Strain Fitness in Pseudomonas sp. S08-1 around OH686_10000

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
2,047,280	+				-0.3
2,047,281	-				-1.0
2,047,281	-				-0.5
2,047,281	-				-0.5
2,047,281	-				-0.8
2,047,281	-				-0.4
2,047,295	+				-0.5
2,047,461	+				-0.0
2,047,461	+				+0.2
2,047,461	+				-0.6
2,047,462	-				+1.1
2,047,462	-				-0.0
2,047,462	-				+0.7
2,047,462	-				+0.2
2,047,462	-				+0.6
2,047,462	-				+0.2
2,047,488	+				+0.5
2,047,488	+				-0.4
2,047,488	+				-1.8
2,047,488	+				-0.6
2,047,488	+				-0.1
2,047,488	+				+0.2
2,047,488	+				+0.4
2,047,488	+				-0.7
2,047,488	+				-0.6
2,047,488	+				-0.5
2,047,488	+				-0.7
2,047,488	+				-0.6
2,047,488	+				+0.1
2,047,488	+				-1.3
2,047,489	-				-0.0
2,047,489	-				-1.2
2,047,489	-				+0.1
2,047,489	-				-0.9
2,047,489	-				-0.7
2,047,489	-				+0.1
2,047,489	-				-0.5
2,047,489	-				-0.3
2,047,489	-				-1.0
2,047,489	-				-0.5
2,047,489	-				+0.0
2,047,489	-				+1.9
2,047,489	-				-0.2
2,047,489	-				-0.3
2,047,489	-				-0.9
2,047,520	+		OH686_09995	0.10	+0.3
2,047,520	+		OH686_09995	0.10	-0.8
2,047,555	+		OH686_09995	0.18	-0.6
2,047,555	+		OH686_09995	0.18	-0.8
2,047,555	+		OH686_09995	0.18	-0.1
2,047,556	-		OH686_09995	0.18	+0.8
2,047,556	-		OH686_09995	0.18	+1.9
2,047,556	-		OH686_09995	0.18	-0.4
2,047,556	-		OH686_09995	0.18	-0.1
2,047,633	-		OH686_09995	0.36	-1.5
2,047,633	-		OH686_09995	0.36	-1.5
2,047,650	+		OH686_09995	0.40	-0.8
2,047,650	+		OH686_09995	0.40	-0.4
2,047,651	-		OH686_09995	0.40	+0.1
2,047,651	-		OH686_09995	0.40	-0.3
2,047,659	+		OH686_09995	0.42	+0.4
2,047,660	-		OH686_09995	0.42	-0.3
2,047,660	-		OH686_09995	0.42	-0.8
2,047,994	+				+0.2
2,047,995	-				+1.4
2,048,065	+				-0.4
2,048,065	+				-0.6
2,048,065	+				+0.1
2,048,065	+				+0.1
2,048,065	+				-1.3
2,048,065	+				+1.2
2,048,066	-				+0.8
2,048,066	-				+0.3
2,048,066	-				-2.0
2,048,066	-				+0.6
2,048,107	-				-0.6
2,048,602	+		OH686_10000	0.32	-2.1
2,048,821	+		OH686_10000	0.48	-0.8
2,048,821	+		OH686_10000	0.48	-1.6
2,048,821	+		OH686_10000	0.48	-3.0
2,048,821	+		OH686_10000	0.48	-2.2
2,048,821	+		OH686_10000	0.48	-2.2
2,048,821	+		OH686_10000	0.48	-3.9
2,048,821	+		OH686_10000	0.48	-0.3
2,048,821	+		OH686_10000	0.48	-2.4
2,048,821	+		OH686_10000	0.48	+0.2
2,048,821	+		OH686_10000	0.48	+0.2
2,048,821	+		OH686_10000	0.48	-2.6
2,048,821	+		OH686_10000	0.48	-1.9
