Strain Fitness in Pseudomonas sp. S08-1 around OH686_10025

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
2,057,046	-				-0.6
2,057,081	+				-2.5
2,057,081	+				-2.6
2,057,081	+				-1.8
2,057,081	+				-3.2
2,057,081	+				-1.5
2,057,081	+				-0.7
2,057,081	+				-0.1
2,057,082	-				+0.4
2,057,082	-				+1.0
2,057,082	-				-0.4
2,057,082	-				-0.3
2,057,095	+				-0.0
2,057,095	+				+1.4
2,057,096	-				-1.8
2,057,096	-				-0.1
2,057,096	-				-0.2
2,057,096	-				-1.4
2,057,096	-				+2.5
2,057,280	+		OH686_10020	0.34	-1.7
2,057,280	+		OH686_10020	0.34	-1.0
2,057,330	+		OH686_10020	0.43	-1.9
2,057,330	+		OH686_10020	0.43	-0.9
2,057,330	+		OH686_10020	0.43	-1.6
2,057,330	+		OH686_10020	0.43	-2.3
2,057,330	+		OH686_10020	0.43	-1.3
2,057,331	-		OH686_10020	0.43	-2.9
2,057,331	-		OH686_10020	0.43	-2.4
2,057,332	+		OH686_10020	0.44	-0.9
2,057,332	+		OH686_10020	0.44	-0.4
2,057,332	+		OH686_10020	0.44	-2.2
2,057,332	+		OH686_10020	0.44	-1.0
2,057,332	+		OH686_10020	0.44	-2.0
2,057,332	+		OH686_10020	0.44	-2.8
2,057,332	+		OH686_10020	0.44	-1.1
2,057,332	+		OH686_10020	0.44	-2.4
2,057,332	+		OH686_10020	0.44	-1.9
2,057,332	+		OH686_10020	0.44	-1.3
2,057,333	-		OH686_10020	0.44	+0.6
2,057,333	-		OH686_10020	0.44	-2.2
2,057,333	-		OH686_10020	0.44	-0.1
2,057,333	-		OH686_10020	0.44	-2.3
2,057,333	-		OH686_10020	0.44	-0.1
2,057,333	-		OH686_10020	0.44	-2.4
2,057,333	-		OH686_10020	0.44	-1.1
2,057,508	+		OH686_10020	0.78	-1.8
2,057,587	-				-1.8
2,057,587	-				-0.6
2,057,614	+				-1.0
2,057,614	+				-1.7
2,057,615	-				-2.5
2,057,615	-				-0.0
2,057,628	+				-2.2
2,057,629	-				-0.0
2,057,633	-				-0.3
2,057,636	+				-0.3
2,057,636	+				-0.4
2,057,637	-				+1.2
2,057,637	-				+0.3
2,057,637	-				+0.9
2,057,654	-				+0.6
2,057,672	-				-0.5
2,057,795	+				-2.0
2,057,795	+				-0.4
2,057,795	+				-0.4
2,057,796	-				-0.4
2,057,892	+		OH686_10025	0.12	-0.4
2,057,909	-		OH686_10025	0.13	+1.3
2,057,929	+		OH686_10025	0.14	-0.2
2,058,077	-		OH686_10025	0.21	+0.8
2,058,131	+		OH686_10025	0.24	-0.4
2,058,176	+		OH686_10025	0.26	-1.5
2,058,177	-		OH686_10025	0.26	+0.2
2,058,259	+		OH686_10025	0.30	-2.3
2,058,326	-		OH686_10025	0.33	-0.5
2,058,330	+		OH686_10025	0.33	-1.2
2,058,330	+		OH686_10025	0.33	-2.2
2,058,330	+		OH686_10025	0.33	-1.1
2,058,334	+		OH686_10025	0.33	-3.1
2,058,334	+		OH686_10025	0.33	-1.5
2,058,335	-		OH686_10025	0.33	+0.2
2,058,343	+		OH686_10025	0.34	-1.5
2,058,344	-		OH686_10025	0.34	+0.8
2,058,385	+		OH686_10025	0.36	-1.2
2,058,385	+		OH686_10025	0.36	-1.8
2,058,385	+		OH686_10025	0.36	-1.8
2,058,386	-		OH686_10025	0.36	+0.3
2,058,416	+		OH686_10025	0.37	-2.7
2,058,416	+		OH686_10025	0.37	-1.7
2,058,417	-		OH686_10025	0.37	-0.1
2,058,451	+		OH686_10025	0.39	-3.6
2,058,514	+		OH686_10025	0.42	-1.0
2,058,515	-		OH686_10025	0.42	-0.1
2,058,515	-		OH686_10025	0.42	-0.3
2,058,526	+		OH686_10025	0.42	-1.3
2,058,574	+		OH686_10025	0.45	+0.0
2,058,594	-		OH686_10025	0.45	+0.4
2,058,594	-		OH686_10025	0.45	-0.5
