Strain Fitness in Pseudomonas sp. S08-1 around OH686_09710

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
1,983,094	+		OH686_09700	0.74	-0.2
1,983,094	+		OH686_09700	0.74	-0.3
1,983,094	+		OH686_09700	0.74	-0.1
1,983,094	+		OH686_09700	0.74	-0.5
1,983,094	+		OH686_09700	0.74	-0.6
1,983,095	-		OH686_09700	0.74	-0.1
1,983,095	-		OH686_09700	0.74	-1.0
1,983,095	-		OH686_09700	0.74	-0.6
1,983,095	-		OH686_09700	0.74	-2.1
1,983,095	-		OH686_09700	0.74	-0.3
1,983,097	+		OH686_09700	0.74	+0.4
1,983,097	+		OH686_09700	0.74	+0.2
1,983,097	+		OH686_09700	0.74	-0.5
1,983,097	+		OH686_09700	0.74	-0.5
1,983,097	+		OH686_09700	0.74	+0.2
1,983,097	+		OH686_09700	0.74	-1.2
1,983,097	+		OH686_09700	0.74	+0.4
1,983,097	+		OH686_09700	0.74	-0.3
1,983,098	-		OH686_09700	0.74	+0.3
1,983,098	-		OH686_09700	0.74	-1.1
1,983,098	-		OH686_09700	0.74	-1.8
1,983,098	-		OH686_09700	0.74	-1.3
1,983,210	+		OH686_09700	0.78	-0.0
1,983,210	+		OH686_09700	0.78	-0.6
1,983,210	+		OH686_09700	0.78	-1.4
1,983,210	+		OH686_09700	0.78	-1.8
1,983,210	+		OH686_09700	0.78	-0.1
1,983,210	+		OH686_09700	0.78	-0.8
1,983,210	+		OH686_09700	0.78	-0.4
1,983,210	+		OH686_09700	0.78	-0.7
1,983,211	-		OH686_09700	0.78	-1.1
1,983,211	-		OH686_09700	0.78	-1.2
1,983,211	-		OH686_09700	0.78	-0.8
1,983,211	-		OH686_09700	0.78	-0.7
1,983,211	-		OH686_09700	0.78	-1.1
1,983,211	-		OH686_09700	0.78	-0.4
1,983,211	-		OH686_09700	0.78	-1.6
1,983,443	-		OH686_09700	0.86	-0.8
1,983,443	-		OH686_09700	0.86	-0.9
1,983,856	+				-0.5
1,983,856	+				+0.2
1,983,856	+				-0.9
1,983,856	+				+0.7
1,983,857	-				+0.5
1,983,857	-				-0.4
1,983,857	-				+0.2
1,983,857	-				+0.6
1,983,887	+		OH686_09705	0.16	-0.6
1,983,888	-		OH686_09705	0.16	-0.0
1,983,888	-		OH686_09705	0.16	-0.9
1,983,925	+		OH686_09705	0.39	-0.3
1,983,926	-		OH686_09705	0.39	-0.2
1,983,926	-		OH686_09705	0.39	-1.6
1,983,931	+		OH686_09705	0.42	+0.5
1,983,931	+		OH686_09705	0.42	+1.1
1,983,980	+		OH686_09705	0.72	-1.4
1,984,180	+				-0.4
1,984,235	-				-1.1
1,984,235	-				-1.7
1,984,235	-				-0.6
1,984,305	+				-0.4
1,984,396	-		OH686_09710	0.11	-0.1
1,984,444	+		OH686_09710	0.13	-0.8
1,984,445	-		OH686_09710	0.13	+0.0
1,984,492	+		OH686_09710	0.15	-0.8
1,984,493	-		OH686_09710	0.15	+0.2
1,984,519	+		OH686_09710	0.16	-1.1
1,984,519	+		OH686_09710	0.16	-0.1
1,984,520	-		OH686_09710	0.16	-0.6
1,984,520	-		OH686_09710	0.16	-1.1
1,984,705	+		OH686_09710	0.23	-1.4
1,984,705	+		OH686_09710	0.23	-1.5
