Strain Fitness in Pseudomonas sp. S08-1 around OH686_12195

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
2,577,876	+				+0.2
2,577,876	+				-0.8
2,577,876	+				+0.4
2,577,876	+				-0.5
2,577,876	+				+1.1
2,577,876	+				+0.9
2,577,877	-				+0.2
2,577,877	-				-0.4
2,577,877	-				-1.6
2,577,936	+				-1.5
2,577,936	+				-0.2
2,577,937	-				+0.2
2,577,937	-				+0.3
2,577,937	-				+0.3
2,577,937	-				-0.9
2,577,937	-				-0.7
2,577,937	-				+0.5
2,577,937	-				-0.6
2,577,943	+				+0.4
2,577,943	+				+0.4
2,577,943	+				+0.7
2,577,943	+				+0.7
2,577,944	-				+0.8
2,577,944	-				+1.3
2,577,944	-				+0.3
2,577,944	-				-1.4
2,577,944	-				-1.0
2,577,944	-				-0.2
2,577,944	-				-0.0
2,577,944	-				+0.5
2,578,057	+		OH686_12190	0.14	+1.5
2,578,057	+		OH686_12190	0.14	-1.0
2,578,057	+		OH686_12190	0.14	+0.7
2,578,057	+		OH686_12190	0.14	-0.9
2,578,057	+		OH686_12190	0.14	+0.3
2,578,057	+		OH686_12190	0.14	-0.1
2,578,058	-		OH686_12190	0.15	+0.3
2,578,058	-		OH686_12190	0.15	+0.2
2,578,058	-		OH686_12190	0.15	+0.1
2,578,058	-		OH686_12190	0.15	+0.1
2,578,058	-		OH686_12190	0.15	+0.4
2,578,224	+		OH686_12190	0.34	+0.1
2,578,224	+		OH686_12190	0.34	-0.5
2,578,224	+		OH686_12190	0.34	-0.0
2,578,224	+		OH686_12190	0.34	+0.2
2,578,225	-		OH686_12190	0.34	-0.3
2,578,225	-		OH686_12190	0.34	+0.2
2,578,225	-		OH686_12190	0.34	-0.2
2,578,225	-		OH686_12190	0.34	+0.0
2,578,225	-		OH686_12190	0.34	+0.3
2,578,225	-		OH686_12190	0.34	+0.4
2,578,225	-		OH686_12190	0.34	-0.4
2,578,225	-		OH686_12190	0.34	-0.3
2,578,225	-		OH686_12190	0.34	+0.4
2,578,225	-		OH686_12190	0.34	+0.5
2,578,225	-		OH686_12190	0.34	-0.4
2,578,225	-		OH686_12190	0.34	-0.4
2,578,225	-		OH686_12190	0.34	+0.3
2,578,437	+		OH686_12190	0.59	-0.3
2,578,438	-		OH686_12190	0.59	+0.5
2,578,457	+		OH686_12190	0.62	-0.2
2,578,457	+		OH686_12190	0.62	+0.1
2,578,457	+		OH686_12190	0.62	-0.0
2,578,457	+		OH686_12190	0.62	+0.1
2,578,457	+		OH686_12190	0.62	-0.3
2,578,458	-		OH686_12190	0.62	-0.3
2,578,458	-		OH686_12190	0.62	-0.8
2,578,458	-		OH686_12190	0.62	-0.1
2,578,458	-		OH686_12190	0.62	+0.6
2,578,488	+		OH686_12190	0.65	-0.3
2,578,488	+		OH686_12190	0.65	+0.5
2,578,488	+		OH686_12190	0.65	-0.3
2,578,489	-		OH686_12190	0.65	-0.3
2,578,489	-		OH686_12190	0.65	+0.6
2,578,489	-		OH686_12190	0.65	+0.3
2,578,489	-		OH686_12190	0.65	+0.1
2,578,539	+		OH686_12190	0.71	+0.4
2,578,539	+		OH686_12190	0.71	+0.5
2,578,539	+		OH686_12190	0.71	-0.2
2,578,539	+		OH686_12190	0.71	-0.9
2,578,539	+		OH686_12190	0.71	+0.5
2,578,539	+		OH686_12190	0.71	-0.1
2,578,539	+		OH686_12190	0.71	-1.5
2,578,540	-		OH686_12190	0.72	-1.2
2,578,540	-		OH686_12190	0.72	+0.5
2,578,540	-		OH686_12190	0.72	-0.3
2,578,623	+		OH686_12190	0.81	+0.8
2,578,623	+		OH686_12190	0.81	-0.1
2,578,623	+		OH686_12190	0.81	+1.5
2,578,623	+		OH686_12190	0.81	-0.4
2,578,623	+		OH686_12190	0.81	+0.2
2,578,623	+		OH686_12190	0.81	+0.1
2,578,623	+		OH686_12190	0.81	-0.2
2,578,623	+		OH686_12190	0.81	+1.3
2,578,623	+		OH686_12190	0.81	+0.9
2,578,623	+		OH686_12190	0.81	+1.1
2,578,623	+		OH686_12190	0.81	-0.5
2,578,624	-		OH686_12190	0.81	+0.1
2,578,624	-		OH686_12190	0.81	-0.7
2,578,624	-		OH686_12190	0.81	-1.1
