Strain Fitness in Pseudomonas sp. S08-1 around OH686_11420

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
2,350,884	+		OH686_11410	0.61	-0.1
2,350,884	+		OH686_11410	0.61	-0.6
2,350,884	+		OH686_11410	0.61	+0.4
2,350,884	+		OH686_11410	0.61	-0.1
2,350,885	-		OH686_11410	0.61	+0.3
2,351,210	+		OH686_11410	0.89	-0.1
2,351,210	+		OH686_11410	0.89	-2.6
2,351,210	+		OH686_11410	0.89	+0.5
2,351,210	+		OH686_11410	0.89	+0.4
2,351,210	+		OH686_11410	0.89	+1.4
2,351,210	+		OH686_11410	0.89	+0.2
2,351,210	+		OH686_11410	0.89	-0.2
2,351,210	+		OH686_11410	0.89	-0.1
2,351,210	+		OH686_11410	0.89	+0.1
2,351,210	+		OH686_11410	0.89	+0.9
2,351,210	+		OH686_11410	0.89	-0.3
2,351,210	+		OH686_11410	0.89	-0.8
2,351,210	+		OH686_11410	0.89	+0.7
2,351,211	-		OH686_11410	0.89	-0.2
2,351,211	-		OH686_11410	0.89	+0.0
2,351,211	-		OH686_11410	0.89	-1.9
2,351,211	-		OH686_11410	0.89	-0.5
2,351,211	-		OH686_11410	0.89	-0.1
2,351,211	-		OH686_11410	0.89	-0.2
2,351,211	-		OH686_11410	0.89	+0.2
2,351,212	+		OH686_11410	0.89	-0.5
2,351,213	-		OH686_11410	0.89	-1.7
2,351,213	-		OH686_11410	0.89	+0.9
2,351,213	-		OH686_11410	0.89	+0.4
2,351,244	-				-0.1
2,351,244	-				+0.5
2,351,258	+				+0.1
2,351,258	+				-0.2
2,351,258	+				+0.2
2,351,258	+				+0.4
2,351,258	+				+0.2
2,351,258	+				-0.3
2,351,258	+				-0.9
2,351,258	+				+0.1
2,351,258	+				-0.0
2,351,258	+				-0.7
2,351,258	+				-0.5
2,351,258	+				-0.3
2,351,259	-				+0.2
2,351,259	-				+0.7
2,351,259	-				+0.3
2,351,259	-				-0.3
2,351,259	-				+0.2
2,351,259	-				-0.9
2,351,259	-				+0.3
2,351,259	-				-0.8
2,351,259	-				+1.1
2,351,259	-				-0.8
2,351,259	-				-0.9
2,351,259	-				+1.4
2,351,259	-				+0.2
2,351,259	-				-0.2
2,351,261	-				-0.8
2,351,350	+				-1.2
2,351,350	+				+0.7
2,351,350	+				-0.5
2,351,350	+				-0.5
2,351,350	+				-0.7
2,351,350	+				-1.0
2,351,350	+				-0.3
2,351,351	-				+1.4
2,351,351	-				-0.4
2,351,351	-				+1.2
2,351,351	-				-1.3
2,351,351	-				-0.1
2,351,351	-				+0.2
2,351,351	-				-0.2
2,351,351	-				+1.5
2,351,351	-				-0.7
2,351,390	+		OH686_11415	0.10	-0.5
2,351,390	+		OH686_11415	0.10	+0.0
2,351,390	+		OH686_11415	0.10	+0.7
2,351,390	+		OH686_11415	0.10	+0.0
2,351,390	+		OH686_11415	0.10	-0.8
2,351,391	-		OH686_11415	0.11	+1.4
2,351,391	-		OH686_11415	0.11	-0.1
2,351,419	+		OH686_11415	0.17	-0.3
2,351,419	+		OH686_11415	0.17	+0.4
2,351,420	-		OH686_11415	0.17	-0.4
2,351,422	+		OH686_11415	0.17	+0.4
2,351,422	+		OH686_11415	0.17	-0.3
2,351,422	+		OH686_11415	0.17	-0.3
2,351,422	+		OH686_11415	0.17	+0.3
2,351,422	+		OH686_11415	0.17	+0.1
2,351,423	-		OH686_11415	0.18	-0.9
2,351,423	-		OH686_11415	0.18	+1.0
2,351,505	+		OH686_11415	0.35	-0.8
