Strain Fitness in Pseudomonas sp. S08-1 around OH686_11275

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
2,321,526	-				+0.2
2,321,537	-				+0.2
2,321,537	-				-0.9
2,321,537	-				-0.4
2,321,537	-				-0.5
2,321,537	-				+0.4
2,321,537	-				-0.9
2,321,541	-				+0.2
2,321,541	-				-0.3
2,321,541	-				-0.5
2,321,541	-				-0.5
2,321,541	-				+0.4
2,321,541	-				+1.5
2,321,541	-				-0.8
2,321,541	-				+0.4
2,321,541	-				-0.4
2,321,541	-				-0.1
2,321,541	-				+0.5
2,321,541	-				-0.4
2,321,541	-				+1.0
2,321,541	-				-0.7
2,321,541	-				-0.2
2,321,541	-				+0.2
2,321,541	-				-0.1
2,321,541	-				-1.7
2,321,541	-				-0.9
2,321,541	-				-0.2
2,321,541	-				-1.3
2,321,541	-				+1.2
2,321,541	-				-0.6
2,321,541	-				+0.7
2,321,543	-				+0.6
2,321,543	-				+0.3
2,321,543	-				-0.6
2,321,543	-				-0.2
2,321,543	-				+0.1
2,321,543	-				-0.4
2,321,543	-				-1.7
2,321,543	-				+0.2
2,321,543	-				+0.4
2,321,543	-				+0.0
2,321,543	-				+0.8
2,321,543	-				-0.2
2,321,543	-				-0.4
2,321,543	-				-0.9
2,321,610	+				+1.6
2,321,611	-				+2.2
2,321,611	-				+0.2
2,321,611	-				-1.1
2,321,611	-				-0.6
2,321,677	+				+1.2
2,321,678	-				-0.1
2,321,678	-				+1.2
2,321,678	-				-0.2
2,321,678	-				+2.2
2,321,678	-				-0.7
2,321,678	-				+1.0
2,321,732	+				-0.4
2,321,743	+				-1.1
2,321,743	+				-0.7
2,321,743	+				-1.2
2,321,743	+				-1.0
2,321,743	+				+0.6
2,321,743	+				-0.8
2,321,743	+				+0.7
2,321,743	+				-0.1
2,321,743	+				+0.5
2,321,743	+				+1.2
2,321,743	+				+0.5
2,321,743	+				-1.0
2,321,744	-				-0.3
2,321,744	-				+0.2
2,321,744	-				+0.5
2,321,744	-				-0.7
2,321,744	-				-0.1
2,321,744	-				-0.4
2,321,744	-				-1.3
2,321,744	-				+2.1
2,321,746	+				-0.0
2,321,746	+				+1.1
2,321,746	+				+0.3
2,321,746	+				+0.2
2,321,747	-				-0.2
2,321,747	-				+0.5
2,321,747	-				+0.1
2,321,747	-				-0.2
2,321,747	-				+0.2
2,321,747	-				+0.5
2,321,747	-				+0.6
2,321,763	+				-1.2
2,321,763	+				-2.4
2,321,763	+				-0.1
2,321,763	+				-0.1
2,321,763	+				-0.3
2,321,763	+				+0.3
2,321,763	+				+0.6
2,321,763	+				-0.9
2,321,763	+				+0.4
2,321,763	+				-0.5
2,321,763	+				+0.3
2,321,764	-				-1.4
2,321,764	-				-0.1
2,321,764	-				+0.3
2,321,764	-				-0.2
2,321,764	-				+0.3
2,321,764	-				-1.7
2,321,764	-				-0.0
2,321,764	-				+1.1
2,321,764	-				-0.5
2,321,764	-				-0.5
2,322,129	+				-0.9
2,322,191	+				+0.3
2,322,209	-				+0.3
2,322,209	-				+0.2
2,322,669	+		OH686_11275	0.25	-0.2
2,322,669	+		OH686_11275	0.25	-0.6
2,322,669	+		OH686_11275	0.25	-0.1
