Strain Fitness in Pseudomonas sp. S08-1 around OH686_10905

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
2,249,111	-				-0.8
2,249,111	-				+0.8
2,249,111	-				+0.3
2,249,111	-				+1.0
2,249,151	+				+0.0
2,249,151	+				+1.2
2,249,151	+				+1.0
2,249,151	+				-1.0
2,249,151	+				-0.1
2,249,151	+				+0.0
2,249,151	+				-0.6
2,249,151	+				+0.5
2,249,152	-				+0.5
2,249,152	-				+0.4
2,249,152	-				+0.7
2,249,152	-				-0.6
2,249,152	-				+0.7
2,249,152	-				+0.2
2,249,163	+				-0.1
2,249,163	+				-0.9
2,249,163	+				+0.0
2,249,163	+				+0.7
2,249,164	-				+0.8
2,249,228	+				+0.7
2,249,228	+				+0.6
2,249,228	+				+1.1
2,249,228	+				+1.0
2,249,228	+				+0.4
2,249,228	+				-0.6
2,249,229	-				+0.6
2,249,229	-				+1.3
2,249,229	-				-0.2
2,249,229	-				+0.8
2,249,229	-				+0.6
2,249,229	-				-0.5
2,249,229	-				+0.4
2,249,229	-				+0.4
2,249,229	-				+0.4
2,249,229	-				+1.2
2,249,255	-				+0.1
2,249,255	-				+0.3
2,249,255	-				+0.2
2,249,300	+				+0.3
2,249,300	+				+2.0
2,249,300	+				+0.1
2,249,300	+				-0.8
2,249,301	-				+0.3
2,249,301	-				-0.3
2,249,301	-				-0.1
2,249,342	+				+0.6
2,249,342	+				-0.4
2,249,342	+				+0.1
2,249,342	+				+1.0
2,249,343	-				-1.2
2,249,343	-				+0.1
2,249,343	-				+0.4
2,249,343	-				+0.9
2,249,343	-				+0.6
2,249,343	-				+0.2
2,249,343	-				-1.3
2,249,385	+				-1.5
2,249,387	+				-0.6
2,249,387	+				+0.6
2,249,388	-				+1.0
2,249,400	-				-0.0
2,249,400	-				-0.8
2,249,524	+		OH686_10900	0.26	-0.3
2,249,546	-		OH686_10900	0.30	+0.2
2,249,588	-		OH686_10900	0.38	+0.9
2,249,784	+		OH686_10900	0.74	+0.4
2,249,784	+		OH686_10900	0.74	+0.2
2,249,784	+		OH686_10900	0.74	+0.0
2,249,825	+		OH686_10900	0.82	+0.1
2,249,825	+		OH686_10900	0.82	-0.4
2,249,943	+				+0.1
2,249,943	+				+1.6
2,249,943	+				+1.0
2,249,943	+				+1.2
2,249,943	+				-0.2
2,249,943	+				+0.6
2,249,943	+				-0.4
2,249,943	+				+0.4
2,249,943	+				+1.2
2,249,943	+				+0.3
2,249,943	+				+1.5
2,249,943	+				-0.2
2,249,943	+				+0.4
2,249,944	-				-0.4
2,249,944	-				-0.2
2,249,944	-				+0.2
2,249,944	-				+0.4
2,249,944	-				+0.2
2,249,944	-				+0.1
2,249,944	-				+0.1
2,249,944	-				-1.0
2,249,944	-				+0.3
2,250,032	+		OH686_10905	0.17	-2.6
2,250,032	+		OH686_10905	0.17	-0.7
2,250,033	-		OH686_10905	0.18	+0.2
2,250,033	-		OH686_10905	0.18	-0.8
2,250,033	-		OH686_10905	0.18	-0.4
2,250,033	-		OH686_10905	0.18	-0.3
2,250,250	+		OH686_10905	0.77	-0.4
2,250,250	+		OH686_10905	0.77	+0.4