2,048,821	+		OH686_10000	0.48	+0.0
2,048,821	+		OH686_10000	0.48	-2.2
2,048,821	+		OH686_10000	0.48	-1.9
2,048,821	+		OH686_10000	0.48	-2.5
2,048,821	+		OH686_10000	0.48	-2.4
2,048,821	+		OH686_10000	0.48	+1.0
2,048,821	+		OH686_10000	0.48	-2.3
2,048,822	-		OH686_10000	0.48	-1.6
2,048,822	-		OH686_10000	0.48	-1.0
2,048,822	-		OH686_10000	0.48	-1.7
2,048,822	-		OH686_10000	0.48	-2.0
2,048,822	-		OH686_10000	0.48	-4.6
2,048,822	-		OH686_10000	0.48	-1.1
2,048,822	-		OH686_10000	0.48	-3.0
2,048,822	-		OH686_10000	0.48	-1.4
2,048,822	-		OH686_10000	0.48	-0.5
2,048,822	-		OH686_10000	0.48	-1.6
2,048,822	-		OH686_10000	0.48	-2.3
2,048,822	-		OH686_10000	0.48	-1.7
2,048,822	-		OH686_10000	0.48	-1.0
2,048,822	-		OH686_10000	0.48	-1.8
2,048,822	-		OH686_10000	0.48	-2.5
2,048,827	+		OH686_10000	0.48	-1.4
2,048,827	+		OH686_10000	0.48	-2.1
2,048,827	+		OH686_10000	0.48	-5.0
2,048,827	+		OH686_10000	0.48	-2.4
2,048,827	+		OH686_10000	0.48	-2.6
2,048,827	+		OH686_10000	0.48	-2.7
2,048,827	+		OH686_10000	0.48	-0.9
2,048,828	-		OH686_10000	0.48	-2.5
2,048,828	-		OH686_10000	0.48	-2.6
2,048,828	-		OH686_10000	0.48	-2.6
2,048,828	-		OH686_10000	0.48	-2.5
2,048,828	-		OH686_10000	0.48	-2.8
2,048,828	-		OH686_10000	0.48	-2.9
2,048,828	-		OH686_10000	0.48	-3.0
2,048,828	-		OH686_10000	0.48	-0.6
2,048,857	+		OH686_10000	0.50	-1.9
2,048,857	+		OH686_10000	0.50	-2.9
2,048,857	+		OH686_10000	0.50	-3.7
2,048,857	+		OH686_10000	0.50	-1.3
2,048,857	+		OH686_10000	0.50	-1.7
2,048,858	-		OH686_10000	0.50	-1.0
2,048,858	-		OH686_10000	0.50	-0.6
2,048,858	-		OH686_10000	0.50	-1.5
2,048,858	-		OH686_10000	0.50	-1.3
2,048,858	-		OH686_10000	0.50	+0.6
2,049,060	+		OH686_10000	0.65	-2.3
2,049,060	+		OH686_10000	0.65	-0.7
2,049,060	+		OH686_10000	0.65	-3.5
2,049,060	+		OH686_10000	0.65	-3.8
2,049,061	-		OH686_10000	0.65	-3.8
2,049,061	-		OH686_10000	0.65	-2.2
2,049,061	-		OH686_10000	0.65	-4.5
2,049,061	-		OH686_10000	0.65	-0.1
2,049,061	-		OH686_10000	0.65	-2.1
2,049,061	-		OH686_10000	0.65	-1.2
2,049,178	+		OH686_10000	0.73	-0.8
2,049,178	+		OH686_10000	0.73	-2.6
2,049,178	+		OH686_10000	0.73	+0.2
2,049,178	+		OH686_10000	0.73	-3.3
2,049,178	+		OH686_10000	0.73	-0.8
2,049,178	+		OH686_10000	0.73	-3.8
2,049,178	+		OH686_10000	0.73	-0.4
2,049,178	+		OH686_10000	0.73	-1.5
2,049,178	+		OH686_10000	0.73	-0.6
2,049,178	+		OH686_10000	0.73	-3.3
