Strain Fitness in Pseudomonas sp. S08-1 around OH686_08125

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
1,653,054	+				-1.7
1,653,054	+				-0.7
1,653,054	+				-0.6
1,653,054	+				-2.0
1,653,054	+				-2.2
1,653,055	-				+1.0
1,653,055	-				-0.2
1,653,055	-				+0.8
1,653,055	-				-1.0
1,653,055	-				+0.6
1,653,055	-				+0.6
1,653,055	-				-1.1
1,653,075	+				-3.4
1,653,085	+				+0.0
1,653,085	+				-2.2
1,653,086	-				+0.2
1,653,086	-				+0.7
1,653,086	-				-0.5
1,653,094	+				-1.2
1,653,094	+				-1.1
1,653,095	-				+0.4
1,653,177	+				-0.1
1,653,178	-				-0.9
1,653,319	+		OH686_08120	0.22	+1.0
1,653,406	+		OH686_08120	0.32	-0.7
1,653,406	+		OH686_08120	0.32	-0.7
1,653,406	+		OH686_08120	0.32	-0.3
1,653,406	+		OH686_08120	0.32	-1.3
1,653,406	+		OH686_08120	0.32	-0.5
1,653,407	-		OH686_08120	0.32	-0.3
1,653,407	-		OH686_08120	0.32	+0.4
1,653,407	-		OH686_08120	0.32	-1.4
1,653,407	-		OH686_08120	0.32	-1.0
1,653,407	-		OH686_08120	0.32	-1.0
1,653,427	+		OH686_08120	0.35	+0.8
1,653,427	+		OH686_08120	0.35	+0.1
1,653,427	+		OH686_08120	0.35	-1.4
1,653,427	+		OH686_08120	0.35	+0.4
1,653,428	-		OH686_08120	0.35	-0.1
1,653,428	-		OH686_08120	0.35	-0.4
1,653,428	-		OH686_08120	0.35	+0.1
1,653,428	-		OH686_08120	0.35	-0.7
1,653,428	-		OH686_08120	0.35	-0.5
1,653,428	-		OH686_08120	0.35	-1.5
1,653,439	+		OH686_08120	0.36	-0.2
1,653,439	+		OH686_08120	0.36	-1.0
1,653,440	-		OH686_08120	0.36	+1.5
1,653,440	-		OH686_08120	0.36	+1.3
1,653,440	-		OH686_08120	0.36	+0.1
1,653,469	+		OH686_08120	0.39	-0.6
1,653,647	+		OH686_08120	0.60	-0.8
1,653,647	+		OH686_08120	0.60	-1.1
1,653,648	-		OH686_08120	0.60	+0.2
1,653,648	-		OH686_08120	0.60	-0.7
1,653,698	+		OH686_08120	0.65	-0.2
1,653,698	+		OH686_08120	0.65	-1.4
1,653,698	+		OH686_08120	0.65	-0.2
1,653,781	+		OH686_08120	0.75	+0.1
1,653,781	+		OH686_08120	0.75	-0.4
1,653,781	+		OH686_08120	0.75	-0.4
1,653,781	+		OH686_08120	0.75	-0.4
1,653,781	+		OH686_08120	0.75	+0.6
1,653,781	+		OH686_08120	0.75	-3.5
1,653,781	+		OH686_08120	0.75	-1.4
1,653,781	+		OH686_08120	0.75	+0.3
1,653,781	+		OH686_08120	0.75	-0.1
1,653,781	+		OH686_08120	0.75	-0.5
1,653,781	+		OH686_08120	0.75	-1.6
1,653,781	+		OH686_08120	0.75	-2.3
1,653,781	+		OH686_08120	0.75	-1.0
1,653,782	-		OH686_08120	0.75	-0.6
1,653,782	-		OH686_08120	0.75	-0.7
1,653,782	-		OH686_08120	0.75	+0.4
1,653,782	-		OH686_08120	0.75	+0.8
1,653,782	-		OH686_08120	0.75	-0.6
1,653,782	-		OH686_08120	0.75	+0.2
1,653,782	-		OH686_08120	0.75	-1.2
1,653,782	-		OH686_08120	0.75	-0.5
1,653,782	-		OH686_08120	0.75	-0.3
1,653,782	-		OH686_08120	0.75	+1.2
1,653,782	-		OH686_08120	0.75	-1.4
1,653,782	-		OH686_08120	0.75	-0.5