2,250,250	+		OH686_10905	0.77	-0.5
2,250,251	-		OH686_10905	0.77	-0.1
2,250,290	+		OH686_10905	0.88	+1.9
2,250,290	+		OH686_10905	0.88	-1.3
2,250,290	+		OH686_10905	0.88	-1.6
2,250,290	+		OH686_10905	0.88	+0.0
2,250,290	+		OH686_10905	0.88	+0.2
2,250,290	+		OH686_10905	0.88	-0.5
2,250,290	+		OH686_10905	0.88	-0.5
2,250,290	+		OH686_10905	0.88	+1.4
2,250,290	+		OH686_10905	0.88	+0.9
2,250,290	+		OH686_10905	0.88	+1.2
2,250,291	-		OH686_10905	0.88	-1.5
2,250,291	-		OH686_10905	0.88	-0.1
2,250,291	-		OH686_10905	0.88	-0.1
2,250,291	-		OH686_10905	0.88	+0.8
2,250,291	-		OH686_10905	0.88	+0.2
2,250,291	-		OH686_10905	0.88	+0.5
2,250,291	-		OH686_10905	0.88	-0.6
2,250,324	+				+0.4
2,250,324	+				-1.1
2,250,325	-				-0.1
2,250,325	-				-0.8
2,250,352	+				+1.6
2,250,352	+				-1.3
2,250,353	-				+0.2
2,250,353	-				-0.5
2,250,353	-				+0.7
2,250,377	+				-0.8
2,250,378	-				-0.2
2,250,378	-				-0.7
2,250,378	-				-0.6
2,250,378	-				-0.3
2,250,378	-				-0.8
2,250,467	+		OH686_10910	0.22	+0.2
2,250,587	+		OH686_10910	0.51	+0.2
2,250,624	+		OH686_10910	0.60	+1.1
2,250,624	+		OH686_10910	0.60	-1.5
2,250,624	+		OH686_10910	0.60	+0.1
2,250,624	+		OH686_10910	0.60	-1.0
2,250,625	-		OH686_10910	0.60	-1.4
2,250,625	-		OH686_10910	0.60	+1.6
2,250,625	-		OH686_10910	0.60	+1.0
2,250,625	-		OH686_10910	0.60	+1.6
2,250,625	-		OH686_10910	0.60	-0.8
2,250,639	+		OH686_10910	0.64	+0.1
2,250,795	+				+0.2
2,250,796	-				-0.6
2,250,822	+				-0.6
2,250,822	+				+0.6
2,250,822	+				-1.0
2,250,822	+				+0.7
2,250,823	-				+0.6
2,250,823	-				+0.6
2,250,823	-				+0.5
2,250,823	-				+2.2
2,250,826	+				-0.3
2,250,826	+				-0.4
2,250,826	+				+0.8
2,250,826	+				+0.3
2,250,826	+				+0.6
2,250,826	+				+0.9
2,250,826	+				+0.1
2,250,826	+				+0.3
2,250,826	+				+0.8
2,250,826	+				-0.4
2,250,827	-				+0.4
2,250,827	-				+0.5
2,250,827	-				-1.0
2,250,827	-				-0.2
2,250,827	-				-0.2
2,250,827	-				+0.0
2,250,827	-				+0.5
2,250,827	-				+0.2
2,250,827	-				+0.7
2,250,827	-				+0.2
2,250,827	-				+0.2
2,250,827	-				-1.0
2,250,827	-				-0.1
2,250,827	-				-0.4
2,250,827	-				-1.1
2,250,827	-				+0.4
2,250,829	-				+0.3
2,250,829	-				+0.7
2,250,829	-				+0.4
2,250,829	-				+1.6
2,250,829	-				+0.3
2,250,829	-				-1.3
2,250,853	-				+0.3
2,250,853	-				-0.1
2,250,891	-				+0.5
2,250,891	-				-0.4
2,250,891	-				+0.2
2,250,913	+				-0.2
2,250,913	+				-0.6
2,250,913	+				-0.4
2,250,913	+				+0.1
2,250,913	+				-1.3