2,351,722	+		OH686_11415	0.81	-0.0
2,351,722	+		OH686_11415	0.81	-0.5
2,351,722	+		OH686_11415	0.81	+0.1
2,351,723	-		OH686_11415	0.82	+0.4
2,351,723	-		OH686_11415	0.82	+0.2
2,351,723	-		OH686_11415	0.82	+0.4
2,351,723	-		OH686_11415	0.82	+0.1
2,351,723	-		OH686_11415	0.82	-0.6
2,351,723	-		OH686_11415	0.82	-1.4
2,351,723	-		OH686_11415	0.82	-0.3
2,351,723	-		OH686_11415	0.82	+0.5
2,351,723	-		OH686_11415	0.82	+1.3
2,351,724	+		OH686_11415	0.82	-1.1
2,351,724	+		OH686_11415	0.82	-0.3
2,351,724	+		OH686_11415	0.82	+0.1
2,351,725	-		OH686_11415	0.82	+1.3
2,351,725	-		OH686_11415	0.82	-1.7
2,351,725	-		OH686_11415	0.82	-1.3
2,351,725	-		OH686_11415	0.82	+1.6
2,351,725	-		OH686_11415	0.82	-1.5
2,351,725	-		OH686_11415	0.82	+0.1
2,351,725	-		OH686_11415	0.82	-1.6
2,351,725	-		OH686_11415	0.82	-0.5
2,351,725	-		OH686_11415	0.82	-0.7
2,351,725	-		OH686_11415	0.82	-1.0
2,351,939	+		OH686_11420	0.19	-2.6
2,351,939	+		OH686_11420	0.19	-0.8
2,351,939	+		OH686_11420	0.19	-0.6
2,351,939	+		OH686_11420	0.19	-2.8
2,351,939	+		OH686_11420	0.19	-1.5
2,351,939	+		OH686_11420	0.19	-2.3
2,351,939	+		OH686_11420	0.19	-0.9
2,351,939	+		OH686_11420	0.19	-1.3
2,351,939	+		OH686_11420	0.19	-2.4
2,351,939	+		OH686_11420	0.19	-2.4
2,351,940	-		OH686_11420	0.19	-1.7
2,351,940	-		OH686_11420	0.19	-1.8
2,351,940	-		OH686_11420	0.19	-2.1
2,351,940	-		OH686_11420	0.19	-1.2
2,351,940	-		OH686_11420	0.19	-0.6
2,351,940	-		OH686_11420	0.19	-0.1
2,351,945	+		OH686_11420	0.20	-0.9
2,351,945	+		OH686_11420	0.20	-1.3
2,351,945	+		OH686_11420	0.20	-3.2
2,351,945	+		OH686_11420	0.20	-0.0
2,351,945	+		OH686_11420	0.20	-2.1
2,351,945	+		OH686_11420	0.20	-0.5
2,351,946	-		OH686_11420	0.20	-3.5
2,351,946	-		OH686_11420	0.20	-1.2
2,351,946	-		OH686_11420	0.20	-2.8
2,352,014	+		OH686_11420	0.31	-1.6
2,352,015	-		OH686_11420	0.31	-3.3
2,352,044	+		OH686_11420	0.35	-0.9
2,352,045	-		OH686_11420	0.35	-1.1
2,352,299	+		OH686_11420	0.74	-1.5
2,352,299	+		OH686_11420	0.74	-1.9
2,352,300	-		OH686_11420	0.74	-1.2
2,352,300	-		OH686_11420	0.74	-1.7
2,352,329	+		OH686_11420	0.79	-1.1
2,352,338	+		OH686_11420	0.80	-2.6
2,352,338	+		OH686_11420	0.80	-1.1
2,352,338	+		OH686_11420	0.80	-1.5
2,352,338	+		OH686_11420	0.80	-0.8
2,352,338	+		OH686_11420	0.80	-2.0
2,352,338	+		OH686_11420	0.80	-1.2
2,352,338	+		OH686_11420	0.80	-1.7
2,352,338	+		OH686_11420	0.80	-0.4
2,352,339	-		OH686_11420	0.80	-2.7
2,352,339	-		OH686_11420	0.80	-1.4
2,352,339	-		OH686_11420	0.80	-0.9
2,352,363	-		OH686_11420	0.84	-0.6
2,352,477	-				-0.7
2,352,640	+				-0.5
2,352,640	+				+0.4
2,352,640	+				+1.2
2,352,640	+				-0.3
2,352,641	-				+0.5
2,352,641	-				-0.4
2,352,641	-				+0.5