2,049,178	+		OH686_10000	0.73	-0.6
2,049,178	+		OH686_10000	0.73	-2.7
2,049,178	+		OH686_10000	0.73	-2.6
2,049,179	-		OH686_10000	0.73	-3.0
2,049,179	-		OH686_10000	0.73	-3.0
2,049,179	-		OH686_10000	0.73	-2.4
2,049,179	-		OH686_10000	0.73	-1.0
2,049,179	-		OH686_10000	0.73	-1.5
2,049,179	-		OH686_10000	0.73	-3.0
2,049,179	-		OH686_10000	0.73	-1.7
2,049,179	-		OH686_10000	0.73	-3.2
2,049,179	-		OH686_10000	0.73	-0.3
2,049,179	-		OH686_10000	0.73	-0.1
2,049,179	-		OH686_10000	0.73	-2.7
2,049,179	-		OH686_10000	0.73	-3.6
2,049,179	-		OH686_10000	0.73	-2.2
2,049,179	-		OH686_10000	0.73	-2.8
2,049,179	-		OH686_10000	0.73	-2.7
2,049,391	+		OH686_10000	0.88	-2.3
2,049,391	+		OH686_10000	0.88	-0.1
2,049,392	-		OH686_10000	0.88	-1.5
2,049,392	-		OH686_10000	0.88	+0.2
2,049,457	+				-1.4
2,049,457	+				-3.6
2,049,457	+				-2.8
2,049,457	+				-2.8
2,049,457	+				-3.1
2,049,457	+				-2.0
2,049,457	+				-4.8
2,049,457	+				-0.9
2,049,458	-				+0.0
2,049,458	-				+0.6
2,049,458	-				-2.7
2,049,458	-				-3.7
2,049,458	-				-1.4
2,049,458	-				-2.3
2,049,458	-				-3.5
2,049,458	-				+0.2
2,049,563	+				-0.7
2,049,594	-				+1.7
2,049,674	+				-2.7
2,049,675	-				-1.8
2,049,675	-				-3.1
2,049,675	-				-3.6
2,049,731	+				-3.1
2,049,731	+				-1.5
2,049,731	+				-1.2
2,049,732	-				-3.2
2,049,732	-				-1.6
2,049,732	-				-2.5
2,049,732	-				-2.0
2,049,732	-				-1.0
2,049,732	-				-1.7
2,049,759	+				-3.4
2,049,764	+				-3.5
2,049,764	+				-3.2
2,049,764	+				-2.9
2,049,765	-				-1.0
2,049,765	-				-1.6
2,049,854	+				-3.0
2,049,854	+				-0.8
2,049,854	+				-3.0
2,049,854	+				-1.2
2,049,854	+				-2.7
2,049,854	+				-2.6
2,049,854	+				-3.4
2,049,854	+				-3.8
2,049,854	+				-0.4
2,049,854	+				-2.8
2,049,854	+				-3.0
2,049,854	+				-4.3
2,049,855	-				-0.4
2,049,855	-				-0.9
2,049,855	-				-2.7
2,049,855	-				-3.5
2,049,855	-				-2.5
2,049,907	+				-2.9
2,049,907	+				-2.8
2,049,907	+				-2.6
2,049,907	+				-3.2
2,049,932	+				-1.5
2,049,932	+				-2.0
2,049,932	+				-1.3
2,049,932	+				-2.8
2,049,933	+				-1.1
2,049,933	-				+0.2
2,049,933	-				+0.4
2,049,933	-				-3.3
2,049,933	-				-1.7
2,049,933	-				-4.0
2,050,148	+		OH686_10005	0.13	-1.2
2,050,148	+		OH686_10005	0.13	-1.1
2,050,149	-		OH686_10005	0.13	-2.1
2,050,149	-		OH686_10005	0.13	-1.0
2,050,149	-		OH686_10005	0.13	-0.6
2,050,149	-		OH686_10005	0.13	-3.2