1,653,782	-		OH686_08120	0.75	+0.4
1,653,782	-		OH686_08120	0.75	-1.6
1,653,782	-		OH686_08120	0.75	-1.1
1,653,782	-		OH686_08120	0.75	+0.7
1,653,898	+		OH686_08120	0.88	-0.2
1,653,898	+		OH686_08120	0.88	+1.2
1,653,898	+		OH686_08120	0.88	+0.6
1,653,898	+		OH686_08120	0.88	+0.6
1,653,898	+		OH686_08120	0.88	-1.3
1,653,898	+		OH686_08120	0.88	-0.0
1,653,898	+		OH686_08120	0.88	+0.4
1,653,898	+		OH686_08120	0.88	-0.3
1,653,898	+		OH686_08120	0.88	-0.2
1,653,898	+		OH686_08120	0.88	-1.9
1,653,898	+		OH686_08120	0.88	-0.4
1,653,898	+		OH686_08120	0.88	-0.3
1,653,898	+		OH686_08120	0.88	-1.1
1,653,898	+		OH686_08120	0.88	-0.7
1,653,898	+		OH686_08120	0.88	-0.1
1,653,899	-		OH686_08120	0.88	+0.2
1,653,899	-		OH686_08120	0.88	+0.4
1,653,899	-		OH686_08120	0.88	+0.6
1,653,899	-		OH686_08120	0.88	+0.9
1,653,899	-		OH686_08120	0.88	-0.4
1,653,899	-		OH686_08120	0.88	-2.3
1,653,899	-		OH686_08120	0.88	+0.1
1,653,899	-		OH686_08120	0.88	+1.2
1,653,899	-		OH686_08120	0.88	-0.1
1,653,899	-		OH686_08120	0.88	-0.3
1,653,899	-		OH686_08120	0.88	-0.8
1,653,899	-		OH686_08120	0.88	+0.8
1,653,926	-				-0.7
1,654,000	+				+0.5
1,654,001	-				+0.3
1,654,048	+				-2.1
1,654,049	-				+2.4
1,654,049	-				-2.7
1,654,049	-				+0.1
1,654,049	-				+0.9
1,654,049	-				+0.1
1,654,076	-				-2.2
1,654,094	+		OH686_08125	0.10	-2.3
1,654,095	-		OH686_08125	0.11	-1.8
1,654,174	+		OH686_08125	0.27	-1.1
1,654,174	+		OH686_08125	0.27	-1.8
1,654,174	+		OH686_08125	0.27	+1.2
1,654,174	+		OH686_08125	0.27	-3.0
1,654,174	+		OH686_08125	0.27	-2.4
1,654,175	-		OH686_08125	0.27	-2.1
1,654,175	-		OH686_08125	0.27	-2.2
1,654,175	-		OH686_08125	0.27	-1.4
1,654,175	-		OH686_08125	0.27	-2.6
1,654,175	-		OH686_08125	0.27	-1.7
1,654,176	+		OH686_08125	0.27	-2.2
1,654,176	+		OH686_08125	0.27	-2.7
1,654,176	+		OH686_08125	0.27	-1.9
1,654,176	+		OH686_08125	0.27	-2.3
1,654,176	+		OH686_08125	0.27	-1.9
1,654,176	+		OH686_08125	0.27	-2.4
1,654,176	+		OH686_08125	0.27	-1.3
1,654,176	+		OH686_08125	0.27	-1.7
1,654,176	+		OH686_08125	0.27	-0.7
1,654,176	+		OH686_08125	0.27	-1.0
1,654,176	+		OH686_08125	0.27	-0.6
1,654,176	+		OH686_08125	0.27	-1.3
1,654,176	+		OH686_08125	0.27	-2.1
1,654,176	+		OH686_08125	0.27	-1.5
1,654,176	+		OH686_08125	0.27	-2.1
1,654,177	-		OH686_08125	0.27	-1.6
1,654,177	-		OH686_08125	0.27	-2.2
1,654,177	-		OH686_08125	0.27	-2.3
1,654,177	-		OH686_08125	0.27	-2.6
1,654,177	-		OH686_08125	0.27	-3.8
1,654,177	-		OH686_08125	0.27	-2.9
1,654,452	+		OH686_08125	0.83	-3.0
1,654,452	+		OH686_08125	0.83	-0.8
1,654,452	+		OH686_08125	0.83	-1.6
1,654,452	+		OH686_08125	0.83	-1.0
1,654,452	+		OH686_08125	0.83	-2.1
1,654,452	+		OH686_08125	0.83	-2.3