2,352,641	-				-0.5
2,352,765	-		OH686_11425	0.31	-0.1
2,352,998	+		OH686_11425	0.80	-1.1
2,352,998	+		OH686_11425	0.80	+0.2
2,352,998	+		OH686_11425	0.80	-0.6
2,352,999	-		OH686_11425	0.80	+0.4
2,352,999	-		OH686_11425	0.80	+1.0
2,352,999	-		OH686_11425	0.80	-0.4
2,352,999	-		OH686_11425	0.80	+0.1
2,352,999	-		OH686_11425	0.80	-1.1
2,352,999	-		OH686_11425	0.80	+1.0
2,353,020	+		OH686_11425	0.85	+0.2
2,353,020	+		OH686_11425	0.85	+1.2
2,353,020	+		OH686_11425	0.85	-1.2
2,353,020	+		OH686_11425	0.85	+0.2
2,353,020	+		OH686_11425	0.85	-0.6
2,353,020	+		OH686_11425	0.85	-0.1
2,353,021	-		OH686_11425	0.85	+1.2
2,353,021	-		OH686_11425	0.85	+0.7
2,353,043	+		OH686_11425	0.89	-1.2
2,353,044	-		OH686_11425	0.90	-0.4
2,353,065	+				+1.0
2,353,065	+				+0.4
2,353,066	-				+0.2
2,353,147	+				+0.2
2,353,147	+				-0.6
2,353,148	-				+0.7
2,353,233	+				+0.7
2,353,233	+				+0.7
2,353,233	+				+0.3
2,353,398	+		OH686_11430	0.12	+0.3
2,353,398	+		OH686_11430	0.12	+0.4
2,353,398	+		OH686_11430	0.12	+1.5
2,353,398	+		OH686_11430	0.12	+0.4
2,353,398	+		OH686_11430	0.12	+0.9
2,353,398	+		OH686_11430	0.12	+0.6
2,353,398	+		OH686_11430	0.12	+1.1
2,353,398	+		OH686_11430	0.12	+0.5
2,353,398	+		OH686_11430	0.12	+0.7
2,353,398	+		OH686_11430	0.12	+0.2
2,353,398	+		OH686_11430	0.12	+0.9
2,353,398	+		OH686_11430	0.12	+1.2
2,353,399	-		OH686_11430	0.13	+0.7
2,353,399	-		OH686_11430	0.13	+0.9
2,353,399	-		OH686_11430	0.13	+0.9
2,353,399	-		OH686_11430	0.13	+1.0
2,353,399	-		OH686_11430	0.13	+0.6
2,353,399	-		OH686_11430	0.13	-0.8
2,353,399	-		OH686_11430	0.13	+0.9
2,353,399	-		OH686_11430	0.13	+0.8
2,353,399	-		OH686_11430	0.13	+1.0
2,353,399	-		OH686_11430	0.13	+1.0
2,353,399	-		OH686_11430	0.13	+1.2
2,353,399	-		OH686_11430	0.13	+0.8
2,353,399	-		OH686_11430	0.13	+0.8
2,353,399	-		OH686_11430	0.13	+1.0
2,353,404	+		OH686_11430	0.13	-0.1
2,353,404	+		OH686_11430	0.13	+0.8
2,353,404	+		OH686_11430	0.13	+0.7
2,353,404	+		OH686_11430	0.13	+1.0
2,353,404	+		OH686_11430	0.13	+0.8
2,353,405	-		OH686_11430	0.13	+2.1
2,353,405	-		OH686_11430	0.13	+1.0
2,353,405	-		OH686_11430	0.13	+1.9
2,353,405	-		OH686_11430	0.13	+1.3
2,353,405	-		OH686_11430	0.13	+0.2
2,353,405	-		OH686_11430	0.13	+0.7
2,353,405	-		OH686_11430	0.13	+1.0
2,353,405	-		OH686_11430	0.13	+0.4
2,353,405	-		OH686_11430	0.13	+0.5
2,353,405	-		OH686_11430	0.13	-2.4
2,353,405	-		OH686_11430	0.13	+0.1
2,353,405	-		OH686_11430	0.13	+1.1
2,353,405	-		OH686_11430	0.13	+1.3
2,353,405	-		OH686_11430	0.13	+0.7
2,353,405	-		OH686_11430	0.13	+0.8
2,353,405	-		OH686_11430	0.13	+0.5
2,353,405	-		OH686_11430	0.13	+1.4
2,353,405	-		OH686_11430	0.13	+1.4
2,353,405	-		OH686_11430	0.13	+0.9