2,578,624	-		OH686_12190	0.81	+1.0
2,578,624	-		OH686_12190	0.81	-0.4
2,578,624	-		OH686_12190	0.81	-1.0
2,578,624	-		OH686_12190	0.81	-1.0
2,578,632	+		OH686_12190	0.82	-1.4
2,578,633	-		OH686_12190	0.83	+0.6
2,578,784	+				-0.7
2,578,784	+				-0.1
2,578,784	+				-0.2
2,578,785	-				+1.6
2,578,785	-				-0.4
2,578,785	-				-0.8
2,578,785	-				+0.0
2,578,785	-				+0.4
2,578,785	-				-1.1
2,578,785	-				+0.0
2,578,785	-				-0.9
2,578,785	-				-0.1
2,578,788	+				+0.6
2,578,788	+				-0.5
2,578,788	+				-0.4
2,578,788	+				-0.4
2,578,788	+				-2.0
2,578,788	+				-0.6
2,578,788	+				+1.0
2,578,789	-				-0.0
2,578,789	-				-0.5
2,578,879	+		OH686_12195	0.14	+0.1
2,578,879	+		OH686_12195	0.14	-1.4
2,578,879	+		OH686_12195	0.14	-0.7
2,578,921	+		OH686_12195	0.21	-1.5
2,578,922	-		OH686_12195	0.21	-0.0
2,579,242	+		OH686_12195	0.72	+1.1
2,579,243	-		OH686_12195	0.72	-1.6
2,579,243	-		OH686_12195	0.72	+0.3
2,579,243	-		OH686_12195	0.72	+1.9
2,579,243	-		OH686_12195	0.72	-0.5
2,579,261	-		OH686_12195	0.75	-0.0
2,579,329	+		OH686_12195	0.85	-0.0
2,579,415	-				-0.7
2,579,415	-				+0.9
2,579,502	+				-0.4
2,579,502	+				+0.7
2,579,502	+				-0.0
2,579,503	-				-0.0
2,579,503	-				-1.2
2,579,503	-				-0.7
2,579,503	-				-0.5
2,579,503	-				-0.4
2,579,579	+				+0.3
2,579,580	-				+0.2
2,579,580	-				-0.7
2,579,580	-				-0.0
2,579,580	-				+0.3
2,579,634	+				-0.1
2,579,634	+				-0.5
2,579,634	+				-1.2
2,579,634	+				+0.3
2,579,634	+				-0.5
2,579,634	+				+0.3
2,579,634	+				-0.1
2,579,634	+				+0.1
2,579,634	+				+0.7
2,579,634	+				+1.0
2,579,634	+				+1.9
2,579,634	+				-0.2
2,579,634	+				-0.7
2,579,634	+				-0.5
2,579,634	+				+1.5
2,579,634	+				-0.2
2,579,634	+				+0.5
2,579,634	+				+0.0
2,579,635	-				-0.3
2,579,635	-				+0.1
2,579,635	-				-0.5
2,579,635	-				-1.5
2,579,635	-				+0.1
2,579,635	-				+0.1
2,579,635	-				+1.0
2,579,635	-				+2.3
2,579,635	-				-0.7
2,579,635	-				+0.2
2,579,635	-				+0.2
2,579,635	-				-1.5
2,579,643	+				+0.7
2,579,643	+				-1.4
2,579,644	-				+0.4
2,579,644	-				+0.9
2,579,644	-				-1.2
2,579,644	-				+0.2
2,579,644	-				-0.1
2,579,644	-				+0.0
2,579,644	-				-0.8
2,579,699	+				+0.6
2,579,699	+				+1.3
2,579,700	-				-0.3
2,579,700	-				-1.0
2,579,711	+				+0.5
2,579,711	+				+0.2
2,579,711	+				+2.5
2,579,711	+				-0.0
2,579,712	-				-0.4
2,579,712	-				-0.1
2,579,712	-				-0.9
2,579,712	-				-0.4
2,579,712	-				-0.1
2,579,850	-		OH686_12200	0.22	+0.3
2,579,850	-		OH686_12200	0.22	-0.7
2,580,033	-		OH686_12200	0.50	+1.3
2,580,349	+				+0.3
2,580,381	-				+0.5
2,580,386	+				+0.5
2,580,387	-				-0.0
2,580,387	-				-0.0
2,580,387	-				+0.3
2,580,387	-				+1.6
2,580,387	-				+0.3
2,580,387	-				+1.1
2,580,387	-				+1.3
2,580,387	-				-0.5
2,580,387	-				+0.5
2,580,387	-				-0.3
2,580,390	+				-0.5
2,580,391	-				+0.1
2,580,391	-				+0.1
2,580,391	-				+0.5
2,580,391	-				+1.1
2,580,391	-				+0.7
2,580,391	-				-1.4
2,580,391	-				+1.8
2,580,391	-				+0.7
2,580,391	-				-0.3
2,580,391	-				+0.6
2,580,391	-				+0.5
2,580,391	-				-1.3
2,580,391	-				+0.7
2,580,391	-				+0.3
2,580,399	-				-0.9
2,580,406	+				+1.9
2,580,407	-				-0.3
2,580,407	-				+0.8
2,580,407	-				+0.5