Strain Fitness in Pseudomonas sp. S08-1 around OH686_08475

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
1,725,545	+		OH686_08470	0.49	-4.0
1,725,545	+		OH686_08470	0.49	-1.8
1,725,545	+		OH686_08470	0.49	-0.4
1,725,545	+		OH686_08470	0.49	-2.7
1,725,545	+		OH686_08470	0.49	-3.3
1,725,545	+		OH686_08470	0.49	-2.0
1,725,545	+		OH686_08470	0.49	-2.9
1,725,545	+		OH686_08470	0.49	+0.3
1,725,545	+		OH686_08470	0.49	-4.3
1,725,545	+		OH686_08470	0.49	-0.6
1,725,545	+		OH686_08470	0.49	-3.4
1,725,545	+		OH686_08470	0.49	-2.2
1,725,545	+		OH686_08470	0.49	-1.5
1,725,545	+		OH686_08470	0.49	-2.4
1,725,545	+		OH686_08470	0.49	-1.6
1,725,545	+		OH686_08470	0.49	-0.7
1,725,545	+		OH686_08470	0.49	-1.6
1,725,545	+		OH686_08470	0.49	-2.4
1,725,546	-		OH686_08470	0.49	-1.4
1,725,546	-		OH686_08470	0.49	-1.1
1,725,546	-		OH686_08470	0.49	-2.1
1,725,546	-		OH686_08470	0.49	-0.3
1,725,546	-		OH686_08470	0.49	-2.0
1,725,546	-		OH686_08470	0.49	-3.1
1,725,546	-		OH686_08470	0.49	-1.5
1,725,546	-		OH686_08470	0.49	-2.1
1,725,546	-		OH686_08470	0.49	-2.9
1,725,546	-		OH686_08470	0.49	-1.7
1,725,546	-		OH686_08470	0.49	-0.1
1,725,546	-		OH686_08470	0.49	-2.7
1,725,546	-		OH686_08470	0.49	-0.9
1,725,546	-		OH686_08470	0.49	-0.1
1,725,546	-		OH686_08470	0.49	-2.1
1,725,546	-		OH686_08470	0.49	+0.0
1,725,546	-		OH686_08470	0.49	-2.3
1,725,546	-		OH686_08470	0.49	+0.2
1,725,546	-		OH686_08470	0.49	-3.1
1,725,546	-		OH686_08470	0.49	-1.3
1,725,546	-		OH686_08470	0.49	-1.4
1,725,546	-		OH686_08470	0.49	-1.8
1,725,549	+		OH686_08470	0.50	-1.8
1,725,549	+		OH686_08470	0.50	-2.7
1,725,549	+		OH686_08470	0.50	-1.4
1,725,549	+		OH686_08470	0.50	-1.4
1,725,549	+		OH686_08470	0.50	-0.2
1,725,549	+		OH686_08470	0.50	-0.1
1,725,549	+		OH686_08470	0.50	-2.5
1,725,549	+		OH686_08470	0.50	-2.7
1,725,549	+		OH686_08470	0.50	-1.9
1,725,550	-		OH686_08470	0.50	-0.3
1,725,550	-		OH686_08470	0.50	-0.7
1,725,550	-		OH686_08470	0.50	-1.7
1,725,550	-		OH686_08470	0.50	-1.6
1,725,550	-		OH686_08470	0.50	-0.5
1,725,570	+		OH686_08470	0.51	-0.4
1,725,570	+		OH686_08470	0.51	-2.4
1,725,571	-		OH686_08470	0.51	-1.9
1,725,599	+		OH686_08470	0.53	-2.4
1,725,600	-		OH686_08470	0.53	-2.4
1,725,637	-		OH686_08470	0.56	-2.7
1,725,803	+		OH686_08470	0.69	-0.6
1,725,803	+		OH686_08470	0.69	-3.1
1,725,803	+		OH686_08470	0.69	-1.0
1,725,803	+		OH686_08470	0.69	-1.5
1,725,803	+		OH686_08470	0.69	-1.1
1,725,803	+		OH686_08470	0.69	-0.6
1,725,803	+		OH686_08470	0.69	-2.1
1,725,803	+		OH686_08470	0.69	-2.1
1,725,804	-		OH686_08470	0.69	-1.3
1,725,804	-		OH686_08470	0.69	-2.8
1,725,804	-		OH686_08470	0.69	-0.4
1,725,804	-		OH686_08470	0.69	-2.3
1,725,804	-		OH686_08470	0.69	-2.1
1,725,804	-		OH686_08470	0.69	-2.2
1,725,804	-		OH686_08470	0.69	-0.6
1,725,866	+		OH686_08470	0.74	-1.0
1,725,866	+		OH686_08470	0.74	-0.8
1,725,866	+		OH686_08470	0.74	-2.4
1,725,866	+		OH686_08470	0.74	-2.5
1,725,867	-		OH686_08470	0.74	-2.4
1,725,867	-		OH686_08470	0.74	-1.4
1,725,867	-		OH686_08470	0.74	-2.3
1,725,867	-		OH686_08470	0.74	-2.7
1,725,899	+		OH686_08470	0.76	+0.2
1,725,899	+		OH686_08470	0.76	-0.1
1,725,900	-		OH686_08470	0.76	-3.9
1,726,086	+				-2.0
1,726,198	-				-0.5
1,726,210	-				-1.4
1,726,210	-				-0.1
1,726,229	+				-0.7
1,726,247	-				+2.5
1,726,247	-				+0.1
1,726,288	+				+0.6
1,726,288	+				-0.1
