686_12360	0.88	+1.3
2,608,261	-		OH686_12360	0.88	-1.6
2,608,454	+				+1.1
2,608,518	+				+0.4
2,608,518	+				-0.5
2,608,540	-				+0.3
2,608,549	+				+0.6
2,608,549	+				+0.3
2,608,549	+				+0.1
2,608,549	+				-1.0
2,608,549	+				+0.3
2,608,550	-				-0.0
2,608,550	-				-0.7
2,608,550	-				-0.0
2,608,550	-				+2.0
2,608,584	+				-0.6
2,608,584	+				-0.5
2,608,584	+				+0.3
2,608,584	+				+1.0
2,608,584	+				-0.4
2,608,584	+				-2.0
2,608,585	-				+0.3
2,608,585	-				+0.0
2,608,585	-				-0.3
2,608,585	-				+0.3
2,608,585	-				-0.2
2,608,585	-				+0.1
2,608,585	-				-0.2
2,608,585	-				-0.0
2,608,588	+				+0.9
2,608,588	+				-0.5
2,608,588	+				+1.0
2,608,588	+				+1.8
2,608,588	+				-0.4
2,608,588	+				+0.1
2,608,588	+				+0.7
2,608,588	+				+1.0
2,608,588	+				-1.2
2,608,588	+				-0.5
2,608,588	+				+0.0
2,608,588	+				-0.1
2,608,589	-				+0.4
2,608,589	-				+0.2
2,608,589	-				+0.8
2,608,622	-				-0.0
2,608,640	+				-0.4
2,608,640	+				-0.1
2,608,640	+				+1.7
2,608,640	+				-0.1
2,608,641	-				-0.6
2,608,762	+		OH686_12365	0.25	-0.8
2,608,763	-		OH686_12365	0.25	-0.5
2,608,866	+		OH686_12365	0.44	-0.3
2,608,948	+		OH686_12365	0.59	+0.3
2,608,948	+		OH686_12365	0.59	+0.5
2,609,037	-		OH686_12365	0.76	-0.1
2,609,042	+		OH686_12365	0.77	-0.7
2,609,042	+		OH686_12365	0.77	-0.6
2,609,042	+		OH686_12365	0.77	+0.9
2,609,042	+		OH686_12365	0.77	-0.4
2,609,042	+		OH686_12365	0.77	+0.2
2,609,042	+		OH686_12365	0.77	-0.7
2,609,042	+		OH686_12365	0.77	-0.8
2,609,042	+		OH686_12365	0.77	-0.2
2,609,042	+		OH686_12365	0.77	-0.2
2,609,043	+		OH686_12365	0.77	+0.1
2,609,043	-		OH686_12365	0.77	-0.2
2,609,043	-		OH686_12365	0.77	-1.5
2,609,043	-		OH686_12365	0.77	+1.2
2,609,043	-		OH686_12365	0.77	+0.2
2,609,043	-		OH686_12365	0.77	-0.2
2,609,043	-		OH686_12365	0.77	+0.6
2,609,043	-		OH686_12365	0.77	-0.2
2,609,043	-		OH686_12365	0.77	+0.4
2,609,043	-		OH686_12365	0.77	-0.8
2,609,043	-		OH686_12365	0.77	-0.5
2,609,043	-		OH686_12365	0.77	-0.8
2,609,043	-		OH686_12365	0.77	+0.3
2,609,043	-		OH686_12365	0.77	+0.3
2,609,043	-		OH686_12365	0.77	+1.0
2,609,105	+		OH686_12365	0.88	-0.2
2,609,106	-		OH686_12365	0.89	+0.1
2,609,106	-		OH686_12365	0.89	-0.0
2,609,106	-		OH686_12365	0.89	+0.7
2,609,106	-		OH686_12365	0.89	-0.7
2,609,106	-		OH686_12365	0.89	+0.0
2,609,120	+				-1.6
2,609,120	+				+0.5
2,609,120	+				-0.0
2,609,120	+				+0.0
2,609,120	+				+1.0
2,609,120	+				-0.7
2,609,120	+				+0.4
2,609,121	-				-0.3
2,609,121	-				-0.1
2,609,121	-				+0.0
2,609,121	-				+0.6
2,609,121	-				-0.5
2,609,121	-				+0.5
2,609,121	-				-0.5
2,609,121	-				+1.5
2,609,121	-				+0.1
2,609,121	-				-1.2
2,609,121	-				+0.6
2,609,121	-				-0.0
2,609,121	-				+0.7
2,609,121	-				+0.6
2,609,121	-				+0.1
2,609,157	-				-0.0
2,609,188	+				-0.5
2,609,220	-				-0.2
2,609,220	-				-0.3
2,609,317	+				-1.4
2,609,317	+				+0.2
2,609,317	+				+0.1
2,609,318	-				-0.3
2,609,318	-				+1.0
2,609,410	+		OH686_12370	0.17	-0.1
2,609,410	+		OH686_12370	0.17	-0.1
2,609,410	+		OH686_12370	0.17	-1.4
2,609,410	+		OH686_12370	0.17	-0.4
2,609,411	-		OH686_12370	0.17	+0.0
2,609,411	-		OH686_12370	0.17	+0.3