Strain Fitness in Pseudomonas sp. S08-1 around OH686_10980

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
2,262,247	+		OH686_10970	0.82	-1.5
2,262,247	+		OH686_10970	0.82	+0.8
2,262,248	-		OH686_10970	0.82	-0.0
2,262,280	+		OH686_10970	0.85	-0.5
2,262,280	+		OH686_10970	0.85	+0.4
2,262,280	+		OH686_10970	0.85	+0.6
2,262,280	+		OH686_10970	0.85	-0.1
2,262,281	-		OH686_10970	0.85	-0.1
2,262,281	-		OH686_10970	0.85	+1.4
2,262,281	-		OH686_10970	0.85	+0.6
2,262,281	-		OH686_10970	0.85	-1.0
2,262,281	-		OH686_10970	0.85	-0.8
2,262,333	+				+0.4
2,262,333	+				-0.1
2,262,425	+				-1.4
2,262,428	+				-0.5
2,262,428	+				-0.4
2,262,428	+				-0.1
2,262,428	+				-0.6
2,262,428	+				-0.9
2,262,429	-				+0.6
2,262,429	-				-0.1
2,262,429	-				-0.3
2,262,429	-				-1.3
2,262,429	-				+1.8
2,262,462	+				+0.0
2,262,462	+				-1.2
2,262,462	+				+0.7
2,262,462	+				-0.6
2,262,462	+				+1.0
2,262,462	+				-0.5
2,262,463	-				-0.7
2,262,463	-				+0.5
2,262,463	-				-0.7
2,262,463	-				-0.1
2,262,463	-				+1.0
2,262,463	-				-0.1
2,262,463	-				+0.0
2,262,463	-				+0.8
2,262,463	-				+0.4
2,262,492	+				+0.4
2,262,494	+				+0.0
2,262,494	+				-0.8
2,262,494	+				+0.9
2,262,494	+				-0.5
2,262,494	+				-0.5
2,262,495	-				+1.2
2,262,505	+				-0.3
2,262,505	+				+1.8
2,262,506	-				-0.7
2,262,527	+				-0.1
2,262,527	+				+0.4
2,262,528	-				-1.3
2,262,528	-				-0.3
2,262,548	+				-0.3
2,262,549	-				-0.8
2,262,678	+		OH686_10975	0.25	+0.0
2,262,678	+		OH686_10975	0.25	-0.3
2,262,679	-		OH686_10975	0.25	-0.9
2,262,679	-		OH686_10975	0.25	-1.3
2,262,679	-		OH686_10975	0.25	-0.7
2,262,679	-		OH686_10975	0.25	+0.1
2,262,953	+		OH686_10975	0.64	-0.2
2,262,953	+		OH686_10975	0.64	+0.2
2,262,953	+		OH686_10975	0.64	+0.9
2,263,179	+				+0.2
2,263,180	-				+0.8
2,263,180	-				+0.6
2,263,195	+				-1.3
2,263,196	-				-0.4
2,263,196	-				+1.5
2,263,196	-				+1.0
2,263,196	-				+0.2
2,263,196	-				+0.4
2,263,196	-				+0.8
2,263,196	-				-0.7
2,263,197	+				-0.2
2,263,197	+				-0.1
2,263,197	+				+0.5
2,263,197	+				-0.1
2,263,198	-				+1.0
2,263,198	-				+1.6
2,263,198	-				+0.8
2,263,210	+				-0.4
2,263,210	+				-1.1
2,263,210	+				-0.0
2,263,210	+				-0.4
2,263,210	+				-0.0
2,263,210	+				-0.4
2,263,210	+				-1.4
2,263,210	+				+1.8
2,263,210	+				-1.0
2,263,210	+				-0.3
2,263,210	+				+0.2
2,263,210	+				-0.8
2,263,210	+				+0.8
2,263,210	+				+0.2
2,263,210	+				+0.4
2,263,210	+				+0.3
2,263,210	+				+0.4
2,263,210	+				-0.5
2,263,210	+				-0.9
2,263,210	+				-1.3
2,263,210	+				+0.0
2,263,210	+				+1.1
2,263,210	+				-0.3
2,263,210	-				-3.0
2,263,211	-				-2.7
2,263,211	-				+0.3
2,263,211	-				-2.7
2,263,211	-				-1.3
2,263,211	-				-0.1
2,263,211	-				-1.6
2,263,211	-				-1.3
2,263,211	-				+1.0
2,263,211	-				+0.6
2,263,211	-				-1.0
2,263,211	-				-1.7
2,263,211	-				-2.6
2,263,228	-				-0.1
2,263,358	-		OH686_10980	0.18	-1.3
2,263,609	+		OH686_10980	0.48	-1.3
2,263,609	+		OH686_10980	0.48	-0.5
2,263,609	+		OH686_10980	0.48	-0.4
2,263,610	-		OH686_10980	0.48	-0.4
2,263,610	-		OH686_10980	0.48	-0.5