2,322,670	-		OH686_11275	0.25	-0.8
2,322,670	-		OH686_11275	0.25	-1.5
2,322,755	-		OH686_11275	0.30	+0.4
2,322,811	-		OH686_11275	0.34	-0.1
2,322,811	-		OH686_11275	0.34	-1.2
2,322,822	+		OH686_11275	0.35	-0.1
2,322,822	+		OH686_11275	0.35	-0.4
2,322,823	-		OH686_11275	0.35	-0.9
2,322,867	+		OH686_11275	0.38	+0.2
2,322,867	+		OH686_11275	0.38	-0.8
2,322,867	+		OH686_11275	0.38	-1.3
2,322,868	-		OH686_11275	0.38	+0.8
2,322,868	-		OH686_11275	0.38	-2.8
2,322,868	-		OH686_11275	0.38	-0.2
2,322,868	-		OH686_11275	0.38	+0.4
2,323,203	+		OH686_11275	0.60	+0.1
2,323,203	+		OH686_11275	0.60	-1.1
2,323,203	+		OH686_11275	0.60	-0.1
2,323,203	+		OH686_11275	0.60	-0.5
2,323,203	+		OH686_11275	0.60	+0.2
2,323,204	-		OH686_11275	0.60	-2.6
2,323,204	-		OH686_11275	0.60	+0.2
2,323,204	-		OH686_11275	0.60	+1.2
2,323,204	-		OH686_11275	0.60	-1.5
2,323,204	-		OH686_11275	0.60	-1.4
2,323,204	-		OH686_11275	0.60	+0.0
2,323,272	+		OH686_11275	0.65	-0.3
2,323,428	+		OH686_11275	0.75	-0.9
2,323,429	-		OH686_11275	0.75	-0.1
2,323,429	-		OH686_11275	0.75	+0.2
2,323,434	+		OH686_11275	0.76	-0.8
2,323,434	+		OH686_11275	0.76	+0.4
2,323,435	-		OH686_11275	0.76	+0.2
2,323,452	+		OH686_11275	0.77	-0.4
2,323,453	-		OH686_11275	0.77	-0.4
2,323,520	-		OH686_11275	0.81	-1.0
2,323,826	+				-0.5
2,323,826	+				+0.0
2,323,827	-				-1.1
2,323,827	-				+0.6
2,323,827	-				+0.3
2,323,827	-				-0.4
2,323,827	-				+0.1
2,323,860	+				-0.5
2,323,860	+				-1.9
2,323,860	+				-1.0
2,323,860	+				+0.5
2,323,861	-				+0.6
2,323,861	-				-0.3
2,323,861	-				-1.4
2,323,861	-				-0.3
2,323,861	-				-0.4
2,323,861	-				-0.1
2,323,861	-				-0.8
2,323,861	-				-0.8
2,323,927	-				-1.3
2,323,953	+				-1.5
2,323,953	+				-1.6
2,323,954	-				-1.3
2,323,954	-				-1.4
2,323,954	-				-4.4
2,323,954	-				-2.8
2,324,131	+		OH686_11280	0.22	-3.1
2,324,131	+		OH686_11280	0.22	-2.4
2,324,131	+		OH686_11280	0.22	-5.1
2,324,132	-		OH686_11280	0.22	+0.2
2,324,132	-		OH686_11280	0.22	-0.5
2,324,132	-		OH686_11280	0.22	+1.5
2,324,132	-		OH686_11280	0.22	-0.5
2,324,132	-		OH686_11280	0.22	+0.2
2,324,145	+		OH686_11280	0.23	+0.2
2,324,145	+		OH686_11280	0.23	-1.2
2,324,146	-		OH686_11280	0.23	-0.6
2,324,146	-		OH686_11280	0.23	+0.2
2,324,146	-		OH686_11280	0.23	-0.9
2,324,146	-		OH686_11280	0.23	+0.2
2,324,489	+		OH686_11280	0.51	+0.2
2,324,489	+		OH686_11280	0.51	-0.8
2,324,490	-		OH686_11280	0.51	-0.4
2,324,490	-		OH686_11280	0.51	-0.1
2,324,490	-		OH686_11280	0.51	+0.2
2,324,550	+		OH686_11280	0.56	+0.2
2,324,773	-		OH686_11280	0.74	-0.1