1,654,452	+		OH686_08125	0.83	-2.6
1,654,452	+		OH686_08125	0.83	-2.5
1,654,452	+		OH686_08125	0.83	-1.7
1,654,452	+		OH686_08125	0.83	-3.4
1,654,452	+		OH686_08125	0.83	-1.6
1,654,452	+		OH686_08125	0.83	-0.6
1,654,452	+		OH686_08125	0.83	-0.6
1,654,452	+		OH686_08125	0.83	-3.3
1,654,452	+		OH686_08125	0.83	-2.6
1,654,453	-		OH686_08125	0.83	-2.5
1,654,453	-		OH686_08125	0.83	-1.8
1,654,453	-		OH686_08125	0.83	-2.2
1,654,453	-		OH686_08125	0.83	-1.9
1,654,453	-		OH686_08125	0.83	-3.4
1,654,453	-		OH686_08125	0.83	-1.4
1,654,453	-		OH686_08125	0.83	-1.2
1,654,453	-		OH686_08125	0.83	-2.3
1,654,453	-		OH686_08125	0.83	-2.2
1,654,522	+				-2.4
1,654,522	+				-3.2
1,654,522	+				-1.5
1,654,522	+				-2.9
1,654,522	+				-3.0
1,654,522	+				-0.5
1,654,523	-				-2.5
1,654,523	-				+1.0
1,654,523	-				-0.4
1,654,523	-				-1.7
1,654,523	-				-1.4
1,654,523	-				-2.6
1,654,523	-				-2.3
1,654,523	-				-1.0
1,654,523	-				-1.3
1,654,523	-				-2.7
1,654,523	-				-2.8
1,654,523	-				-1.8
1,654,523	-				-1.5
1,654,525	+				-2.3
1,654,525	+				-3.0
1,654,525	+				-1.1
1,654,525	+				+0.0
1,654,525	+				-3.6
1,654,526	-				-2.3
1,654,526	-				-2.1
1,654,526	-				-1.8
1,654,526	-				-2.4
1,654,526	-				-1.4
1,654,526	-				-1.0
1,654,601	+				-3.0
1,654,724	+		OH686_08130	0.11	-1.9
1,654,724	+		OH686_08130	0.11	-0.9
1,654,724	+		OH686_08130	0.11	-2.7
1,654,724	+		OH686_08130	0.11	+0.2
1,654,724	+		OH686_08130	0.11	-2.1
1,654,725	-		OH686_08130	0.11	-0.3
1,654,725	-		OH686_08130	0.11	-1.9
1,654,766	+		OH686_08130	0.13	-0.6
1,654,766	+		OH686_08130	0.13	-2.6
1,654,766	+		OH686_08130	0.13	-3.5
1,654,766	+		OH686_08130	0.13	+0.2
1,654,766	+		OH686_08130	0.13	-0.6
1,654,766	+		OH686_08130	0.13	+0.2
1,654,767	-		OH686_08130	0.13	-1.9
1,654,767	-		OH686_08130	0.13	-1.8
1,654,767	-		OH686_08130	0.13	-3.0
1,654,767	-		OH686_08130	0.13	-2.3
1,654,767	-		OH686_08130	0.13	-2.1
1,654,767	-		OH686_08130	0.13	-2.7
1,654,767	-		OH686_08130	0.13	-1.1
1,654,767	-		OH686_08130	0.13	-1.8
1,654,767	-		OH686_08130	0.13	-1.2
1,654,767	-		OH686_08130	0.13	-2.7
1,654,767	-		OH686_08130	0.13	-0.2
1,654,767	-		OH686_08130	0.13	-1.8
1,654,767	-		OH686_08130	0.13	-2.8
1,654,790	+		OH686_08130	0.15	-0.1
1,654,790	+		OH686_08130	0.15	-2.8
1,654,790	+		OH686_08130	0.15	-1.4
1,654,790	+		OH686_08130	0.15	-1.4
1,654,790	+		OH686_08130	0.15	-2.0
1,654,791	-		OH686_08130	0.15	-1.4
1,654,791	-		OH686_08130	0.15	-1.3
1,654,791	-		OH686_08130	0.15	-3.4
1,654,791	-		OH686_08130	0.15	-2.7
1,654,791	-		OH686_08130	0.15	+0.2
1,654,791	-		OH686_08130	0.15	-1.4
1,654,791	-		OH686_08130	0.15	-3.2
1,654,791	-		OH686_08130	0.15	-2.0
1,654,866	-		OH686_08130	0.19	-1.1