2,263,610	-		OH686_10980	0.48	-1.5
2,263,610	-		OH686_10980	0.48	-0.4
2,263,744	+		OH686_10980	0.65	-1.4
2,263,744	+		OH686_10980	0.65	-0.4
2,263,744	+		OH686_10980	0.65	-1.0
2,263,745	-		OH686_10980	0.65	-0.4
2,263,745	-		OH686_10980	0.65	-2.3
2,264,029	+				+0.3
2,264,030	-				+0.7
2,264,040	+				+1.6
2,264,040	+				+1.1
2,264,040	+				+0.1
2,264,040	+				-0.5
2,264,040	+				-0.5
2,264,041	-				-2.1
2,264,041	-				-0.6
2,264,041	-				+0.9
2,264,041	-				+0.2
2,264,041	-				-0.0
2,264,068	+				-0.5
2,264,068	+				-0.7
2,264,068	+				+0.7
2,264,068	+				-1.1
2,264,068	+				-0.3
2,264,068	+				-1.0
2,264,068	+				-0.2
2,264,068	+				-1.6
2,264,068	+				+0.5
2,264,068	+				-0.1
2,264,068	+				+0.4
2,264,068	+				-0.8
2,264,068	+				+0.8
2,264,068	+				-0.8
2,264,068	+				+0.1
2,264,068	+				-0.1
2,264,068	+				-0.2
2,264,068	+				-0.6
2,264,068	+				-0.8
2,264,068	+				-0.2
2,264,068	+				+0.3
2,264,068	+				-0.3
2,264,068	+				-0.2
2,264,068	+				+0.2
2,264,068	+				+0.2
2,264,068	+				-0.5
2,264,068	+				-0.5
2,264,069	-				+0.0
2,264,069	-				+0.2
2,264,069	-				-1.1
2,264,069	-				+0.1
2,264,069	-				-0.3
2,264,069	-				+0.5
2,264,069	-				+0.0
2,264,069	-				-0.1
2,264,069	-				-0.1
2,264,069	-				-0.4
2,264,069	-				+1.2
2,264,069	-				+0.7
2,264,069	-				-0.8
2,264,069	-				-0.8
2,264,069	-				+0.9
2,264,069	-				+0.9
2,264,069	-				-1.0
2,264,069	-				+0.3
2,264,069	-				+0.3
2,264,069	-				+1.7
2,264,069	-				+0.9
2,264,071	-				-0.9
2,264,071	-				-1.1
2,264,095	+				+0.0
2,264,095	+				-0.9
2,264,095	+				-1.5
2,264,096	-				-0.4
2,264,096	-				-0.1
2,264,149	+		OH686_10985	0.18	+0.9
2,264,149	+		OH686_10985	0.18	+0.4
2,264,149	+		OH686_10985	0.18	-0.6
2,264,149	+		OH686_10985	0.18	+0.7
2,264,149	+		OH686_10985	0.18	+1.4
2,264,149	+		OH686_10985	0.18	-1.9
2,264,149	+		OH686_10985	0.18	+0.2
2,264,149	+		OH686_10985	0.18	-0.3
2,264,149	+		OH686_10985	0.18	+1.2
2,264,149	+		OH686_10985	0.18	-1.0
2,264,150	-		OH686_10985	0.18	+0.3
2,264,150	-		OH686_10985	0.18	-0.6
2,264,150	-		OH686_10985	0.18	-1.4
2,264,150	-		OH686_10985	0.18	-0.2
2,264,150	-		OH686_10985	0.18	-0.1
2,264,150	-		OH686_10985	0.18	-0.1
2,264,308	+		OH686_10985	0.45	+1.6
2,264,308	+		OH686_10985	0.45	+1.1
2,264,309	-		OH686_10985	0.45	+0.4
2,264,437	+		OH686_10985	0.67	-3.3
2,264,437	+		OH686_10985	0.67	-0.9
2,264,437	+		OH686_10985	0.67	+0.6
2,264,438	-		OH686_10985	0.67	-0.8
2,264,438	-		OH686_10985	0.67	+0.3
2,264,438	-		OH686_10985	0.67	-0.4
2,264,438	-		OH686_10985	0.67	+0.9
2,264,438	-		OH686_10985	0.67	+1.2
2,264,438	-		OH686_10985	0.67	+0.8
2,264,527	-		OH686_10985	0.82	+1.0
2,264,871	+		OH686_10990	0.79	-0.1
2,264,871	+		OH686_10990	0.79	+0.4
2,264,871	+		OH686_10990	0.79	-0.7
2,264,871	+		OH686_10990	0.79	+0.5
2,264,871	+		OH686_10990	0.79	-0.8
2,264,871	+		OH686_10990	0.79	-0.2
2,264,871	+		OH686_10990	0.79	-2.0
2,264,871	+		OH686_10990	0.79	-0.7
2,264,872	-		OH686_10990	0.79	+0.2
2,264,872	-		OH686_10990	0.79	+0.1
2,264,872	-		OH686_10990	0.79	-0.3
2,264,872	-		OH686_10990	0.79	-1.0
2,264,878	-		OH686_10990	0.81	-0.7
2,264,991	+				-0.1