2,250,914	-				-0.1
2,250,914	-				-1.3
2,250,916	-				-0.3
2,250,916	-				-0.0
2,250,926	+				+0.2
2,250,927	-				-0.4
2,251,069	+				+1.5
2,251,069	+				-1.5
2,251,070	-				-0.8
2,251,070	-				-0.3
2,251,070	-				-0.1
2,251,121	+		OH686_10915	0.12	+0.4
2,251,121	+		OH686_10915	0.12	+0.8
2,251,121	+		OH686_10915	0.12	-0.5
2,251,121	+		OH686_10915	0.12	+0.8
2,251,121	+		OH686_10915	0.12	-1.0
2,251,121	+		OH686_10915	0.12	+0.8
2,251,121	+		OH686_10915	0.12	-0.8
2,251,121	+		OH686_10915	0.12	-1.1
2,251,121	+		OH686_10915	0.12	+1.4
2,251,121	+		OH686_10915	0.12	+1.2
2,251,121	+		OH686_10915	0.12	+0.8
2,251,121	+		OH686_10915	0.12	-0.5
2,251,121	+		OH686_10915	0.12	-1.2
2,251,121	+		OH686_10915	0.12	+0.2
2,251,121	+		OH686_10915	0.12	-0.1
2,251,121	+		OH686_10915	0.12	-1.6
2,251,122	-		OH686_10915	0.12	+0.2
2,251,122	-		OH686_10915	0.12	-0.6
2,251,122	-		OH686_10915	0.12	-0.7
2,251,122	-		OH686_10915	0.12	+0.8
2,251,122	-		OH686_10915	0.12	-0.1
2,251,122	-		OH686_10915	0.12	-0.9
2,251,122	-		OH686_10915	0.12	-2.0
2,251,122	-		OH686_10915	0.12	+0.2
2,251,122	-		OH686_10915	0.12	-0.4
2,251,122	-		OH686_10915	0.12	+0.5
2,251,122	-		OH686_10915	0.12	-0.9
2,251,122	-		OH686_10915	0.12	+0.0
2,251,122	-		OH686_10915	0.12	-0.2
2,251,122	-		OH686_10915	0.12	+1.2
2,251,122	-		OH686_10915	0.12	+0.4
2,251,122	-		OH686_10915	0.12	+0.6
2,251,123	+		OH686_10915	0.12	-0.4
2,251,124	-		OH686_10915	0.12	-0.4
2,251,124	-		OH686_10915	0.12	-1.0
2,251,124	-		OH686_10915	0.12	+0.2
2,251,142	+		OH686_10915	0.14	+1.0
2,251,142	+		OH686_10915	0.14	-1.5
2,251,143	-		OH686_10915	0.14	+0.0
2,251,143	-		OH686_10915	0.14	-0.6
2,251,301	+		OH686_10915	0.30	-1.6
2,251,310	+		OH686_10915	0.31	+0.2
2,251,310	+		OH686_10915	0.31	+1.0
2,251,310	+		OH686_10915	0.31	+1.2
2,251,310	+		OH686_10915	0.31	+1.6
2,251,310	+		OH686_10915	0.31	-0.9
2,251,310	+		OH686_10915	0.31	-2.2
2,251,310	+		OH686_10915	0.31	-0.1
2,251,310	+		OH686_10915	0.31	+0.6
2,251,310	+		OH686_10915	0.31	+0.2
2,251,310	+		OH686_10915	0.31	+1.0
2,251,311	-		OH686_10915	0.31	+2.1
2,251,311	-		OH686_10915	0.31	+0.2
2,251,311	-		OH686_10915	0.31	+0.1
2,251,311	-		OH686_10915	0.31	-0.8
2,251,311	-		OH686_10915	0.31	-0.9
2,251,314	+		OH686_10915	0.32	-1.7
2,251,314	+		OH686_10915	0.32	-0.4
2,251,314	+		OH686_10915	0.32	-0.4
2,251,314	+		OH686_10915	0.32	+0.0
2,251,314	+		OH686_10915	0.32	+0.2
2,251,315	-		OH686_10915	0.32	+1.7
2,251,315	-		OH686_10915	0.32	-0.8