1,726,289	-				-1.0
1,726,300	-				-0.3
1,726,327	+				+0.2
1,726,327	+				+0.3
1,726,327	+				+0.5
1,726,327	+				-1.4
1,726,327	+				+0.0
1,726,327	+				+0.1
1,726,327	+				-0.3
1,726,327	+				-0.3
1,726,327	+				-0.4
1,726,327	+				-0.1
1,726,327	+				+0.2
1,726,327	+				+0.6
1,726,327	+				-1.3
1,726,327	+				+0.2
1,726,327	+				-0.2
1,726,327	+				-1.0
1,726,327	+				+0.4
1,726,327	+				-0.6
1,726,328	-				+0.4
1,726,328	-				+0.4
1,726,328	-				+0.5
1,726,328	-				+0.2
1,726,328	-				+0.1
1,726,328	-				-0.1
1,726,328	-				-0.5
1,726,328	-				-0.8
1,726,328	-				+0.2
1,726,328	-				+0.3
1,726,328	-				+0.1
1,726,328	-				-2.9
1,726,328	-				-0.2
1,726,328	-				+0.9
1,726,328	-				-0.1
1,726,328	-				-0.1
1,726,328	-				-1.1
1,726,331	+				-3.2
1,726,331	+				+0.0
1,726,331	+				+0.3
1,726,331	+				-1.6
1,726,332	-				-1.3
1,726,332	-				-0.4
1,726,332	-				+0.1
1,726,332	-				-1.4
1,726,332	-				-0.3
1,726,559	+		OH686_08475	0.36	-3.1
1,726,559	+		OH686_08475	0.36	-3.8
1,726,559	+		OH686_08475	0.36	-2.1
1,726,559	+		OH686_08475	0.36	-2.6
1,726,559	+		OH686_08475	0.36	-3.6
1,726,559	+		OH686_08475	0.36	+0.2
1,726,559	+		OH686_08475	0.36	-0.4
1,726,560	-		OH686_08475	0.36	-2.8
1,726,560	-		OH686_08475	0.36	-1.4
1,726,560	-		OH686_08475	0.36	-1.7
1,726,598	+		OH686_08475	0.42	-2.6
1,726,598	+		OH686_08475	0.42	-1.9
1,726,599	-		OH686_08475	0.42	-0.6
1,726,599	-		OH686_08475	0.42	+0.1
1,726,599	-		OH686_08475	0.42	-1.6
1,726,599	-		OH686_08475	0.42	-2.0
1,726,601	+		OH686_08475	0.42	-2.6
1,726,601	+		OH686_08475	0.42	-1.7
1,726,601	+		OH686_08475	0.42	+0.8
1,726,601	+		OH686_08475	0.42	-3.0
1,726,601	+		OH686_08475	0.42	-2.5
1,726,601	+		OH686_08475	0.42	-2.9
1,726,602	-		OH686_08475	0.42	-2.3
1,726,602	-		OH686_08475	0.42	-1.6
1,726,602	-		OH686_08475	0.42	-2.5
1,726,602	-		OH686_08475	0.42	-3.9
1,726,721	+		OH686_08475	0.61	-0.5
1,726,721	+		OH686_08475	0.61	-3.6
1,726,721	+		OH686_08475	0.61	-2.7
1,726,722	-		OH686_08475	0.61	-1.3
1,726,722	-		OH686_08475	0.61	-0.4
1,726,740	-		OH686_08475	0.64	-1.9
1,726,796	+		OH686_08475	0.73	-2.3
1,726,796	+		OH686_08475	0.73	+0.2
1,726,796	+		OH686_08475	0.73	-2.1
1,726,796	+		OH686_08475	0.73	-2.1
1,726,796	+		OH686_08475	0.73	-1.4
1,726,796	+		OH686_08475	0.73	-1.8
1,726,796	+		OH686_08475	0.73	-2.6
1,726,796	+		OH686_08475	0.73	-2.1
1,726,796	+		OH686_08475	0.73	-2.1
1,726,796	+		OH686_08475	0.73	-1.3
1,726,797	-		OH686_08475	0.73	-1.7
1,726,797	-		OH686_08475	0.73	-0.1
1,726,797	-		OH686_08475	0.73	-2.4
1,726,797	-		OH686_08475	0.73	-2.4
1,726,797	-		OH686_08475	0.73	-2.9
1,726,797	-		OH686_08475	0.73	-2.0
1,726,797	-		OH686_08475	0.73	-2.7
1,726,797	-		OH686_08475	0.73	-1.1
1,726,797	-		OH686_08475	0.73	-3.5
1,726,797	-		OH686_08475	0.73	-3.1
1,726,797	-		OH686_08475	0.73	-1.5
1,726,797	-		OH686_08475	0.73	-2.3
1,726,797	-		OH686_08475	0.73	-2.5
1,726,797	-		OH686_08475	0.73	-0.9
1,726,797	-		OH686_08475	0.73	-2.2
1,726,797	-		OH686_08475	0.73	-2.3
1,726,797	-		OH686_08475	0.73	-1.3
1,726,957	+				-0.9
1,726,979	+				-0.0
1,726,979	+				+0.4
1,726,979	+				-1.6
1,726,980	-				+0.0
1,726,980	-				-0.3
1,726,980	-				+0.8
1,726,980	-				+0.4
1,726,980	-				-0.5
1,726,982	+				-1.1
1,726,982	+				-0.9
1,726,982	+				+0.9
1,726,983	-				+0.5
1,726,983	-				+0.0
1,726,983	-				+0.2
1,726,983	-				+0.7