1,654,866	-		OH686_08130	0.19	-1.2
1,654,866	-		OH686_08130	0.19	-1.4
1,655,039	+		OH686_08130	0.29	+0.2
1,655,039	+		OH686_08130	0.29	+0.6
1,655,039	+		OH686_08130	0.29	-1.5
1,655,039	+		OH686_08130	0.29	-1.4
1,655,039	+		OH686_08130	0.29	-2.1
1,655,039	+		OH686_08130	0.29	-2.5
1,655,039	+		OH686_08130	0.29	+0.2
1,655,039	+		OH686_08130	0.29	-1.1
1,655,039	+		OH686_08130	0.29	-2.5
1,655,040	-		OH686_08130	0.29	-3.7
1,655,040	-		OH686_08130	0.29	-2.2
1,655,040	-		OH686_08130	0.29	-2.3
1,655,040	-		OH686_08130	0.29	-1.5
1,655,040	-		OH686_08130	0.29	-1.8
1,655,040	-		OH686_08130	0.29	-3.1
1,655,040	-		OH686_08130	0.29	-2.0
1,655,040	-		OH686_08130	0.29	-2.3
1,655,040	-		OH686_08130	0.29	-3.3
1,655,040	-		OH686_08130	0.29	-2.2
1,655,042	+		OH686_08130	0.30	-2.0
1,655,043	-		OH686_08130	0.30	-1.3
1,655,043	-		OH686_08130	0.30	-1.4
1,655,087	+		OH686_08130	0.32	-1.9
1,655,087	+		OH686_08130	0.32	-2.5
1,655,087	+		OH686_08130	0.32	-2.6
1,655,087	+		OH686_08130	0.32	-0.4
1,655,087	+		OH686_08130	0.32	-3.3
1,655,087	+		OH686_08130	0.32	-2.6
1,655,087	+		OH686_08130	0.32	-0.6
1,655,087	+		OH686_08130	0.32	-1.8
1,655,088	-		OH686_08130	0.32	-0.8
1,655,088	-		OH686_08130	0.32	-0.7
1,655,088	-		OH686_08130	0.32	-1.4
1,655,088	-		OH686_08130	0.32	-2.8
1,655,088	-		OH686_08130	0.32	-0.1
1,655,088	-		OH686_08130	0.32	-2.5
1,655,088	-		OH686_08130	0.32	-1.0
1,655,088	-		OH686_08130	0.32	-3.8
1,655,088	-		OH686_08130	0.32	-1.3
1,655,088	-		OH686_08130	0.32	-2.6
1,655,088	-		OH686_08130	0.32	-0.1
1,655,165	+		OH686_08130	0.37	-0.1
1,655,165	+		OH686_08130	0.37	-0.1
1,655,165	+		OH686_08130	0.37	-1.4
1,655,166	-		OH686_08130	0.37	-1.8
1,655,166	-		OH686_08130	0.37	-0.6
1,655,407	+		OH686_08130	0.51	-2.6
1,655,407	+		OH686_08130	0.51	-2.3
1,655,407	+		OH686_08130	0.51	-1.1
1,655,407	+		OH686_08130	0.51	-1.3
1,655,407	+		OH686_08130	0.51	-2.1
1,655,407	+		OH686_08130	0.51	-2.0
1,655,408	-		OH686_08130	0.51	-1.8
1,655,477	+		OH686_08130	0.55	-2.3
1,655,477	+		OH686_08130	0.55	-1.3
1,655,477	+		OH686_08130	0.55	-3.7
1,655,477	+		OH686_08130	0.55	-0.8
1,655,478	-		OH686_08130	0.55	-2.0
1,655,478	-		OH686_08130	0.55	-0.9
1,655,478	-		OH686_08130	0.55	+0.2
1,655,478	-		OH686_08130	0.55	-2.0
1,655,478	-		OH686_08130	0.55	-1.4
1,655,499	+		OH686_08130	0.56	-1.8
1,655,499	+		OH686_08130	0.56	-1.0
1,655,499	+		OH686_08130	0.56	+1.2
1,655,499	+		OH686_08130	0.56	-0.1
1,655,499	+		OH686_08130	0.56	-3.3
1,655,499	+		OH686_08130	0.56	-2.8
1,655,499	+		OH686_08130	0.56	-2.1
1,655,499	+		OH686_08130	0.56	-3.5
1,655,500	-		OH686_08130	0.56	-1.8
1,655,500	-		OH686_08130	0.56	-3.6
1,655,500	-		OH686_08130	0.56	-2.7
1,655,500	-		OH686_08130	0.56	-1.8