1,984,706	-		OH686_09710	0.23	+0.2
1,984,706	-		OH686_09710	0.23	+0.2
1,984,723	+		OH686_09710	0.24	-1.3
1,984,723	+		OH686_09710	0.24	-0.8
1,984,723	+		OH686_09710	0.24	+1.2
1,984,723	+		OH686_09710	0.24	+0.2
1,984,724	-		OH686_09710	0.24	+0.2
1,984,724	-		OH686_09710	0.24	-0.1
1,984,726	-		OH686_09710	0.24	-1.0
1,985,050	+		OH686_09710	0.36	-0.8
1,985,050	+		OH686_09710	0.36	-0.4
1,985,051	-		OH686_09710	0.36	-0.6
1,985,051	-		OH686_09710	0.36	-0.4
1,985,051	-		OH686_09710	0.36	-0.4
1,985,071	+		OH686_09710	0.37	-0.1
1,985,072	-		OH686_09710	0.37	-0.1
1,985,173	+		OH686_09710	0.41	+0.2
1,985,182	+		OH686_09710	0.41	-0.8
1,985,182	+		OH686_09710	0.41	-0.4
1,985,183	-		OH686_09710	0.41	+0.2
1,985,183	-		OH686_09710	0.41	+0.2
1,985,413	+		OH686_09710	0.50	-0.1
1,985,414	-		OH686_09710	0.50	+0.2
1,985,419	+		OH686_09710	0.50	+0.2
1,985,419	+		OH686_09710	0.50	+0.2
1,985,419	+		OH686_09710	0.50	+0.2
1,985,420	-		OH686_09710	0.50	-0.6
1,985,420	-		OH686_09710	0.50	+0.2
1,985,420	-		OH686_09710	0.50	-0.6
1,985,420	-		OH686_09710	0.50	-1.1
1,985,420	-		OH686_09710	0.50	+0.2
1,985,683	+		OH686_09710	0.60	+0.2
1,985,683	+		OH686_09710	0.60	-0.4
1,985,683	+		OH686_09710	0.60	+0.2
1,985,684	-		OH686_09710	0.60	-1.3
1,985,684	-		OH686_09710	0.60	-0.1
1,985,704	+		OH686_09710	0.61	-0.4
1,985,705	-		OH686_09710	0.61	-0.6
1,985,818	-		OH686_09710	0.65	-0.1
1,985,824	+		OH686_09710	0.65	-0.1
1,985,857	+		OH686_09710	0.67	-0.1
1,985,857	+		OH686_09710	0.67	+0.2
1,985,858	-		OH686_09710	0.67	-1.3
1,985,858	-		OH686_09710	0.67	-0.1
1,985,858	-		OH686_09710	0.67	-0.1
1,985,867	-		OH686_09710	0.67	+0.2
1,985,867	-		OH686_09710	0.67	-0.6
1,985,867	-		OH686_09710	0.67	-1.1
1,985,867	-		OH686_09710	0.67	+0.2
1,985,867	-		OH686_09710	0.67	+0.2
1,986,056	-		OH686_09710	0.74	+0.2
1,986,062	-		OH686_09710	0.74	-0.1
1,986,127	+		OH686_09710	0.77	+0.2
1,986,127	+		OH686_09710	0.77	+1.2
1,986,127	+		OH686_09710	0.77	+0.2
1,986,128	-		OH686_09710	0.77	-0.4
1,986,128	-		OH686_09710	0.77	-1.0
1,986,130	+		OH686_09710	0.77	+0.2
1,986,130	+		OH686_09710	0.77	-0.8
1,986,131	-		OH686_09710	0.77	+0.2
1,986,131	-		OH686_09710	0.77	-0.4
1,986,131	-		OH686_09710	0.77	-0.8
1,986,155	-		OH686_09710	0.78	+0.2
1,986,208	+		OH686_09710	0.80	-0.8
1,986,209	-		OH686_09710	0.80	-0.4
1,986,209	-		OH686_09710	0.80	-0.4
1,986,535	+				-0.1
1,986,536	-				+0.2
1,986,536	-				-0.4
1,986,536	-				+1.5
1,987,276	+		OH686_09715	0.31	-0.1
1,987,630	-		OH686_09715	0.52	+0.2