2,058,602	+		OH686_10025	0.46	-0.2
2,058,603	-		OH686_10025	0.46	+0.3
2,058,603	-		OH686_10025	0.46	-0.1
2,058,621	+		OH686_10025	0.47	-2.3
2,058,621	+		OH686_10025	0.47	-1.0
2,058,665	+		OH686_10025	0.49	-1.0
2,058,739	+		OH686_10025	0.52	-1.5
2,058,773	-		OH686_10025	0.54	-0.0
2,058,773	-		OH686_10025	0.54	-0.6
2,058,773	-		OH686_10025	0.54	-1.3
2,059,008	-		OH686_10025	0.65	-0.4
2,059,008	-		OH686_10025	0.65	-0.4
2,059,035	+		OH686_10025	0.66	-1.0
2,059,134	-		OH686_10025	0.71	-0.4
2,059,207	+		OH686_10025	0.74	-1.5
2,059,207	+		OH686_10025	0.74	-0.8
2,059,249	+		OH686_10025	0.76	-2.0
2,059,315	+		OH686_10025	0.79	-1.1
2,059,315	+		OH686_10025	0.79	-0.4
2,059,324	+		OH686_10025	0.80	-3.0
2,059,324	+		OH686_10025	0.80	-2.2
2,059,325	-		OH686_10025	0.80	-0.0
2,059,325	-		OH686_10025	0.80	+0.2
2,059,354	+		OH686_10025	0.81	-1.1
2,059,420	+		OH686_10025	0.84	-1.8
2,059,447	+		OH686_10025	0.86	-1.5
2,059,462	+		OH686_10025	0.86	-1.4
2,059,462	+		OH686_10025	0.86	-1.4
2,059,463	-		OH686_10025	0.86	+0.6
2,059,463	-		OH686_10025	0.86	+0.1
2,059,463	-		OH686_10025	0.86	-1.5
2,059,463	-		OH686_10025	0.86	+1.7
2,059,492	+		OH686_10025	0.88	-1.7
2,059,537	+		OH686_10025	0.90	-2.0
2,059,537	+		OH686_10025	0.90	-2.7
2,059,538	-		OH686_10025	0.90	+0.1
2,059,588	+				-1.7
2,059,588	+				-1.7
2,059,589	-				-0.5
2,059,589	-				-0.1
2,059,589	-				+0.3
2,059,589	-				-0.5
2,059,589	-				-0.1
2,059,589	-				-2.1
2,059,609	+				-2.0
2,059,609	+				-1.2
2,059,609	+				-0.6
2,059,609	+				-2.0
2,059,609	+				-1.1
2,059,609	+				-1.6
2,059,610	-				+0.2
2,059,610	-				-0.3
2,059,610	-				-1.1
2,059,610	-				-0.2
2,059,610	-				-1.1
2,059,677	-				+0.1
2,059,677	-				-0.1
2,059,677	-				-0.1
2,059,748	-				-0.1
2,059,755	-				+0.1
2,059,780	-				+0.1
2,059,827	+		OH686_10030	0.16	-1.0
2,059,828	-		OH686_10030	0.16	-0.5
2,059,830	+		OH686_10030	0.18	-0.6
2,059,830	+		OH686_10030	0.18	-1.2
2,059,830	+		OH686_10030	0.18	-0.5
2,060,037	-		OH686_10035	0.36	-0.1
2,060,081	+		OH686_10035	0.45	-1.5
2,060,081	+		OH686_10035	0.45	-0.6
2,060,081	+		OH686_10035	0.45	-0.8
2,060,082	-		OH686_10035	0.45	+0.6
2,060,124	-		OH686_10035	0.55	-0.3
2,060,168	+		OH686_10035	0.64	-1.0
2,060,168	+		OH686_10035	0.64	-0.7
2,060,168	+		OH686_10035	0.64	-1.4
2,060,168	+		OH686_10035	0.64	-1.6
2,060,169	-		OH686_10035	0.64	+0.2
2,060,179	+		OH686_10035	0.66	-1.6
2,060,179	+		OH686_10035	0.66	-1.3
2,060,179	+		OH686_10035	0.66	-1.0
2,060,179	+		OH686_10035	0.66	-1.3
2,060,229	+		OH686_10035	0.77	-1.0
2,060,229	+		OH686_10035	0.77	-0.5
2,060,229	+		OH686_10035	0.77	-1.6
2,060,230	-		OH686_10035	0.77	+0.2
2,060,241	-		OH686_10035	0.80	+0.2
2,060,274	+		OH686_10035	0.87	-0.3
2,060,328	-				+0.1
2,060,356	-				+0.3
2,060,356	-				-1.1
2,060,359	+				-0.9
2,060,362	-				+0.1
2,060,465	-		OH686_10040	0.21	-0.2
2,060,515	+		OH686_10040	0.29	-0.9
2,060,522	+		OH686_10040	0.30	-0.8
2,060,609	-		OH686_10040	0.44	-1.6
2,060,706	+		OH686_10040	0.60	-2.4
2,060,707	-		OH686_10040	0.60	+0.2